Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022671 Carpinus fangiana HOM05D001547 ORTHO05D001426 2.2e-289 998.4 568 100.0
SEGI_23245 Sequoiadendron giganteum HOM05D001547 ORTHO05D001426 3.2e-14 84.3 121 38.8
SEGI_24337 Sequoiadendron giganteum HOM05D001547 ORTHO05D001426 3.2e-14 84.3 121 38.8
PRCOL_00003814 Prasinoderma coloniale HOM05D001547 ORTHO05D001426 1.8e-12 78.6 113 35.4
AagrBONN_evm.TU.Sc2ySwM_344.3253 Anthoceros agrestis HOM05D001547 ORTHO05D001426 3.0e-12 77.8 116 33.6
TWI23G1112 Tripterygium wilfordii HOM05D001547 ORTHO05D001426 3.0e-12 77.8 116 36.2
Zm00001eb054140 Zea mays HOM05D001547 ORTHO05D001426 6.7e-12 76.6 114 37.7
Mapoly0121s0029 Marchantia polymorpha HOM05D001547 ORTHO05D001426 8.7e-12 76.3 97 36.1
SMO116G0042 Selaginella moellendorffii HOM05D001547 ORTHO05D001426 8.7e-12 76.3 113 38.9
Lalb_Chr18g0060891 Lupinus albus HOM05D001547 ORTHO05D001426 1.5e-11 75.5 104 39.4
TPR.G2154 Trifolium pratense HOM05D001547 ORTHO05D001426 1.5e-11 75.5 117 41.9
RcHm_v2.0_Chr7g0222681 Rosa chinensis HOM05D001547 ORTHO05D001426 1.9e-11 75.1 116 35.3
Carub.0003s0591 Capsella rubella HOM05D001547 ORTHO05D001426 2.5e-11 74.7 130 39.2
Psat1g224480 Pisum sativum HOM05D001547 ORTHO05D001426 2.5e-11 74.7 117 41.0
Medtr7g113780 Medicago truncatula HOM05D001547 ORTHO05D001426 3.3e-11 74.3 120 40.0
Nitab4.5_0003569g0010 Nicotiana tabacum HOM05D001547 ORTHO05D001426 4.3e-11 73.9 102 38.2
Solyc10g046810.1 Solanum lycopersicum HOM05D001547 ORTHO05D001426 4.3e-11 73.9 105 39.0
PGSC0003DMG400002420 Solanum tuberosum HOM05D001547 ORTHO05D001426 4.3e-11 73.9 114 36.0
Haze_01658 Corylus avellana HOM05D001547 ORTHO05D001426 5.7e-11 73.6 108 38.9
MD15G1421900 Malus domestica HOM05D001547 ORTHO05D001426 5.7e-11 73.6 115 40.0
SMO200G0059 Selaginella moellendorffii HOM05D001547 ORTHO05D001426 5.7e-11 73.6 107 35.5
Solyc10g046830.2 Solanum lycopersicum HOM05D001547 ORTHO05D001426 5.7e-11 73.6 102 38.2
CANSAT11G1701 Cannabis sativa HOM05D001547 ORTHO05D001426 7.4e-11 73.2 121 38.8
Cfa021305 Carpinus fangiana HOM05D001547 ORTHO05D001426 7.4e-11 73.2 115 36.5
Prupe.1G567100 Prunus persica HOM05D001547 ORTHO05D001426 7.4e-11 73.2 114 36.8
Thhalv10021249m.g Eutrema salsugineum HOM05D001547 ORTHO05D001426 9.6e-11 72.8 119 42.0
unitig_26.g9019 Utricularia gibba HOM05D001547 ORTHO05D001426 9.6e-11 72.8 117 38.5
BcaB04g21341 Brassica carinata HOM05D001547 ORTHO05D001426 1.3e-10 72.4 108 43.5
Os03g0701500 Oryza sativa ssp. japonica HOM05D001547 ORTHO05D001426 1.3e-10 72.4 99 41.4
TWI14G0011 Tripterygium wilfordii HOM05D001547 ORTHO05D001426 1.3e-10 72.4 115 39.1
Atru.chr6.847 Acer truncatum HOM05D001547 ORTHO05D001426 1.6e-10 72.0 112 38.4
Ca_00083_v3 Cicer arietinum L. HOM05D001547 ORTHO05D001426 1.6e-10 72.0 116 36.2
Nitab4.5_0000056g0170 Nicotiana tabacum HOM05D001547 ORTHO05D001426 1.6e-10 72.0 102 38.2
Solyc07g018240.1 Solanum lycopersicum HOM05D001547 ORTHO05D001426 1.6e-10 72.0 114 35.1
Sopen07g007390 Solanum pennellii HOM05D001547 ORTHO05D001426 1.6e-10 72.0 114 35.1
Glyma.08G185600 Glycine max HOM05D001547 ORTHO05D001426 2.1e-10 71.6 108 38.9
Lj6g0015272 Lotus japonicus HOM05D001547 ORTHO05D001426 2.1e-10 71.6 119 35.3
Manes.10G130500 Manihot esculenta HOM05D001547 ORTHO05D001426 2.1e-10 71.6 115 35.7
vmacro01765 Vaccinium macrocarpon HOM05D000102 ORTHO05D003793 2.1e-10 71.6 115 38.3
MSTRG.16526 Avicennia marina HOM05D001547 ORTHO05D001426 2.8e-10 71.2 109 40.4
BcaC09g47900 Brassica carinata HOM05D001547 ORTHO05D001426 2.8e-10 71.2 111 42.3
BNapus_Darmor_BZH_scaffold_118p00100 Brassica napus HOM05D001547 ORTHO05D001426 2.8e-10 71.2 111 42.3
BolC1t05618H Brassica oleracea HOM05D001547 ORTHO05D001426 2.8e-10 71.2 111 42.3
BraA01t04436Z Brassica rapa HOM05D001547 ORTHO05D001426 2.8e-10 71.2 111 42.3
Thhalv10021309m.g Eutrema salsugineum HOM05D001547 ORTHO05D001426 2.8e-10 71.2 122 41.8
AUR62017321 Chenopodium quinoa HOM05D001547 ORTHO05D001426 3.7e-10 70.9 112 33.9
COL.COLO4_17876 Corchorus olitorius HOM05D001547 ORTHO05D001426 3.7e-10 70.9 103 46.6
FvH4_5g29630 Fragaria vesca HOM05D001547 ORTHO05D001426 3.7e-10 70.9 116 34.5
FAN18G1132 Fragaria x ananassa HOM05D001547 ORTHO05D001426 3.7e-10 70.9 116 34.5
Solyc01g104180.2 Solanum lycopersicum HOM05D001547 ORTHO05D001426 3.7e-10 70.9 111 38.7
AT3G06470 Arabidopsis thaliana HOM05D001547 ORTHO05D001426 4.8e-10 70.5 111 43.2
Manes.07G015000 Manihot esculenta HOM05D001547 ORTHO05D001426 4.8e-10 70.5 115 36.5
Pp3c16_6370 Physcomitrium patens HOM05D001547 ORTHO05D001426 4.8e-10 70.5 114 33.3
Sed0009207 Sechium edule HOM05D001547 ORTHO05D001426 4.8e-10 70.5 100 38.0
SGA_v2.0_scaffold189G40371 Striga asiatica HOM05D001547 ORTHO05D001426 4.8e-10 70.5 116 35.3
Atru.chr6.852 Acer truncatum HOM05D001547 ORTHO05D001426 6.2e-10 70.1 117 37.6
Atru.chr6.856 Acer truncatum HOM05D001547 ORTHO05D001426 6.2e-10 70.1 117 37.6
ClCG09G014390 Citrullus lanatus HOM05D001547 ORTHO05D001426 6.2e-10 70.1 100 37.0
FAN13G2562 Fragaria x ananassa HOM05D001547 ORTHO05D001426 6.2e-10 70.1 116 34.5
THA.LOC104802715 Tarenaya hassleriana HOM05D001547 ORTHO05D001426 6.2e-10 70.1 108 39.8
AL3G17480 Arabidopsis lyrata HOM05D001547 ORTHO05D001426 8.2e-10 69.7 104 41.3
Cpa.g.sc113.68 Carica papaya HOM05D001547 ORTHO05D001426 8.2e-10 69.7 117 38.5
Eucgr.I02717 Eucalyptus grandis HOM05D001547 ORTHO05D001426 8.2e-10 69.7 100 43.0
FAN08G2307 Fragaria x ananassa HOM05D001547 ORTHO05D001426 8.2e-10 69.7 116 34.5
QL11p000281 Quercus lobata HOM05D001547 ORTHO05D001426 8.2e-10 69.7 117 36.8
Sed0010217 Sechium edule HOM05D001547 ORTHO05D001426 8.2e-10 69.7 100 38.0
Sed0026506 Sechium edule HOM05D001547 ORTHO05D001426 8.2e-10 69.7 109 40.4
TWI14G1183 Tripterygium wilfordii HOM05D001547 ORTHO05D001426 8.2e-10 69.7 117 33.3
CAN.G1577.21 Capsicum annuum HOM05D001547 ORTHO05D001426 1.1e-09 69.3 102 37.3
CARHR081000 Cardamine hirsuta HOM05D001547 ORTHO05D001426 1.1e-09 69.3 108 42.6
MELO3C014376.2 Cucumis melo HOM05D001547 ORTHO05D001426 1.1e-09 69.3 100 38.0
PSO170G2757 Papaver somniferum HOM05D001547 ORTHO05D001426 1.1e-09 69.3 113 37.2
Prupe.1G567000 Prunus persica HOM05D001547 ORTHO05D001426 1.1e-09 69.3 115 36.5
Sp3g05410 Schrenkiella parvula HOM05D001547 ORTHO05D001426 1.1e-09 69.3 118 40.7
Solyc07g018250.1 Solanum lycopersicum HOM05D001547 ORTHO05D001426 1.1e-09 69.3 114 33.3
AL3G17490 Arabidopsis lyrata HOM05D001547 ORTHO05D001426 1.4e-09 68.9 111 41.4
A03p34690 Brassica napus HOM05D001547 ORTHO05D001426 1.4e-09 68.9 111 40.5
BolC3t16497H Brassica oleracea HOM05D001547 ORTHO05D001426 1.4e-09 68.9 118 39.8
BraA03t12647Z Brassica rapa HOM05D001547 ORTHO05D001426 1.4e-09 68.9 118 39.8
BraA05t22876Z Brassica rapa HOM05D001547 ORTHO05D001426 1.4e-09 68.9 108 41.7
Carub.0003s0592 Capsella rubella HOM05D001547 ORTHO05D001426 1.4e-09 68.9 109 43.1
CARHR080980 Cardamine hirsuta HOM05D001547 ORTHO05D001426 1.4e-09 68.9 103 45.6
Cc02_g22410 Coffea canephora HOM05D001547 ORTHO05D001426 1.4e-09 68.9 109 39.4
PGSC0003DMG400023810 Solanum tuberosum HOM05D001547 ORTHO05D001426 1.4e-09 68.9 117 35.9
TWI59G0314 Tripterygium wilfordii HOM05D001547 ORTHO05D001426 1.4e-09 68.9 115 38.3
BcaC05g29820 Brassica carinata HOM05D001547 ORTHO05D001426 1.8e-09 68.6 111 41.4
BolC5t34735H Brassica oleracea HOM05D001547 ORTHO05D001426 1.8e-09 68.6 111 41.4
CiPaw.05G043600 Carya illinoinensis HOM05D001547 ORTHO05D001426 1.8e-09 68.6 109 36.7
CsaV3_6G037400 Cucumis sativus L. HOM05D001547 ORTHO05D001426 1.8e-09 68.6 100 37.0
Gorai.002G209600 Gossypium raimondii HOM05D001547 ORTHO05D001426 1.8e-09 68.6 101 40.6
Sopen01g046650 Solanum pennellii HOM05D001547 ORTHO05D001426 1.8e-09 68.6 115 38.3
AT3G06460 Arabidopsis thaliana HOM05D001547 ORTHO05D001426 2.4e-09 68.2 119 37.8
BcaC09g47898 Brassica carinata HOM05D001547 ORTHO05D001426 2.4e-09 68.2 108 41.7
C03p42160 Brassica napus HOM05D001547 ORTHO05D001426 2.4e-09 68.2 118 39.8
BolC1t05619H Brassica oleracea HOM05D001547 ORTHO05D001426 2.4e-09 68.2 108 41.7
ClCG09G014360 Citrullus lanatus HOM05D001547 ORTHO05D001426 2.4e-09 68.2 109 39.4
MELO3C014378.2 Cucumis melo HOM05D001547 ORTHO05D001426 2.4e-09 68.2 109 39.4
CsaV3_6G037390 Cucumis sativus L. HOM05D001547 ORTHO05D001426 2.4e-09 68.2 109 39.4
Eucgr.I02718 Eucalyptus grandis HOM05D001547 ORTHO05D001426 2.4e-09 68.2 113 34.5
FAN08G2472 Fragaria x ananassa HOM05D001547 ORTHO05D001426 2.4e-09 68.2 115 36.5
FAN13G0032 Fragaria x ananassa HOM05D001547 ORTHO05D001426 2.4e-09 68.2 115 36.5
FAN18G2067 Fragaria x ananassa HOM05D001547 ORTHO05D001426 2.4e-09 68.2 115 36.5
MD08G1227900 Malus domestica HOM05D001547 ORTHO05D001426 2.4e-09 68.2 101 38.6
RcHm_v2.0_Chr7g0222701 Rosa chinensis HOM05D001547 ORTHO05D001426 2.4e-09 68.2 101 38.6
MELO3C034909.2 Cucumis melo HOM05D001547 ORTHO05D001426 3.1e-09 67.8 108 37.0
Duzib052G0983 Durio zibethinus HOM05D001547 ORTHO05D001426 3.1e-09 67.8 113 41.6
Gohir.D01G000500 Gossypium hirsutum HOM05D001547 ORTHO05D001426 3.1e-09 67.8 104 36.5
Peaxi162Scf00003g03828 Petunia axillaris HOM05D001547 ORTHO05D001426 3.1e-09 67.8 116 32.8
SHI25657 Sapria himalayana HOM05D001547 ORTHO05D001426 3.1e-09 67.8 114 33.3
ATR0193G002 Amborella trichopoda HOM05D001547 ORTHO05D001426 4.1e-09 67.4 113 36.3
BcaB04g21340 Brassica carinata HOM05D001547 ORTHO05D001426 4.1e-09 67.4 108 41.7
BcaC05g30022 Brassica carinata HOM05D001547 ORTHO05D001426 4.1e-09 67.4 108 41.7
A05p41550 Brassica napus HOM05D001547 ORTHO05D001426 4.1e-09 67.4 108 41.7
C05p60750 Brassica napus HOM05D001547 ORTHO05D001426 4.1e-09 67.4 108 41.7
CSS0049626 Camellia sinensis var. sinensis HOM05D001547 ORTHO05D001426 4.1e-09 67.4 115 36.5
Gohir.A01G000800 Gossypium hirsutum HOM05D001547 ORTHO05D001426 4.1e-09 67.4 100 37.0
Gorai.002G001100 Gossypium raimondii HOM05D001547 ORTHO05D001426 4.1e-09 67.4 100 37.0
Oeu025685.1 Olea europaea HOM05D001547 ORTHO05D001426 4.1e-09 67.4 116 35.3
Sp3g05400 Schrenkiella parvula HOM05D001547 ORTHO05D001426 4.1e-09 67.4 108 41.7
CiPaw.06G148100 Carya illinoinensis HOM05D001547 ORTHO05D001426 5.3e-09 67.0 118 30.5
Gorai.008G041800 Gossypium raimondii HOM05D001547 ORTHO05D001426 5.3e-09 67.0 100 36.0
Lj6g0003855 Lotus japonicus HOM05D001547 ORTHO05D001426 5.3e-09 67.0 101 36.6
Manes.10G130400 Manihot esculenta HOM05D001547 ORTHO05D001426 5.3e-09 67.0 115 33.9
VMungo0540G2140 Vigna mungo HOM05D001547 ORTHO05D001426 5.3e-09 67.0 101 38.6
arahy.Tifrunner.gnm1.ann1.43BKPV Arachis hypogaea HOM05D001547 ORTHO05D001426 6.9e-09 66.6 98 37.8
BNapus_Darmor_BZH_scaffold_118p00090 Brassica napus HOM05D001547 ORTHO05D001426 6.9e-09 66.6 116 41.4
BraA01t04435Z Brassica rapa HOM05D001547 ORTHO05D001426 6.9e-09 66.6 116 41.4
Haze_01653 Corylus avellana HOM05D000102 ORTHO05D001426 6.9e-09 66.6 109 33.9
Gohir.A01G000900 Gossypium hirsutum HOM05D001547 ORTHO05D001426 6.9e-09 66.6 100 36.0
Gohir.D01G168800 Gossypium hirsutum HOM05D001547 ORTHO05D001426 6.9e-09 66.6 101 39.6
Nn5g28160 Nelumbo nucifera HOM05D001547 ORTHO05D001426 6.9e-09 66.6 100 40.0
Phvul.006G213700 Phaseolus vulgaris HOM05D001547 ORTHO05D001426 6.9e-09 66.6 101 38.6
PRCOL_00003099 Prasinoderma coloniale HOM05D000059 ORTHO05D034436 6.9e-09 66.6 94 35.1
BcaC09g47903 Brassica carinata HOM05D001547 ORTHO05D001426 9.0e-09 66.2 118 39.8
BolC1t05612H Brassica oleracea HOM05D001547 ORTHO05D001426 9.0e-09 66.2 118 39.8
COL.COLO4_17877 Corchorus olitorius HOM05D001547 ORTHO05D001426 9.0e-09 66.2 100 37.0
Gohir.D01G000600 Gossypium hirsutum HOM05D001547 ORTHO05D001426 9.0e-09 66.2 100 36.0
Gohir.D12G040100 Gossypium hirsutum HOM05D001547 ORTHO05D001426 9.0e-09 66.2 100 36.0
MD15G1421700 Malus domestica HOM05D001547 ORTHO05D001426 9.0e-09 66.2 115 35.7
Aqoxy6G00162 Aquilegia oxysepala HOM05D001547 ORTHO05D001426 1.2e-08 65.9 113 37.2
MBI03_g33019_MAGBIO Magnolia biondii HOM05D001547 ORTHO05D001426 1.2e-08 65.9 100 40.0
PGR142G4445 Punica granatum HOM05D001547 ORTHO05D001426 1.2e-08 65.9 116 31.0
HPP92_004119 Vanilla planifolia HOM05D001547 ORTHO05D001426 1.2e-08 65.9 101 36.6
Actinidia00209 Actinidia chinensis HOM05D004517 ORTHO05D005366 1.5e-08 65.5 115 40.0
Aa31LG5G17000 Aethionema arabicum HOM05D001547 ORTHO05D001426 1.5e-08 65.5 111 38.7
arahy.Tifrunner.gnm1.ann1.FQ4RXM Arachis hypogaea HOM05D001547 ORTHO05D001426 1.5e-08 65.5 121 34.7
Gohir.A01G178000 Gossypium hirsutum HOM05D001547 ORTHO05D001426 1.5e-08 65.5 99 39.4
Gohir.A12G032400 Gossypium hirsutum HOM05D001547 ORTHO05D001426 1.5e-08 65.5 100 34.0
Gohir.A12G032450 Gossypium hirsutum HOM05D001547 ORTHO05D001426 1.5e-08 65.5 100 34.0
Potri.003G019800 Populus trichocarpa HOM05D001547 ORTHO05D001426 1.5e-08 65.5 100 37.0
PRCOL_00006595 Prasinoderma coloniale HOM05D001547 ORTHO05D001426 1.5e-08 65.5 93 38.7
BcaC09g47901 Brassica carinata HOM05D001547 ORTHO05D001426 2.0e-08 65.1 103 40.8
BolC1t05615H Brassica oleracea HOM05D001547 ORTHO05D001426 2.0e-08 65.1 103 40.8
ClCG09G014320 Citrullus lanatus HOM05D001547 ORTHO05D001426 2.0e-08 65.1 105 38.1
Potri.003G019700 Populus trichocarpa HOM05D001547 ORTHO05D001426 2.0e-08 65.1 115 33.0
Thecc.02G039500 Theobroma cacao HOM05D001547 ORTHO05D001426 2.0e-08 65.1 100 36.0
BcaB04g21342 Brassica carinata HOM05D001547 ORTHO05D001426 2.6e-08 64.7 113 38.1
Cfa005529 Carpinus fangiana HOM05D001547 ORTHO05D001426 2.6e-08 64.7 109 32.1
Duzib248G0902 Durio zibethinus HOM05D001547 ORTHO05D001426 2.6e-08 64.7 100 37.0
SGA_v2.0_scaffold1G00313 Striga asiatica HOM05D001547 ORTHO05D001426 3.4e-08 64.3 107 35.5
BcaC09g47902 Brassica carinata HOM05D001547 ORTHO05D001426 4.5e-08 63.9 103 39.8
BolC1t05614H Brassica oleracea HOM05D001547 ORTHO05D001426 4.5e-08 63.9 103 39.8
Duzib132G0193 Durio zibethinus HOM05D001547 ORTHO05D001426 4.5e-08 63.9 100 36.0
Lsat_1_v5_gn_5_109420 Lactuca sativa HOM05D001547 ORTHO05D001426 4.5e-08 63.9 113 32.7
PGSC0003DMG400012742 Solanum tuberosum HOM05D001547 ORTHO05D001426 4.5e-08 63.9 102 36.3
Thecc.02G039400 Theobroma cacao HOM05D001547 ORTHO05D001426 4.5e-08 63.9 115 40.9
HanXRQChr10g0290401 Helianthus annuus HOM05D001547 ORTHO05D001426 5.8e-08 63.5 115 34.8
HPP92_004069 Vanilla planifolia HOM05D001547 ORTHO05D001426 5.8e-08 63.5 101 35.6
CBR_g924 Chara braunii HOM05D001547 ORTHO05D001426 7.6e-08 63.2 146 30.1
Duzib192G1022 Durio zibethinus HOM05D001547 ORTHO05D001426 1.0e-07 62.8 100 36.0
Phvul.006G213900 Phaseolus vulgaris HOM05D001547 ORTHO05D001426 1.0e-07 62.8 115 30.4
SalBow5G3599 Salvia bowleyana HOM05D001547 ORTHO05D001426 1.0e-07 62.8 113 40.7
Hma1.2p1_0557F.1_g178400 Hydrangea macrophylla HOM05D001547 ORTHO05D001426 2.9e-07 61.2 115 37.4
Lj9P306T56 Lonicera japonica HOM05D001547 ORTHO05D001426 5.0e-07 60.5 117 34.2
Nn1g08694 Nelumbo nucifera HOM05D001547 ORTHO05D001426 5.0e-07 60.5 100 41.0
DCAR_013990 Daucus carota HOM05D001547 ORTHO05D001426 6.5e-07 60.1 114 35.1
CAN.G1162.2 Capsicum annuum HOM05D001547 ORTHO05D001426 8.4e-07 59.7 110 32.7
MCO13G217 Micromonas commoda HOM05D001547 ORTHO05D001426 1.9e-06 58.5 121 32.2
Actinidia39045 Actinidia chinensis HOM05D001547 ORTHO05D001426 3.2e-06 57.8 83 41.0
MCO10G406 Micromonas commoda HOM05D001547 ORTHO05D001426 5.5e-06 57.0 101 34.7
CBR_g48498 Chara braunii HOM05D001547 ORTHO05D001426 7.1e-06 56.6 128 35.2
AagrBONN_evm.TU.Sc2ySwM_362.1268 Anthoceros agrestis HOM05D001547 ORTHO05D001426 9.3e-06 56.2 82 40.2
Nitab4.5_0001706g0030 Nicotiana tabacum HOM05D001547 ORTHO05D001426 9.3e-06 56.2 86 36.0


User provided reference genes

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