Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023003 Carpinus fangiana HOM05D001966 ORTHO05D011119 4.5e-85 317.8 148 100.0
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 2.7e-66 255.4 124 95.2
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 4.4e-64 248.1 124 94.4
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.6e-61 239.6 124 90.3
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 1.1e-59 233.4 116 95.7
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 1.6e-53 213.0 98 99.0
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 1.0e-52 210.3 142 76.1
arahy.Tifrunner.gnm1.ann1.KT8FLV Arachis hypogaea HOM05D001966 ORTHO05D011119 4.2e-51 204.9 98 94.9
arahy.Tifrunner.gnm1.ann1.2KV113 Arachis hypogaea HOM05D000580 ORTHO05D011119 1.4e-49 199.9 98 92.9
arahy.Tifrunner.gnm1.ann1.1DF8CR Arachis hypogaea HOM05D001966 ORTHO05D011119 3.4e-48 195.3 91 97.8
ScUNg0000270 Simmondsia chinensis HOM05D001966 ORTHO05D011119 9.8e-48 193.7 124 78.2
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 3.7e-47 191.8 87 100.0
arahy.Tifrunner.gnm1.ann1.KXW2A6 Arachis hypogaea HOM05D001966 ORTHO05D011119 1.5e-43 179.9 86 96.5
Gohir.1Z049692 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.0e-36 157.1 72 100.0
Gohir.1Z050866 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.0e-36 157.1 72 100.0
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 1.0e-36 157.1 220 42.3
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 2.9e-36 155.6 86 83.7
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 3.8e-36 155.2 72 98.6
Gohir.A01G119800 Gossypium hirsutum HOM05D001966 ORTHO05D011119 8.6e-36 154.1 72 98.6
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 1.1e-35 153.7 76 96.1
Gohir.D02G156751 Gossypium hirsutum HOM05D001966 ORTHO05D011119 4.3e-35 151.8 75 93.3
Gohir.A10G178000 Gossypium hirsutum HOM05D001966 ORTHO05D011119 7.3e-35 151.0 72 95.8
Hma1.2p1_0051F.1_g029255 Hydrangea macrophylla HOM05D001966 ORTHO05D011119 1.6e-34 149.8 72 94.4
Gorai.005G175800 Gossypium raimondii HOM05D001966 ORTHO05D011119 2.8e-34 149.1 75 92.0
Potri.011G074067 Populus trichocarpa HOM05D001966 ORTHO05D011119 3.6e-34 148.7 72 95.8
Gorai.007G237900 Gossypium raimondii HOM05D001966 ORTHO05D011119 6.1e-34 147.9 72 94.4
Phvul.001G037800 Phaseolus vulgaris HOM05D001966 ORTHO05D011119 4.4e-32 141.7 72 90.3
Gohir.A05G366050 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.4e-30 136.0 70 88.6
Gohir.D05G230250 Gossypium hirsutum HOM05D001966 ORTHO05D011119 3.2e-30 135.6 72 84.7
Sc09g0006250 Simmondsia chinensis HOM05D002578 ORTHO05D005154 6.0e-29 131.3 111 64.9
arahy.Tifrunner.gnm1.ann1.MHEL4J Arachis hypogaea HOM05D001966 ORTHO05D011119 1.7e-28 129.8 72 88.9
Glyma.11G218300 Glycine max HOM05D001966 ORTHO05D011119 8.6e-28 127.5 82 78.0
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 3.3e-27 125.6 59 98.3
BcaNung07086 Brassica carinata HOM05D001966 ORTHO05D011119 4.3e-27 125.2 58 100.0
arahy.Tifrunner.gnm1.ann1.FF8QKQ Arachis hypogaea HOM05D001966 ORTHO05D011119 5.6e-27 124.8 75 82.7
Manes.13G063850 Manihot esculenta HOM05D001966 ORTHO05D011119 1.5e-24 116.7 73 76.7
TPR.G40147 Trifolium pratense HOM05D003168 ORTHO05D011119 3.4e-24 115.5 76 69.7
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 1.3e-23 113.6 61 88.5
Migut.B01248 Erythranthe guttata HOM05D001966 ORTHO05D011119 1.7e-23 113.2 69 81.2
Gohir.A04G110920 Gossypium hirsutum HOM05D001966 ORTHO05D011119 6.4e-23 111.3 72 72.2
Gohir.A04G110980 Gossypium hirsutum HOM05D001966 ORTHO05D011119 6.4e-23 111.3 72 72.2
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 1.9e-22 109.8 62 82.3
ECA246G3863 Erigeron canadensis HOM05D002697 ORTHO05D003087 1.0e-20 104.0 49 93.9
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 1.5e-16 90.1 45 95.6
Sc05g0009610 Simmondsia chinensis HOM05D001966 ORTHO05D011119 9.9e-16 87.4 42 97.6
Nitab4.5_0000289g0040 Nicotiana tabacum HOM05D001966 ORTHO05D011119 2.2e-15 86.3 47 78.7
Sopen04g018020 Solanum pennellii HOM05D001966 ORTHO05D011119 5.6e-11 71.6 44 84.1
arahy.Tifrunner.gnm1.ann1.CSY78X Arachis hypogaea HOM05D000216 ORTHO05D000634 1.8e-09 66.6 33 84.8
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.2e-08 63.9 66 53.0
Nitab4.5_0003550g0060 Nicotiana tabacum HOM05D001966 ORTHO05D011119 5.8e-08 61.6 23 100.0
EL10As15g24133 Beta vulgaris HOM05D004182 ORTHO05D007321 1.7e-07 60.1 27 100.0
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 4.9e-07 58.5 26 100.0
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BolSC35t60712H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BolSC44t60815H Brassica oleracea HOM05D004182 ORTHO05D010127 4.9e-07 58.5 26 100.0
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BraSC103t45421Z Brassica rapa HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BraSC103t45434Z Brassica rapa HOM05D004182 ORTHO05D010127 4.9e-07 58.5 26 100.0
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BraSC143t45651Z Brassica rapa HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BraSC25t45903Z Brassica rapa HOM05D004182 ORTHO05D010127 4.9e-07 58.5 26 100.0
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BraSC58t46465Z Brassica rapa HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
BraSC59t46507Z Brassica rapa HOM05D004182 ORTHO05D010127 4.9e-07 58.5 26 100.0
BraSC59t46527Z Brassica rapa HOM05D004182 ORTHO05D010127 4.9e-07 58.5 26 100.0
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 4.9e-07 58.5 26 100.0
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.9e-07 58.5 27 96.3
A08p09050 Brassica napus HOM05D001966 ORTHO05D010127 1.4e-06 57.0 27 96.3
BraSC59t46543Z Brassica rapa HOM05D004182 ORTHO05D007321 7.1e-06 54.7 24 100.0


User provided reference genes

Program Settings