Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022886 Carpinus fangiana HOM05D005360 ORTHO05D006501 0.0e+00 1187.2 583 100.0
Cfa021961 Carpinus fangiana HOM05D000182 ORTHO05D006501 1.9e-17 95.1 147 36.1
SalBow6G0303 Salvia bowleyana HOM05D005360 ORTHO05D006501 2.2e-10 71.6 228 29.4
MD11G1152100 Malus domestica HOM05D005360 ORTHO05D006501 1.4e-09 68.9 228 28.5
TPR.G32397 Trifolium pratense HOM05D005360 ORTHO05D006501 1.9e-09 68.6 213 27.7
Glyma.13G219600 Glycine max HOM05D005360 ORTHO05D006501 7.1e-09 66.6 213 26.3
Zm00001eb345720 Zea mays HOM05D005360 ORTHO05D006501 9.3e-09 66.2 211 28.4
Phvul.006G166300 Phaseolus vulgaris HOM05D005360 ORTHO05D006501 1.2e-08 65.9 211 27.5
MSTRG.21078 Avicennia marina HOM05D005360 ORTHO05D006501 7.8e-08 63.2 221 26.2
SGA_v2.0_scaffold193G40720 Striga asiatica HOM05D005360 ORTHO05D006501 7.8e-08 63.2 214 27.6
Atru.chr3.3432 Acer truncatum HOM05D005360 ORTHO05D006501 1.0e-07 62.8 214 28.5
Cc04_g14880 Coffea canephora HOM05D005360 ORTHO05D006501 1.0e-07 62.8 220 27.7
FvH4_3g30230 Fragaria vesca HOM05D005360 ORTHO05D006501 1.3e-07 62.4 211 28.0
HPP92_015033 Vanilla planifolia HOM05D005360 ORTHO05D006501 1.3e-07 62.4 209 25.8
TWI31G0773 Tripterygium wilfordii HOM05D005360 ORTHO05D006501 1.7e-07 62.0 213 28.2
Ca_01695_v3 Cicer arietinum L. HOM05D005360 ORTHO05D006501 3.0e-07 61.2 215 27.9
FAN21G0874 Fragaria x ananassa HOM05D005360 ORTHO05D006501 3.0e-07 61.2 209 27.8
Psat5g252440 Pisum sativum HOM05D005360 ORTHO05D006501 3.0e-07 61.2 213 26.3
DCAR_015495 Daucus carota HOM05D005360 ORTHO05D006501 3.9e-07 60.8 211 28.4
Sopen11g026340 Solanum pennellii HOM05D005360 ORTHO05D006501 3.9e-07 60.8 213 28.6
CDE09G0858 Ceratophyllum demersum HOM05D005360 ORTHO05D006501 5.1e-07 60.5 212 28.3
FAN11G3336 Fragaria x ananassa HOM05D005360 ORTHO05D006501 5.1e-07 60.5 209 27.8
CANSAT64G2904 Cannabis sativa HOM05D005360 ORTHO05D006501 6.6e-07 60.1 222 27.5
PGSC0003DMG400000427 Solanum tuberosum HOM05D005360 ORTHO05D006501 6.6e-07 60.1 213 28.2
Nitab4.5_0000442g0050 Nicotiana tabacum HOM05D005360 ORTHO05D006501 8.7e-07 59.7 213 27.7
PSO339G5504 Papaver somniferum HOM05D005360 ORTHO05D006501 8.7e-07 59.7 215 28.8
RcHm_v2.0_Chr5g0056101 Rosa chinensis HOM05D005360 ORTHO05D006501 8.7e-07 59.7 215 26.5
Ah.01g016120 Amaranthus hybridus HOM05D005360 ORTHO05D006501 1.5e-06 58.9 212 26.4
CSS0014580 Camellia sinensis var. sinensis HOM05D005360 ORTHO05D006501 1.5e-06 58.9 227 26.9
CANSAT64G2995 Cannabis sativa HOM05D005360 ORTHO05D006501 1.9e-06 58.5 223 26.9
Thecc.09G295200 Theobroma cacao HOM05D005360 ORTHO05D006501 1.9e-06 58.5 209 27.3
TAR633G1180 Trochodendron aralioides HOM05D005360 ORTHO05D006501 1.9e-06 58.5 216 26.9
PSO063G2369 Papaver somniferum HOM05D005360 ORTHO05D006501 2.5e-06 58.2 216 29.2
Rhsim13G0102900 Rhododendron simsii HOM05D005360 ORTHO05D006501 2.5e-06 58.2 212 27.4
Medtr2g084545 Medicago truncatula HOM05D005360 ORTHO05D006501 3.3e-06 57.8 211 25.6
Solyc11g066610.2 Solanum lycopersicum HOM05D005360 ORTHO05D006501 4.3e-06 57.4 213 27.7
vmacro03239 Vaccinium macrocarpon HOM05D005360 ORTHO05D006501 4.3e-06 57.4 210 28.1
Phvul.001G193500 Phaseolus vulgaris HOM05D000182 ORTHO05D000112 5.6e-06 57.0 114 35.1
Lj5g0009078 Lotus japonicus HOM05D000182 ORTHO05D000112 9.6e-06 56.2 125 35.2


User provided reference genes

Program Settings