Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 7.2e-256 886.7 441 100.0
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 1.5e-99 367.5 371 50.7
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 5.6e-99 365.5 366 50.8
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 7.3e-99 365.2 404 48.3
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.2e-98 364.4 371 50.7
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 1.6e-98 364.0 371 50.9
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 1.6e-98 364.0 376 50.0
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.6e-98 364.0 397 47.9
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.6e-98 364.0 369 50.4
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 2.1e-98 363.6 369 50.9
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 2.8e-98 363.2 389 48.8
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 2.8e-98 363.2 369 51.2
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 3.6e-98 362.8 378 49.7
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 4.7e-98 362.5 397 47.9
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 4.7e-98 362.5 369 51.2
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 6.2e-98 362.1 371 50.1
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 6.2e-98 362.1 369 50.4
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 6.2e-98 362.1 369 50.7
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 8.1e-98 361.7 377 49.3
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 8.1e-98 361.7 369 50.4
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 8.1e-98 361.7 397 47.9
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 1.1e-97 361.3 371 50.1
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 1.4e-97 360.9 371 50.9
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 1.4e-97 360.9 369 49.9
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 1.4e-97 360.9 371 50.7
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 1.4e-97 360.9 369 50.7
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 1.8e-97 360.5 394 48.2
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 1.8e-97 360.5 369 50.4
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 1.8e-97 360.5 371 50.1
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.8e-97 360.5 406 48.0
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 2.3e-97 360.1 371 50.4
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 3.1e-97 359.8 394 48.2
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 3.1e-97 359.8 369 50.4
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 3.1e-97 359.8 366 51.4
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 4.0e-97 359.4 369 49.9
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 4.0e-97 359.4 372 50.0
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 5.2e-97 359.0 410 47.3
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 5.2e-97 359.0 377 51.2
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 5.2e-97 359.0 371 49.9
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 5.2e-97 359.0 390 48.5
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 5.2e-97 359.0 371 49.6
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 5.2e-97 359.0 369 50.4
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 6.8e-97 358.6 394 48.0
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 6.8e-97 358.6 369 49.3
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 8.9e-97 358.2 371 50.1
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 8.9e-97 358.2 402 47.8
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 8.9e-97 358.2 371 50.7
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 8.9e-97 358.2 372 50.0
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 1.2e-96 357.8 406 47.8
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 1.2e-96 357.8 369 50.1
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.2e-96 357.8 429 44.3
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 1.5e-96 357.5 369 49.3
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 1.5e-96 357.5 371 49.9
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.5e-96 357.5 369 50.1
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 1.5e-96 357.5 398 47.0
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 2.0e-96 357.1 371 49.6
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 2.0e-96 357.1 369 50.1
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 2.0e-96 357.1 372 50.0
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 2.6e-96 356.7 369 50.9
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 2.6e-96 356.7 369 49.6
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 2.6e-96 356.7 377 49.3
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 2.6e-96 356.7 369 50.1
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 3.4e-96 356.3 370 50.3
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 3.4e-96 356.3 375 48.8
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 4.4e-96 355.9 372 50.0
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 5.8e-96 355.5 371 49.9
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 5.8e-96 355.5 371 49.6
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 9.9e-96 354.8 369 50.1
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 9.9e-96 354.8 369 50.7
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 9.9e-96 354.8 371 50.1
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 9.9e-96 354.8 366 50.5
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 1.7e-95 354.0 369 50.4
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.7e-95 354.0 386 48.2
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 2.2e-95 353.6 371 49.3
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 2.2e-95 353.6 372 49.7
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 2.9e-95 353.2 369 48.8
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 3.7e-95 352.8 372 49.5
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 4.9e-95 352.4 369 48.8
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 4.9e-95 352.4 395 46.3
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 6.4e-95 352.1 372 49.5
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 6.4e-95 352.1 371 49.1
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 6.4e-95 352.1 372 49.2
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 6.4e-95 352.1 372 49.7
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 8.3e-95 351.7 405 46.7
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 8.3e-95 351.7 371 49.3
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 1.1e-94 351.3 373 48.8
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 1.4e-94 350.9 403 46.2
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 3.2e-94 349.7 369 49.9
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 9.2e-94 348.2 404 47.0
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 9.2e-94 348.2 369 49.1
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 1.2e-93 347.8 369 48.5
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.2e-93 347.8 369 49.1
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 2.1e-93 347.1 376 48.1
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 2.1e-93 347.1 377 48.5
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 1.0e-92 344.7 369 47.7
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.7e-92 344.0 384 47.4
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 5.1e-92 342.4 369 48.8
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 7.3e-91 338.6 373 47.5
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 1.6e-90 337.4 375 48.5
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 1.6e-90 337.4 358 48.6
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.4e-89 334.3 397 46.3
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 1.8e-89 334.0 326 51.5
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 1.8e-89 334.0 363 48.8
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 2.4e-89 333.6 293 54.9
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 3.0e-84 316.6 413 43.1
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 6.6e-84 315.5 369 46.6
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 2.4e-81 307.0 374 45.5
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 4.0e-81 306.2 387 42.6
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 2.1e-74 283.9 368 42.1
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.1e-73 280.0 372 43.3
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 5.4e-70 269.2 396 41.2
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 8.7e-68 261.9 366 41.5
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 5.8e-64 249.2 371 41.2
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.7e-63 247.7 267 44.2
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 5.5e-62 242.7 219 54.8
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 2.3e-60 237.3 246 49.2
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 3.0e-60 236.9 223 52.9
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.5e-59 234.6 219 53.0
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 1.6e-58 231.1 221 51.6
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 6.9e-41 172.6 156 53.2
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 9.4e-38 162.2 171 50.9
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.5e-35 154.8 216 39.4
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 7.2e-30 136.0 152 45.4
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.0e-20 105.5 137 43.1


User provided reference genes

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