Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022813 Carpinus fangiana HOM05D005165 ORTHO05D006361 0.0e+00 2026.5 1050 100.0
PRCOL_00000773 Prasinoderma coloniale HOM05D005165 ORTHO05D006361 5.5e-20 104.4 695 23.7
Mapoly0043s0047 Marchantia polymorpha HOM05D005165 ORTHO05D006361 2.4e-15 89.0 385 27.3
MCO03G113 Micromonas commoda HOM05D005165 ORTHO05D006361 4.5e-14 84.7 742 22.8
Thhalv10024235m.g Eutrema salsugineum HOM05D005165 ORTHO05D006361 4.2e-12 78.2 231 28.6
Carub.0007s1958 Capsella rubella HOM05D005165 ORTHO05D006361 9.5e-12 77.0 231 28.6
MD10G1319300 Malus domestica HOM05D005165 ORTHO05D006361 2.1e-11 75.9 234 30.3
Pp3c24_1350 Physcomitrium patens HOM05D005165 ORTHO05D006361 3.6e-11 75.1 341 25.5
A01p13150 Brassica napus HOM05D005165 ORTHO05D006361 4.7e-11 74.7 231 28.1
BraA01t01259Z Brassica rapa HOM05D005165 ORTHO05D006361 4.7e-11 74.7 231 28.1
BolC1t01538H Brassica oleracea HOM05D005165 ORTHO05D006361 1.0e-10 73.6 231 28.1
AT4G21820 Arabidopsis thaliana HOM05D005165 ORTHO05D006361 1.4e-10 73.2 374 25.4
THA.LOC104813036 Tarenaya hassleriana HOM05D005165 ORTHO05D006361 1.8e-10 72.8 231 27.7
Sp7g19990 Schrenkiella parvula HOM05D005165 ORTHO05D006361 3.0e-10 72.0 231 26.4
BcaC09g51197 Brassica carinata HOM05D005165 ORTHO05D006361 6.8e-10 70.9 231 27.7
C01p15840 Brassica napus HOM05D005165 ORTHO05D006361 6.8e-10 70.9 231 27.7
Aqoxy1G03259 Aquilegia oxysepala HOM05D005165 ORTHO05D006361 8.8e-10 70.5 229 28.4
HanXRQChr05g0129591 Helianthus annuus HOM05D005165 ORTHO05D006361 8.8e-10 70.5 343 24.5
CARHR228530 Cardamine hirsuta HOM05D005165 ORTHO05D006361 1.2e-09 70.1 231 27.3
AagrBONN_evm.TU.Sc2ySwM_117.1637__1638 Anthoceros agrestis HOM05D005165 ORTHO05D006361 1.5e-09 69.7 420 25.7
Ca_21091_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 1.5e-09 69.7 231 29.0
Ca_30199_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 1.5e-09 69.7 231 29.0
TPR.G37081 Trifolium pratense HOM05D005165 ORTHO05D006361 2.6e-09 68.9 231 28.6
AL7G32110 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 3.4e-09 68.6 399 22.6
Thecc.06G218200 Theobroma cacao HOM05D005165 ORTHO05D006361 3.4e-09 68.6 229 27.5
CANSAT56G1527 Cannabis sativa HOM05D005165 ORTHO05D006361 5.7e-09 67.8 400 23.5
SGA_v2.0_scaffold4G01924 Striga asiatica HOM05D005165 ORTHO05D006361 5.7e-09 67.8 342 26.3
Medtr4g131940 Medicago truncatula HOM05D005165 ORTHO05D006361 7.5e-09 67.4 231 28.1
MSTRG.15978 Avicennia marina HOM05D005165 ORTHO05D006361 9.8e-09 67.0 296 28.7
Peaxi162Scf00262g00611 Petunia axillaris HOM05D005165 ORTHO05D006361 9.8e-09 67.0 229 26.6
ATR0752G018 Amborella trichopoda HOM05D005165 ORTHO05D006361 1.3e-08 66.6 230 26.1
CSS0001066 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.3e-08 66.6 231 28.1
Lj2C270G14 Lonicera japonica HOM05D005165 ORTHO05D006361 1.3e-08 66.6 253 26.5
unitig_748.g7100 Utricularia gibba HOM05D005165 ORTHO05D006361 1.3e-08 66.6 229 28.8
Nitab4.5_0003254g0110 Nicotiana tabacum HOM05D005165 ORTHO05D006361 1.7e-08 66.2 325 24.0
QL05p073800 Quercus lobata HOM05D005165 ORTHO05D006361 1.7e-08 66.2 231 29.0
TWI63G0677 Tripterygium wilfordii HOM05D005165 ORTHO05D006361 1.7e-08 66.2 231 29.0
Cfa000241 Carpinus fangiana HOM05D005165 ORTHO05D006361 2.2e-08 65.9 567 22.0
Nn1g03565 Nelumbo nucifera HOM05D005165 ORTHO05D006361 2.2e-08 65.9 533 23.3
TAR627G0931 Trochodendron aralioides HOM05D005165 ORTHO05D006361 2.2e-08 65.9 232 27.2
GSVIVG01002377001 Vitis vinifera HOM05D005165 ORTHO05D006361 2.2e-08 65.9 234 28.6
Ciclev10014034m.g Citrus clementina HOM05D005165 ORTHO05D006361 2.8e-08 65.5 231 28.1
Lalb_Chr01g0014921 Lupinus albus HOM05D005165 ORTHO05D006361 2.8e-08 65.5 229 28.8
DCAR_004209 Daucus carota HOM05D005165 ORTHO05D006361 3.7e-08 65.1 229 27.9
Dinv13878 Davidia involucrata HOM05D005165 ORTHO05D006361 3.7e-08 65.1 342 24.9
Gohir.D10G013600 Gossypium hirsutum HOM05D005165 ORTHO05D006361 3.7e-08 65.1 231 26.8
Sopen02g025090 Solanum pennellii HOM05D005165 ORTHO05D006361 3.7e-08 65.1 231 27.3
Gohir.A06G147800 Gossypium hirsutum HOM05D005165 ORTHO05D006361 4.9e-08 64.7 231 25.1
Lj4g0017916 Lotus japonicus HOM05D005165 ORTHO05D006361 4.9e-08 64.7 231 27.7
MBI02_g22104_MAGBIO Magnolia biondii HOM05D005165 ORTHO05D006361 4.9e-08 64.7 296 26.0
Sc17g0007260 Simmondsia chinensis HOM05D005165 ORTHO05D006361 4.9e-08 64.7 351 24.5
COL.COLO4_31753 Corchorus olitorius HOM05D005165 ORTHO05D006361 6.3e-08 64.3 233 26.6
RcHm_v2.0_Chr5g0003561 Rosa chinensis HOM05D005165 ORTHO05D006361 6.3e-08 64.3 561 21.6
vmacro03694 Vaccinium macrocarpon HOM05D005165 ORTHO05D006361 6.3e-08 64.3 229 27.5
Gohir.D06G153700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 8.3e-08 63.9 231 26.0
Psat4g007280 Pisum sativum HOM05D005165 ORTHO05D006361 8.3e-08 63.9 231 28.1
Nitab4.5_0007482g0050 Nicotiana tabacum HOM05D005165 ORTHO05D006361 1.4e-07 63.2 205 27.8
Phvul.003G077600 Phaseolus vulgaris HOM05D005165 ORTHO05D006361 1.4e-07 63.2 229 27.9
CiPaw.09G089900 Carya illinoinensis HOM05D005165 ORTHO05D006361 1.8e-07 62.8 229 26.2
PGR004G2872 Punica granatum HOM05D005165 ORTHO05D006361 1.8e-07 62.8 232 28.0
Gorai.010G179700 Gossypium raimondii HOM05D005165 ORTHO05D006361 2.4e-07 62.4 231 25.5
AUR62021974 Chenopodium quinoa HOM05D005165 ORTHO05D006361 3.1e-07 62.0 343 24.5
Zm00001eb322760 Zea mays HOM05D005165 ORTHO05D006361 4.1e-07 61.6 402 25.6
Ah.09g235020 Amaranthus hybridus HOM05D005165 ORTHO05D006361 9.2e-07 60.5 235 27.2
AUR62012682 Chenopodium quinoa HOM05D005165 ORTHO05D006361 1.2e-06 60.1 346 24.6
Haze_06780 Corylus avellana HOM05D005165 ORTHO05D006361 1.2e-06 60.1 461 22.1
Manes.17G037700 Manihot esculenta HOM05D005165 ORTHO05D006361 1.2e-06 60.1 233 27.0
PSO541G6479 Papaver somniferum HOM05D005165 ORTHO05D006361 1.2e-06 60.1 342 24.0
Hund23483 Selenicereus undatus HOM05D005165 ORTHO05D006361 1.2e-06 60.1 303 26.1
BcaNung02250 Brassica carinata HOM05D005165 ORTHO05D006361 1.6e-06 59.7 597 22.9
Prupe.4G023200 Prunus persica HOM05D005165 ORTHO05D006361 1.6e-06 59.7 386 24.1
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 1.6e-06 59.7 231 27.3
Atru.chr10.2199 Acer truncatum HOM05D005165 ORTHO05D006361 2.0e-06 59.3 175 27.4
Sabra04G0009600 Salix brachista HOM05D005165 ORTHO05D006361 2.0e-06 59.3 231 26.4
HPP92_012319 Vanilla planifolia HOM05D005165 ORTHO05D006361 2.0e-06 59.3 231 26.8
Glyma.07G259400 Glycine max HOM05D005165 ORTHO05D006361 2.7e-06 58.9 229 27.1
PSO675G7058 Papaver somniferum HOM05D005165 ORTHO05D006361 2.7e-06 58.9 342 23.7
CSS0020297 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 3.5e-06 58.5 198 27.3
Glyma.17G014900 Glycine max HOM05D005165 ORTHO05D006361 3.5e-06 58.5 229 26.2
ClCG03G004830 Citrullus lanatus HOM05D005165 ORTHO05D006361 5.9e-06 57.8 175 31.4
CDE05G2160 Ceratophyllum demersum HOM05D005165 ORTHO05D006361 7.7e-06 57.4 197 29.4
Duzib235G1549 Durio zibethinus HOM05D005165 ORTHO05D006361 7.7e-06 57.4 368 23.4
Sed0027912 Sechium edule HOM05D005165 ORTHO05D006361 7.7e-06 57.4 175 30.9
Solyc02g080390.2 Solanum lycopersicum HOM05D005165 ORTHO05D006361 7.7e-06 57.4 419 22.7


User provided reference genes

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