Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023044 Carpinus fangiana HOM05D003666 ORTHO05D004770 1.6e-67 259.2 128 100.0
Lj2C1223T18 Lonicera japonica HOM05D003666 ORTHO05D004770 4.5e-41 171.4 89 97.8
TAR626G1001 Trochodendron aralioides HOM05D003666 ORTHO05D004770 7.7e-41 170.6 89 96.6
Lsat_1_v5_gn_8_46780 Lactuca sativa HOM05D003666 ORTHO05D004770 2.2e-40 169.1 89 96.6
Aqoxy12s018 Aquilegia oxysepala HOM05D003666 ORTHO05D004770 3.8e-40 168.3 89 95.5
Lalb_Chr00c24g0407401 Lupinus albus HOM05D003666 ORTHO05D004770 6.5e-40 167.5 89 95.5
RcHm_v2.0_MTg0498711 Rosa chinensis HOM05D003666 ORTHO05D004770 6.5e-40 167.5 89 96.6
TPR.G36115 Trifolium pratense HOM05D003666 ORTHO05D004770 6.5e-40 167.5 89 95.5
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 8.5e-40 167.2 88 95.5
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 8.5e-40 167.2 88 95.5
Potri.007G061861 Populus trichocarpa HOM05D003666 ORTHO05D004770 1.9e-39 166.0 89 96.6
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 4.2e-39 164.9 86 96.5
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 3.0e-37 158.7 88 90.9
Ah.10g028200 Amaranthus hybridus HOM05D003666 ORTHO05D004770 5.1e-37 157.9 89 93.3
Ah.10g028750 Amaranthus hybridus HOM05D003666 ORTHO05D004770 5.1e-37 157.9 89 93.3
BcaC05g26880 Brassica carinata HOM05D003666 ORTHO05D004770 5.1e-37 157.9 89 91.0
BNapus_Darmor_BZH_scaffold_234p00230 Brassica napus HOM05D003666 ORTHO05D004770 5.1e-37 157.9 89 91.0
Nitab4.5_0006007g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 4.3e-36 154.8 89 91.0
Solyc00g500172.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.3e-36 154.8 89 91.0
Solyc00g500189.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.3e-36 154.8 89 91.0
Solyc00g500253.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.3e-36 154.8 89 91.0
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 1.3e-35 153.3 103 76.7
Glyma.10G098500 Glycine max HOM05D003666 ORTHO05D004770 4.1e-34 148.3 83 89.2
Dinv06695 Davidia involucrata HOM05D003666 ORTHO05D004770 8.5e-32 140.6 70 98.6
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 1.1e-31 140.2 74 93.2
Lalb_Chr00c54g0413611 Lupinus albus HOM05D003666 ORTHO05D004770 4.2e-31 138.3 71 97.2
arahy.Tifrunner.gnm1.ann1.U43JHG Arachis hypogaea HOM05D003666 ORTHO05D004770 1.2e-30 136.7 70 97.1
arahy.Tifrunner.gnm1.ann1.WXF1XT Arachis hypogaea HOM05D003666 ORTHO05D004770 1.2e-30 136.7 70 97.1
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 2.3e-29 132.5 67 100.0
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 1.5e-28 129.8 66 100.0
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 1.5e-28 129.8 66 100.0
arahy.Tifrunner.gnm1.ann1.AQ5GJP Arachis hypogaea HOM05D003666 ORTHO05D004770 2.6e-28 129.0 71 88.7
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 2.2e-27 125.9 66 97.0
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 2.2e-27 125.9 66 98.5
Lsat_1_v5_gn_3_105380 Lactuca sativa HOM05D003666 ORTHO05D004770 1.1e-26 123.6 65 95.4
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.4e-26 123.2 67 95.5
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 2.4e-26 122.5 71 88.7
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 9.1e-26 120.6 66 95.5
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 1.5e-25 119.8 66 93.9
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.5e-25 119.8 66 93.9
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.3e-24 116.7 74 82.4
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 1.7e-24 116.3 85 75.3
CDE02G1260 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 2.5e-23 112.5 60 96.7
arahy.Tifrunner.gnm1.ann1.W0GCEN Arachis hypogaea HOM05D003666 ORTHO05D004770 5.5e-23 111.3 59 96.6
BraSC48t46269Z Brassica rapa HOM05D003666 ORTHO05D004770 5.5e-23 111.3 63 92.1
BcaC05g26875 Brassica carinata HOM05D003666 ORTHO05D004770 8.0e-22 107.5 61 90.2
BolSC28t60439H Brassica oleracea HOM05D003666 ORTHO05D004770 1.3e-19 100.1 61 83.6
Solyc10g045750.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 5.3e-18 94.7 77 68.8
Phvul.L002937 Phaseolus vulgaris HOM05D003666 ORTHO05D004770 7.0e-18 94.4 62 77.4
Nitab4.5_0000172g0120 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.6e-17 93.2 65 78.5
CARHR288310 Cardamine hirsuta HOM05D003666 ORTHO05D004770 3.8e-16 88.6 47 95.7
Thhalv10015926m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 3.8e-16 88.6 48 91.7
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 6.1e-14 81.3 83 62.7
SHI15675 Sapria himalayana HOM05D003666 ORTHO05D004770 1.8e-13 79.7 71 64.8
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 1.2e-12 77.0 42 92.9
Nitab4.5_0001291g0020 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.4e-10 69.3 60 63.3
SHI36047 Sapria himalayana HOM05D003666 ORTHO05D004770 3.5e-09 65.5 33 90.9
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 1.3e-08 63.5 47 74.5
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 3.8e-08 62.0 42 81.0


User provided reference genes

Program Settings