Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023039 Carpinus fangiana HOM05D008731 ORTHO05D013062 8.3e-179 630.2 300 100.0
Nitab4.5_0006806g0070 Nicotiana tabacum HOM05D008731 ORTHO05D013062 1.9e-45 187.2 138 70.3
Sopen05g012860 Solanum pennellii HOM05D000533 ORTHO05D001069 4.1e-45 186.0 94 90.4
Ca_17160_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 8.9e-40 168.3 149 64.4
Psat0s3560g0080 Pisum sativum HOM05D000533 ORTHO05D002807 3.2e-37 159.8 142 62.7
Sopen12g017210 Solanum pennellii HOM05D000533 ORTHO05D001069 5.6e-34 149.1 137 59.1
TPR.G39518 Trifolium pratense HOM05D008731 ORTHO05D013062 6.4e-22 109.0 55 94.5
Peaxi162Scf00197g00052 Petunia axillaris HOM05D008731 ORTHO05D013062 2.4e-21 107.1 67 82.1
Lsat_1_v5_gn_4_145480 Lactuca sativa HOM05D008731 ORTHO05D013062 2.1e-20 104.0 88 62.5
Solyc00g014850.1 Solanum lycopersicum HOM05D008731 ORTHO05D013062 1.9e-18 97.4 92 59.8
PGSC0003DMG400013206 Solanum tuberosum HOM05D008731 ORTHO05D013062 1.9e-18 97.4 92 59.8
Oeu057347.1 Olea europaea HOM05D008731 ORTHO05D013062 8.1e-17 92.0 65 70.8
Actinidia34823 Actinidia chinensis HOM05D012508 ORTHO05D011743 1.1e-16 91.7 71 63.4
arahy.Tifrunner.gnm1.ann1.18Y7ZR Arachis hypogaea HOM05D012508 ORTHO05D011743 2.4e-16 90.5 67 67.2
arahy.Tifrunner.gnm1.ann1.HN7ZH9 Arachis hypogaea HOM05D012508 ORTHO05D011743 2.4e-16 90.5 67 67.2
arahy.Tifrunner.gnm1.ann1.TXQ6WE Arachis hypogaea HOM05D012508 ORTHO05D011743 2.4e-16 90.5 67 67.2
Dinv06689 Davidia involucrata HOM05D015183 ORTHO05D011743 2.4e-16 90.5 91 56.0
Lj2C1229T26 Lonicera japonica HOM05D012508 ORTHO05D011743 3.1e-16 90.1 42 95.2
Nitab4.5_0000048g0220 Nicotiana tabacum HOM05D008731 ORTHO05D013062 3.1e-16 90.1 90 56.7
Sopen10g026770 Solanum pennellii HOM05D000533 ORTHO05D001069 4.0e-16 89.7 69 69.6
BraSC54t46355Z Brassica rapa HOM05D015026 ORTHO05D011743 5.3e-16 89.4 154 44.2
CDE02G2006 Ceratophyllum demersum HOM05D012508 ORTHO05D011743 5.3e-16 89.4 62 72.6
BolSC28t60326H Brassica oleracea HOM05D007924 ORTHO05D011743 6.9e-16 89.0 58 75.9
arahy.Tifrunner.gnm1.ann1.92IF5I Arachis hypogaea HOM05D012508 ORTHO05D011743 9.0e-16 88.6 47 89.4
arahy.Tifrunner.gnm1.ann1.BEZ08J Arachis hypogaea HOM05D012508 ORTHO05D011743 9.0e-16 88.6 47 89.4
BraSC159t45717Z Brassica rapa HOM05D007924 ORTHO05D010328 9.0e-16 88.6 39 100.0
CsaV3_6G024130 Cucumis sativus L. HOM05D012508 ORTHO05D011743 1.5e-15 87.8 40 97.5
Nitab4.5_0001919g0060 Nicotiana tabacum HOM05D012508 ORTHO05D011743 7.6e-15 85.5 40 95.0
Sopen01g027220 Solanum pennellii HOM05D012508 ORTHO05D011743 1.3e-14 84.7 140 41.4
Nitab4.5_0002287g0120 Nicotiana tabacum HOM05D008731 ORTHO05D013062 3.8e-14 83.2 81 55.6
Lsat_1_v5_gn_7_67821 Lactuca sativa HOM05D000533 ORTHO05D001069 6.4e-14 82.4 40 92.5
TAR371G0571 Trochodendron aralioides HOM05D008731 ORTHO05D013062 7.1e-13 79.0 35 94.3
Nitab4.5_0001127g0340 Nicotiana tabacum HOM05D008731 ORTHO05D013062 1.8e-11 74.3 35 88.6
SalBow1G4437 Salvia bowleyana HOM05D008731 ORTHO05D013062 1.8e-11 74.3 35 91.4
Nitab4.5_0007578g0070 Nicotiana tabacum HOM05D012508 ORTHO05D011743 8.7e-11 72.0 61 63.9
Dinv36131 Davidia involucrata HOM05D008731 ORTHO05D013062 2.5e-10 70.5 35 88.6
Nitab4.5_0001153g0070 Nicotiana tabacum HOM05D008731 ORTHO05D013062 9.6e-10 68.6 100 46.0
Psat0s922g0120 Pisum sativum HOM05D008731 ORTHO05D013062 2.8e-09 67.0 30 96.7
arahy.Tifrunner.gnm1.ann1.1L0IZB Arachis hypogaea HOM05D011739 ORTHO05D012473 9.9e-07 58.5 29 82.8
arahy.Tifrunner.gnm1.ann1.6RYL9Q Arachis hypogaea HOM05D011739 ORTHO05D012473 9.9e-07 58.5 29 82.8
arahy.Tifrunner.gnm1.ann1.9N3TY2 Arachis hypogaea HOM05D011739 ORTHO05D012473 9.9e-07 58.5 29 82.8
arahy.Tifrunner.gnm1.ann1.K3NN1X Arachis hypogaea HOM05D011739 ORTHO05D012473 9.9e-07 58.5 29 82.8
arahy.Tifrunner.gnm1.ann1.MR2GU4 Arachis hypogaea HOM05D011739 ORTHO05D012473 9.9e-07 58.5 29 82.8
arahy.Tifrunner.gnm1.ann1.RHH2VU Arachis hypogaea HOM05D011739 ORTHO05D012473 9.9e-07 58.5 29 82.8
arahy.Tifrunner.gnm1.ann1.SB3U1B Arachis hypogaea HOM05D011739 ORTHO05D012473 9.9e-07 58.5 29 82.8
arahy.Tifrunner.gnm1.ann1.YHR8J4 Arachis hypogaea HOM05D011739 ORTHO05D012473 9.9e-07 58.5 29 82.8
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 8.4e-06 55.5 34 73.5


User provided reference genes

Program Settings