Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023048 Carpinus fangiana HOM05D016283 ORTHO05D016206 0.0e+00 1105.5 545 100.0
Nn003s41391 Nelumbo nucifera HOM05D016283 ORTHO05D016206 1.1e-48 198.7 274 42.7
Nn044s41815 Nelumbo nucifera HOM05D016283 ORTHO05D016206 1.1e-48 198.7 274 42.7
Nn1g09969 Nelumbo nucifera HOM05D016283 ORTHO05D016206 1.1e-48 198.7 274 42.7
Nn1g10049 Nelumbo nucifera HOM05D016283 ORTHO05D016206 1.1e-48 198.7 274 42.7
Nn1g10081 Nelumbo nucifera HOM05D016283 ORTHO05D016206 1.1e-48 198.7 274 42.7
Nn1g10120 Nelumbo nucifera HOM05D016283 ORTHO05D016206 1.1e-48 198.7 274 42.7
Nn1g10145 Nelumbo nucifera HOM05D016283 ORTHO05D016206 1.1e-48 198.7 274 42.7
Dinv06718 Davidia involucrata HOM05D031858 ORTHO05D016206 7.0e-35 152.9 150 51.3
Dinv02150 Davidia involucrata HOM05D031858 ORTHO05D016206 5.0e-33 146.7 306 32.0
Gorai.001G161400 Gossypium raimondii HOM05D031858 ORTHO05D016206 5.1e-25 120.2 124 49.2
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 1.1e-11 75.9 162 32.1
Actinidia34848 Actinidia chinensis HOM05D009586 ORTHO05D010928 1.9e-11 75.1 74 51.4
AUR62017887 Chenopodium quinoa HOM05D003614 ORTHO05D004156 2.5e-08 64.7 137 29.9
SHI13956 Sapria himalayana HOM05D003614 ORTHO05D004156 2.1e-07 61.6 131 29.0
Lj4C836G14 Lonicera japonica HOM05D003614 ORTHO05D004156 2.8e-07 61.2 317 23.7
AUR62003572 Chenopodium quinoa HOM05D003614 ORTHO05D004156 3.6e-07 60.8 180 26.7
Potri.005G063750 Populus trichocarpa HOM05D003614 ORTHO05D004156 3.6e-07 60.8 191 26.7
unitig_8.g4728 Utricularia gibba HOM05D003614 ORTHO05D004156 6.2e-07 60.1 175 28.0
Atru.chr4.881 Acer truncatum HOM05D003614 ORTHO05D004156 8.1e-07 59.7 243 24.7
MSTRG.10382 Avicennia marina HOM05D003614 ORTHO05D004156 8.1e-07 59.7 140 30.0
Sabra05G0053000 Salix brachista HOM05D003614 ORTHO05D004156 8.1e-07 59.7 191 26.2
Rhsim10G0133600 Rhododendron simsii HOM05D003614 ORTHO05D004156 1.1e-06 59.3 203 27.1
AagrBONN_evm.TU.Sc2ySwM_366.1 Anthoceros agrestis HOM05D033855 ORTHO05D031241 2.4e-06 58.2 115 27.8
COL.COLO4_35758 Corchorus olitorius HOM05D003614 ORTHO05D004156 3.1e-06 57.8 194 27.8
DCAR_014331 Daucus carota HOM05D003614 ORTHO05D004156 5.3e-06 57.0 180 27.8
Gohir.D09G211130 Gossypium hirsutum HOM05D003614 ORTHO05D004156 5.3e-06 57.0 190 27.9
Haze_25257 Corylus avellana HOM05D003614 ORTHO05D004156 6.9e-06 56.6 180 28.3
Migut.L01806 Erythranthe guttata HOM05D003614 ORTHO05D004156 6.9e-06 56.6 146 27.4
Gohir.A09G213532 Gossypium hirsutum HOM05D003614 ORTHO05D004156 6.9e-06 56.6 202 25.7
Manes.09G100100 Manihot esculenta HOM05D003614 ORTHO05D004156 6.9e-06 56.6 183 26.8
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 6.9e-06 56.6 133 29.3
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 6.9e-06 56.6 133 29.3
RcHm_v2.0_Chr1g0323821 Rosa chinensis HOM05D003614 ORTHO05D004156 9.0e-06 56.2 188 27.1


User provided reference genes

Program Settings