Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022797 Carpinus fangiana HOM05D004272 ORTHO05D005020 0.0e+00 1132.1 570 100.0
Cre12.g524450 Chlamydomonas reinhardtii HOM05D004272 ORTHO05D005020 2.5e-27 127.9 297 31.0
Haze_26606 Corylus avellana HOM05D004272 ORTHO05D005020 2.2e-23 114.8 288 31.9
Mapoly0167s0026 Marchantia polymorpha HOM05D004272 ORTHO05D005020 8.4e-23 112.8 286 27.3
Pp3c3_2290 Physcomitrium patens HOM05D004272 ORTHO05D005020 1.6e-21 108.6 289 28.7
BcaC08g46620 Brassica carinata HOM05D004272 ORTHO05D005020 3.0e-20 104.4 292 28.1
BolC6t39646H Brassica oleracea HOM05D004272 ORTHO05D005020 3.0e-20 104.4 292 28.1
C06p45930 Brassica napus HOM05D004272 ORTHO05D005020 3.9e-20 104.0 292 28.1
Cfa026335 Carpinus fangiana HOM05D003314 ORTHO05D004164 3.9e-20 104.0 273 29.7
Carub.0002s1862 Capsella rubella HOM05D004272 ORTHO05D005020 5.1e-20 103.6 291 26.1
CBR_g49956 Chara braunii HOM05D004272 ORTHO05D005020 8.7e-20 102.8 270 29.6
BcaC08g46618 Brassica carinata HOM05D004272 ORTHO05D005020 1.5e-19 102.1 291 27.8
CARHR289070 Cardamine hirsuta HOM05D004272 ORTHO05D005020 1.5e-19 102.1 291 27.5
Lsat_1_v5_gn_5_157280 Lactuca sativa HOM05D004272 ORTHO05D005020 1.9e-19 101.7 293 27.0
Haze_26549 Corylus avellana HOM05D004272 ORTHO05D005020 3.3e-19 100.9 287 30.0
Pp3c13_6130 Physcomitrium patens HOM05D004272 ORTHO05D005020 3.3e-19 100.9 417 26.9
Migut.C01228 Erythranthe guttata HOM05D004272 ORTHO05D005020 4.3e-19 100.5 292 26.0
SMO347G0125 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 4.3e-19 100.5 288 29.2
AL2G31440 Arabidopsis lyrata HOM05D004272 ORTHO05D005020 7.4e-19 99.8 292 27.1
DCAR_014268 Daucus carota HOM05D004272 ORTHO05D005020 9.7e-19 99.4 359 26.5
BraA07t31367Z Brassica rapa HOM05D004272 ORTHO05D005020 1.3e-18 99.0 293 28.3
Thhalv10018624m.g Eutrema salsugineum HOM05D004272 ORTHO05D005020 1.3e-18 99.0 293 27.6
Aa31LG4G8760 Aethionema arabicum HOM05D004272 ORTHO05D005020 1.6e-18 98.6 292 26.4
A07p38020 Brassica napus HOM05D004272 ORTHO05D005020 1.6e-18 98.6 293 28.3
Manes.18G099100 Manihot esculenta HOM05D004272 ORTHO05D005020 2.2e-18 98.2 291 27.5
HanXRQChr13g0388201 Helianthus annuus HOM05D004272 ORTHO05D005020 2.8e-18 97.8 291 25.1
RcHm_v2.0_Chr3g0456471 Rosa chinensis HOM05D004272 ORTHO05D005020 2.8e-18 97.8 291 28.9
Cpa.g.sc64.134 Carica papaya HOM05D004272 ORTHO05D005020 4.8e-18 97.1 323 25.7
Prupe.8G052200 Prunus persica HOM05D004272 ORTHO05D005020 4.8e-18 97.1 295 26.4
FAN18G3209 Fragaria x ananassa HOM05D004272 ORTHO05D005020 6.3e-18 96.7 291 27.5
Nitab4.5_0006059g0040 Nicotiana tabacum HOM05D004272 ORTHO05D005020 6.3e-18 96.7 292 27.1
FAN13G2363 Fragaria x ananassa HOM05D004272 ORTHO05D005020 8.2e-18 96.3 294 28.2
FvH4_5g14850 Fragaria vesca HOM05D004272 ORTHO05D005020 1.1e-17 95.9 291 27.5
Sopen11g008950 Solanum pennellii HOM05D004272 ORTHO05D005020 1.4e-17 95.5 306 26.8
Aqoxy6G00139 Aquilegia oxysepala HOM05D004272 ORTHO05D005020 1.8e-17 95.1 288 26.7
FAN20G0830 Fragaria x ananassa HOM05D004272 ORTHO05D005020 1.8e-17 95.1 353 26.3
HPP92_003132 Vanilla planifolia HOM05D004272 ORTHO05D005020 1.8e-17 95.1 292 27.4
AT1G71860 Arabidopsis thaliana HOM05D004272 ORTHO05D005020 2.4e-17 94.7 290 26.2
FAN08G2250 Fragaria x ananassa HOM05D004272 ORTHO05D005020 3.1e-17 94.4 291 27.5
Gohir.D09G113700 Gossypium hirsutum HOM05D004272 ORTHO05D005020 3.1e-17 94.4 293 26.3
Solyc06g065480.4 Solanum lycopersicum HOM05D004272 ORTHO05D005020 3.1e-17 94.4 301 26.9
VMungo0720G1438 Vigna mungo HOM05D004272 ORTHO05D005020 3.1e-17 94.4 327 25.7
FvH4_2g12360 Fragaria vesca HOM05D004272 ORTHO05D005020 4.1e-17 94.0 352 26.7
FAN24G2414 Fragaria x ananassa HOM05D004272 ORTHO05D005020 4.1e-17 94.0 352 26.7
Phvul.007G087900 Phaseolus vulgaris HOM05D004272 ORTHO05D005020 4.1e-17 94.0 325 25.8
Potri.013G115400 Populus trichocarpa HOM05D004272 ORTHO05D005020 4.1e-17 94.0 312 29.2
RcHm_v2.0_Chr6g0272381 Rosa chinensis HOM05D004272 ORTHO05D005020 4.1e-17 94.0 374 25.4
Sp5g26920 Schrenkiella parvula HOM05D004272 ORTHO05D005020 4.1e-17 94.0 292 26.0
SpUn0020_0060 Schrenkiella parvula HOM05D004272 ORTHO05D005020 4.1e-17 94.0 292 26.0
Sed0022323 Sechium edule HOM05D004272 ORTHO05D005020 4.1e-17 94.0 290 25.5
Solyc11g016990.3 Solanum lycopersicum HOM05D004272 ORTHO05D005020 4.1e-17 94.0 306 26.8
Ca_10628_v3 Cicer arietinum L. HOM05D004272 ORTHO05D005020 6.9e-17 93.2 328 26.5
Medtr1g096990 Medicago truncatula HOM05D004272 ORTHO05D005020 6.9e-17 93.2 290 27.9
Sopen06g023970 Solanum pennellii HOM05D004272 ORTHO05D005020 6.9e-17 93.2 300 27.7
CANSAT25G2208 Cannabis sativa HOM05D004272 ORTHO05D005020 9.0e-17 92.8 328 25.6
Gorai.006G131400 Gossypium raimondii HOM05D004272 ORTHO05D005020 1.2e-16 92.4 293 26.3
Lj5g0022070 Lotus japonicus HOM05D004272 ORTHO05D005020 1.2e-16 92.4 292 26.7
TPR.G15693 Trifolium pratense HOM05D004272 ORTHO05D005020 1.2e-16 92.4 291 28.5
CiPaw.15G083400 Carya illinoinensis HOM05D004272 ORTHO05D005020 1.5e-16 92.0 331 25.1
Lalb_Chr06g0161911 Lupinus albus HOM05D004272 ORTHO05D005020 1.5e-16 92.0 292 27.1
THA.LOC104800104 Tarenaya hassleriana HOM05D004272 ORTHO05D005020 1.5e-16 92.0 302 25.5
unitig_61.g26072 Utricularia gibba HOM05D004272 ORTHO05D005020 1.5e-16 92.0 290 27.6
Cre09.g389949 Chlamydomonas reinhardtii HOM05D004272 ORTHO05D005020 2.0e-16 91.7 391 25.8
Glyma.10G218100 Glycine max HOM05D004272 ORTHO05D005020 2.0e-16 91.7 291 26.5
MD09G1287400 Malus domestica HOM05D004272 ORTHO05D005020 2.0e-16 91.7 296 28.7
RcHm_v2.0_Chr7g0181531 Rosa chinensis HOM05D004272 ORTHO05D005020 2.0e-16 91.7 292 27.7
Oeu004773.1 Olea europaea HOM05D004272 ORTHO05D005020 3.4e-16 90.9 291 25.4
QL02p034274 Quercus lobata HOM05D004272 ORTHO05D005020 3.4e-16 90.9 324 25.6
arahy.Tifrunner.gnm1.ann1.6Q1IL7 Arachis hypogaea HOM05D004272 ORTHO05D005020 4.5e-16 90.5 291 27.5
arahy.Tifrunner.gnm1.ann1.CBRY2G Arachis hypogaea HOM05D004272 ORTHO05D005020 4.5e-16 90.5 291 27.5
CAN.G61.12 Capsicum annuum HOM05D004272 ORTHO05D005020 4.5e-16 90.5 301 26.6
MELO3C018159.2 Cucumis melo HOM05D004272 ORTHO05D005020 4.5e-16 90.5 290 24.5
FAN27G2909 Fragaria x ananassa HOM05D004272 ORTHO05D005020 4.5e-16 90.5 320 27.2
Glyma.20G173700 Glycine max HOM05D004272 ORTHO05D005020 4.5e-16 90.5 331 26.0
Gohir.A09G116800 Gossypium hirsutum HOM05D004272 ORTHO05D005020 4.5e-16 90.5 293 26.3
Os12g0174800 Oryza sativa ssp. japonica HOM05D004272 ORTHO05D005020 4.5e-16 90.5 291 26.8
Sabra13G0097600 Salix brachista HOM05D004272 ORTHO05D005020 4.5e-16 90.5 292 27.7
CAN.G199.25 Capsicum annuum HOM05D004272 ORTHO05D005020 5.9e-16 90.1 304 26.3
GSVIVG01034890001 Vitis vinifera HOM05D004272 ORTHO05D005020 5.9e-16 90.1 293 25.3
Peaxi162Scf00268g01426 Petunia axillaris HOM05D004272 ORTHO05D005020 7.6e-16 89.7 292 26.7
SalBow6G0059 Salvia bowleyana HOM05D004272 ORTHO05D005020 7.6e-16 89.7 303 26.4
SalBow6G4901 Salvia bowleyana HOM05D004272 ORTHO05D005020 7.6e-16 89.7 302 27.2
CBR_g17924 Chara braunii HOM05D004272 ORTHO05D005020 1.0e-15 89.4 242 28.5
Eucgr.F04145 Eucalyptus grandis HOM05D004272 ORTHO05D005020 1.0e-15 89.4 301 25.2
PSO170G2262 Papaver somniferum HOM05D004272 ORTHO05D005020 1.0e-15 89.4 291 26.8
ATR0687G002 Amborella trichopoda HOM05D004272 ORTHO05D005020 1.3e-15 89.0 306 25.8
PSO170G2167 Papaver somniferum HOM05D004272 ORTHO05D005020 1.3e-15 89.0 292 27.4
Ciclev10001727m.g Citrus clementina HOM05D004272 ORTHO05D005020 1.7e-15 88.6 304 25.3
DCAR_010068 Daucus carota HOM05D004272 ORTHO05D005020 1.7e-15 88.6 322 25.8
ECA248G3752 Erigeron canadensis HOM05D004272 ORTHO05D005020 1.7e-15 88.6 293 26.3
Hund27072 Selenicereus undatus HOM05D004272 ORTHO05D005020 1.7e-15 88.6 291 25.8
CsaV3_7G024250 Cucumis sativus L. HOM05D004272 ORTHO05D005020 2.2e-15 88.2 291 25.1
Migut.N03339 Erythranthe guttata HOM05D004272 ORTHO05D005020 2.2e-15 88.2 291 25.8
Oeu030010.1 Olea europaea HOM05D004272 ORTHO05D005020 2.2e-15 88.2 292 25.0
Thecc.08G200200 Theobroma cacao HOM05D004272 ORTHO05D005020 2.9e-15 87.8 293 26.3
Dinv12903 Davidia involucrata HOM05D004272 ORTHO05D005020 3.8e-15 87.4 312 25.3
PSO782G4024 Papaver somniferum HOM05D004272 ORTHO05D005020 3.8e-15 87.4 293 28.3
Prupe.1G402600 Prunus persica HOM05D004272 ORTHO05D005020 3.8e-15 87.4 290 27.2
Sc01g0001660 Simmondsia chinensis HOM05D004272 ORTHO05D005020 5.0e-15 87.0 293 26.3
CiPaw.16G063800 Carya illinoinensis HOM05D004272 ORTHO05D005020 6.5e-15 86.7 339 25.1
Duzib116G0407 Durio zibethinus HOM05D004272 ORTHO05D005020 1.1e-14 85.9 309 25.2
PRCOL_00003935 Prasinoderma coloniale HOM05D004272 ORTHO05D005020 1.1e-14 85.9 323 27.2
AagrBONN_evm.TU.Sc2ySwM_228.1486 Anthoceros agrestis HOM05D004272 ORTHO05D005020 1.9e-14 85.1 332 24.1
MD10G1045300 Malus domestica HOM05D004272 ORTHO05D005020 1.9e-14 85.1 291 24.7
Rhsim06G0099300 Rhododendron simsii HOM05D004272 ORTHO05D005020 1.9e-14 85.1 330 25.2
Os11g0180200 Oryza sativa ssp. japonica HOM05D004272 ORTHO05D005020 2.5e-14 84.7 282 27.3
Actinidia02597 Actinidia chinensis HOM05D004272 ORTHO05D005020 3.2e-14 84.3 292 25.3
AUR62004668 Chenopodium quinoa HOM05D004272 ORTHO05D005020 3.2e-14 84.3 292 27.1
Cc00_g04120 Coffea canephora HOM05D004272 ORTHO05D005020 3.2e-14 84.3 291 25.1
Lj7C302G8 Lonicera japonica HOM05D004272 ORTHO05D005020 3.2e-14 84.3 294 26.5
CSS0015299 Camellia sinensis var. sinensis HOM05D004272 ORTHO05D005020 4.2e-14 84.0 291 24.7
Hma1.2p1_0510F.1_g168790 Hydrangea macrophylla HOM05D004272 ORTHO05D005020 4.2e-14 84.0 278 26.6
Nitab4.5_0000159g0070 Nicotiana tabacum HOM05D004272 ORTHO05D005020 4.2e-14 84.0 324 25.6
AUR62023587 Chenopodium quinoa HOM05D004272 ORTHO05D005020 1.6e-13 82.0 293 27.0
MD05G1039700 Malus domestica HOM05D004272 ORTHO05D005020 1.6e-13 82.0 278 24.1
EL10Ac1g00062 Beta vulgaris HOM05D004272 ORTHO05D005020 2.7e-13 81.3 276 28.3
Atru.chr13.1851 Acer truncatum HOM05D004272 ORTHO05D005020 7.9e-13 79.7 279 24.7
Haze_17897 Corylus avellana HOM05D004272 ORTHO05D005020 7.9e-13 79.7 291 24.7
TAR381G1009 Trochodendron aralioides HOM05D004272 ORTHO05D005020 1.0e-12 79.3 307 24.4
vmacro12508 Vaccinium macrocarpon HOM05D004272 ORTHO05D005020 3.0e-12 77.8 278 24.8
Hund16809 Selenicereus undatus HOM05D004272 ORTHO05D005020 8.8e-12 76.3 287 26.8
Rhsim11G0061700 Rhododendron simsii HOM05D004272 ORTHO05D005020 1.5e-11 75.5 316 24.7
Rhsim11G0063200 Rhododendron simsii HOM05D004272 ORTHO05D005020 1.5e-11 75.5 316 24.7
TWI60G0092 Tripterygium wilfordii HOM05D004272 ORTHO05D005020 1.5e-11 75.5 254 25.6
Manes.02G190000 Manihot esculenta HOM05D004272 ORTHO05D005020 7.4e-11 73.2 244 24.6
SHI09047 Sapria himalayana HOM05D004272 ORTHO05D005020 7.4e-11 73.2 261 25.7
vmacro00781 Vaccinium macrocarpon HOM05D004272 ORTHO05D005020 1.3e-10 72.4 337 24.0
HanXRQChr13g0388211 Helianthus annuus HOM05D004272 ORTHO05D005020 8.2e-10 69.7 303 24.4
SEGI_33079 Sequoiadendron giganteum HOM05D004272 ORTHO05D005020 2.4e-09 68.2 125 30.4
arahy.Tifrunner.gnm1.ann1.E3548W Arachis hypogaea HOM05D004272 ORTHO05D005020 4.1e-09 67.4 247 26.7
SGA_v2.0_scaffold149G36610 Striga asiatica HOM05D004272 ORTHO05D005020 7.7e-08 63.2 276 23.6
CBR_g53619 Chara braunii HOM05D004272 ORTHO05D005020 1.9e-06 58.5 117 35.0
CBR_g53623 Chara braunii HOM05D004272 ORTHO05D005020 2.5e-06 58.2 123 32.5
Hund16808 Selenicereus undatus HOM05D004272 ORTHO05D005020 4.2e-06 57.4 125 30.4
SMO351G0156 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 5.5e-06 57.0 109 30.3
ClCG09G010370 Citrullus lanatus HOM05D004272 ORTHO05D005020 7.2e-06 56.6 112 28.6
SMO119G0089 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 9.4e-06 56.2 119 31.9


User provided reference genes

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