Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023012 Carpinus fangiana HOM05D009026 ORTHO05D011369 1.7e-48 195.7 96 100.0
QL10p061779 Quercus lobata HOM05D009026 ORTHO05D011369 1.4e-31 139.4 67 95.5
Sopen05g012660 Solanum pennellii HOM05D009026 ORTHO05D011369 6.6e-29 130.6 67 91.0
Cpa.g.sc263.3 Carica papaya HOM05D009026 ORTHO05D011369 1.5e-28 129.4 62 98.4
Glyma.17G185400 Glycine max HOM05D009026 ORTHO05D011369 3.3e-28 128.3 66 93.9
LjContig00315g0016791 Lotus japonicus HOM05D009026 ORTHO05D011369 2.3e-26 122.1 63 95.2
LjContig00315g0017150 Lotus japonicus HOM05D009026 ORTHO05D011369 2.3e-26 122.1 63 95.2
MELO3C005270.2 Cucumis melo HOM05D009026 ORTHO05D011369 6.8e-26 120.6 62 91.9
MELO3C033786.2 Cucumis melo HOM05D009026 ORTHO05D011369 6.8e-26 120.6 62 91.9
Psat3g040200 Pisum sativum HOM05D009026 ORTHO05D011369 6.8e-26 120.6 59 94.9
TPR.G20553 Trifolium pratense HOM05D009026 ORTHO05D011369 6.8e-26 120.6 59 94.9
Nitab4.5_0004300g0210 Nicotiana tabacum HOM05D009026 ORTHO05D011369 8.9e-26 120.2 69 82.6
Sopen05g012650 Solanum pennellii HOM05D009026 ORTHO05D011369 8.9e-26 120.2 69 84.1
HPP92_026906 Vanilla planifolia HOM05D009026 ORTHO05D011369 3.4e-25 118.2 65 84.6
Nitab4.5_0000161g0010 Nicotiana tabacum HOM05D009026 ORTHO05D011369 8.3e-24 113.6 77 72.7
PGSC0003DMG400017855 Solanum tuberosum HOM05D009026 ORTHO05D011369 2.4e-23 112.1 67 77.6
CDE02G0817 Ceratophyllum demersum HOM05D009026 ORTHO05D011369 5.1e-21 104.4 51 94.1
MELO3C033787.2 Cucumis melo HOM05D009026 ORTHO05D011369 4.3e-20 101.3 62 79.0
Nitab4.5_0001702g0040 Nicotiana tabacum HOM05D009026 ORTHO05D011369 4.3e-20 101.3 56 83.9
MELO3C033550.2 Cucumis melo HOM05D009026 ORTHO05D011369 5.6e-20 100.9 59 81.4
Nitab4.5_0001922g0040 Nicotiana tabacum HOM05D009026 ORTHO05D011369 2.8e-19 98.6 55 83.6
Peaxi162Scf00651g00613 Petunia axillaris HOM05D009026 ORTHO05D011369 3.6e-19 98.2 67 76.1
Nitab4.5_0000866g0200 Nicotiana tabacum HOM05D009026 ORTHO05D011369 6.2e-19 97.4 57 82.5
ATR0609G099 Amborella trichopoda HOM05D009026 ORTHO05D011369 6.8e-18 94.0 56 78.6
Solyc07g017930.1 Solanum lycopersicum HOM05D009026 ORTHO05D011369 5.1e-13 77.8 45 77.8


User provided reference genes

Program Settings