Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 2.7e-180 635.2 312 100.0
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 2.0e-111 406.4 208 94.7
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 1.1e-101 374.0 208 87.0
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 4.7e-100 368.6 202 88.6
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 2.2e-94 349.7 201 82.1
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 8.5e-94 347.8 204 81.4
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 8.5e-94 347.8 214 78.0
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 3.2e-93 345.9 201 81.6
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 3.2e-93 345.9 236 72.5
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 5.5e-93 345.1 203 82.8
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 7.2e-93 344.7 214 78.0
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.2e-92 344.0 208 79.8
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 2.1e-92 343.2 204 79.9
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 2.1e-92 343.2 204 79.4
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 6.1e-92 341.7 205 79.5
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 1.4e-91 340.5 213 76.5
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 1.8e-91 340.1 208 78.8
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 5.2e-91 338.6 201 80.1
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 5.2e-91 338.6 232 69.8
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 8.8e-91 337.8 204 79.9
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 4.4e-90 335.5 204 78.4
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 7.5e-90 334.7 207 77.3
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 2.2e-89 333.2 201 79.1
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 4.8e-89 332.0 239 64.4
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 1.1e-88 330.9 201 78.1
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.4e-88 330.5 201 78.6
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 1.4e-88 330.5 204 77.5
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.8e-88 330.1 204 76.5
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.4e-88 329.7 200 78.5
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 3.1e-88 329.3 204 76.5
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 7.0e-88 328.2 204 73.0
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.2e-87 327.4 219 72.6
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 1.2e-87 327.4 200 76.5
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 1.6e-87 327.0 204 73.5
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 4.5e-87 325.5 219 68.9
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 4.5e-87 325.5 200 77.0
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 4.5e-87 325.5 230 67.4
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 7.7e-87 324.7 200 74.0
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.2e-86 323.2 200 76.5
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.9e-86 322.8 229 66.8
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 3.8e-86 322.4 204 74.5
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 5.0e-86 322.0 200 73.0
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 6.5e-86 321.6 200 73.5
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 6.5e-86 321.6 200 73.5
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.1e-85 320.9 230 64.8
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 1.9e-85 320.1 204 76.5
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 1.9e-85 320.1 198 77.3
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.9e-85 320.1 198 75.3
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 4.2e-85 318.9 204 73.5
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 4.2e-85 318.9 209 71.8
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 9.5e-85 317.8 198 74.7
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 1.2e-84 317.4 200 73.0
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 1.6e-84 317.0 235 66.0
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 2.1e-84 316.6 204 73.5
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 2.1e-84 316.6 189 77.8
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 2.1e-84 316.6 204 73.0
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 2.8e-84 316.2 200 73.5
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 4.7e-84 315.5 214 71.0
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 8.0e-84 314.7 200 75.5
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 2.3e-83 313.2 200 75.0
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 2.3e-83 313.2 198 75.8
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 5.2e-83 312.0 187 80.2
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 1.2e-82 310.8 200 75.5
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 1.2e-82 310.8 199 75.9
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 2.0e-82 310.1 202 75.2
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 3.4e-82 309.3 203 70.0
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 7.5e-82 308.1 201 76.1
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.3e-81 307.4 209 72.7
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.3e-81 307.4 202 74.3
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.7e-81 307.0 201 70.6
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.7e-81 307.0 203 72.9
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 2.8e-81 306.2 201 69.7
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 3.7e-81 305.8 202 73.3
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 8.3e-81 304.7 236 64.8
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 4.5e-79 298.9 203 71.4
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 1.3e-78 297.4 219 69.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.3e-78 297.4 201 68.7
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.9e-78 296.2 204 70.1
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 5.0e-78 295.4 197 71.1
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 6.6e-78 295.0 203 67.5
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 6.6e-78 295.0 280 56.8
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 1.5e-77 293.9 203 68.0
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.3e-77 292.7 245 60.0
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 4.3e-77 292.4 200 68.0
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 5.6e-77 292.0 202 67.8
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 6.1e-76 288.5 200 68.5
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.4e-75 287.3 235 59.6
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.2e-74 284.3 182 75.3
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.3e-73 280.8 195 67.7
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.8e-72 276.9 197 66.5
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 9.2e-72 274.6 202 66.3
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 5.0e-70 268.9 214 60.7
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 3.3e-69 266.2 181 70.2
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 2.1e-68 263.5 174 75.3
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 6.2e-68 261.9 179 74.3
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.4e-67 260.8 198 63.6
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 1.8e-67 260.4 198 60.6
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 1.4e-64 250.8 160 75.0
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 9.5e-61 238.0 133 81.2
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 7.5e-58 228.4 138 76.1
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 1.7e-57 227.3 205 51.2
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 4.7e-52 209.1 120 80.0
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 4.7e-52 209.1 181 61.9
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.3e-46 191.0 172 52.3
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 8.6e-46 188.3 110 80.0
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.1e-43 181.4 113 77.0
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 6.9e-43 178.7 107 75.7
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 1.9e-40 170.6 111 76.6
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 8.1e-36 155.2 91 75.8
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.8e-35 154.1 86 81.4
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.4e-35 153.7 94 79.8
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 1.3e-30 137.9 90 74.4
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 3.0e-30 136.7 84 76.2
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 1.9e-29 134.0 119 63.0
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 6.2e-28 129.0 91 68.1
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 1.2e-26 124.8 84 75.0
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 2.4e-24 117.1 88 64.8
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 6.0e-23 112.5 70 71.4
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 8.7e-22 108.6 86 58.1
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 5.6e-21 105.9 79 59.5
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 2.4e-19 100.5 65 70.8
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 9.3e-16 88.6 67 67.2
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.2e-15 88.2 68 61.8
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 3.1e-11 73.6 52 73.1


User provided reference genes

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