Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022668 Carpinus fangiana HOM05D013358 ORTHO05D124219 7.6e-312 1073.2 559 100.0
Cfa025250 Carpinus fangiana HOM05D013358 ORTHO05D123203 3.1e-110 403.3 422 48.3
Cfa027177 Carpinus fangiana HOM05D013358 ORTHO05D122370 4.8e-87 326.2 348 51.4
Cfa023188 Carpinus fangiana HOM05D013358 ORTHO05D122905 7.9e-74 282.3 362 42.0
Cfa022216 Carpinus fangiana HOM05D013358 ORTHO05D124742 2.4e-70 270.8 367 41.7
Cfa021408 Carpinus fangiana HOM05D013358 ORTHO05D124666 1.3e-68 265.0 396 37.1
Cfa027314 Carpinus fangiana HOM05D013358 ORTHO05D125844 1.4e-59 235.0 312 39.7
Cfa027203 Carpinus fangiana HOM05D013358 ORTHO05D122817 1.4e-54 218.4 373 36.5
Cfa021760 Carpinus fangiana HOM05D013358 ORTHO05D125867 9.4e-35 152.5 377 28.9
Cfa021614 Carpinus fangiana HOM05D013358 ORTHO05D123423 2.8e-23 114.4 302 30.1
Cfa025912 Carpinus fangiana HOM05D013358 ORTHO05D126284 3.8e-20 104.0 353 28.3
MCO16G237 Micromonas commoda HOM05D001069 ORTHO05D007586 5.2e-09 67.0 118 37.3
CDE06G2591 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 6.8e-09 66.6 122 34.4
PRCOL_00003582 Prasinoderma coloniale HOM05D001069 ORTHO05D007586 6.8e-09 66.6 116 37.1
TWI12G0612 Tripterygium wilfordii HOM05D001069 ORTHO05D007586 1.5e-08 65.5 122 35.2
AL1G19210 Arabidopsis lyrata HOM05D001069 ORTHO05D007586 5.8e-08 63.5 128 32.8
EL10Ac4g09163 Beta vulgaris HOM05D001069 ORTHO05D007586 5.8e-08 63.5 121 33.1
Sed0025346 Sechium edule HOM05D001069 ORTHO05D007586 5.8e-08 63.5 119 36.1
THA.LOC104805822 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 5.8e-08 63.5 119 36.1
Aa31sc20G40 Aethionema arabicum HOM05D001069 ORTHO05D007586 9.8e-08 62.8 121 34.7
AT1G08780 Arabidopsis thaliana HOM05D001069 ORTHO05D007586 9.8e-08 62.8 128 32.8
CARHR008700 Cardamine hirsuta HOM05D001069 ORTHO05D007586 1.3e-07 62.4 119 35.3
THA.LOC104823751 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 1.3e-07 62.4 119 35.3
BcaB07g34137 Brassica carinata HOM05D001069 ORTHO05D007586 1.7e-07 62.0 128 32.8
PGR004G2600 Punica granatum HOM05D001069 ORTHO05D007586 1.7e-07 62.0 119 34.5
Hund22103 Selenicereus undatus HOM05D001069 ORTHO05D007586 1.7e-07 62.0 121 33.1
Carub.0001s0812 Capsella rubella HOM05D001069 ORTHO05D007586 2.2e-07 61.6 117 34.2
AUR62004967 Chenopodium quinoa HOM05D001069 ORTHO05D007586 2.2e-07 61.6 121 33.9
PSO210G4375 Papaver somniferum HOM05D001069 ORTHO05D007586 2.2e-07 61.6 119 33.6
C05p06850 Brassica napus HOM05D001069 ORTHO05D007586 2.9e-07 61.2 121 33.9
Cfa024509 Carpinus fangiana HOM05D013358 ORTHO05D123991 2.9e-07 61.2 185 28.1
AUR62000994 Chenopodium quinoa HOM05D001069 ORTHO05D007586 2.9e-07 61.2 121 33.9
Cre16.g671750 Chlamydomonas reinhardtii HOM05D001069 ORTHO05D007586 2.9e-07 61.2 124 33.9
A06p05680 Brassica napus HOM05D001069 ORTHO05D007586 3.7e-07 60.8 128 32.0
BraA08t35409Z Brassica rapa HOM05D001069 ORTHO05D007586 3.7e-07 60.8 131 29.8
QL03p027238 Quercus lobata HOM05D001069 ORTHO05D007586 3.7e-07 60.8 119 33.6
A08p34980 Brassica napus HOM05D001069 ORTHO05D007586 4.9e-07 60.5 131 29.8
ClCG02G016730 Citrullus lanatus HOM05D001069 ORTHO05D007586 4.9e-07 60.5 119 35.3
Lj5g0026442 Lotus japonicus HOM05D001069 ORTHO05D007586 4.9e-07 60.5 119 32.8
Lalb_Chr06g0168091 Lupinus albus HOM05D001069 ORTHO05D007586 6.4e-07 60.1 119 32.8
Manes.08G135700 Manihot esculenta HOM05D001069 ORTHO05D007586 6.4e-07 60.1 119 32.8
Oeu002656.1 Olea europaea HOM05D001069 ORTHO05D007586 6.4e-07 60.1 121 33.1
Sp1g07420 Schrenkiella parvula HOM05D001069 ORTHO05D007586 6.4e-07 60.1 123 33.3
GSVIVG01036275001 Vitis vinifera HOM05D001069 ORTHO05D007586 6.4e-07 60.1 119 32.8
Migut.B01094 Erythranthe guttata HOM05D001069 ORTHO05D007586 8.3e-07 59.7 126 31.7
Medtr1g080770 Medicago truncatula HOM05D001069 ORTHO05D007586 8.3e-07 59.7 119 31.9
PSO832G3124 Papaver somniferum HOM05D001069 ORTHO05D007586 8.3e-07 59.7 119 32.8
VMungo0720G0790 Vigna mungo HOM05D001069 ORTHO05D007586 8.3e-07 59.7 119 32.8
Thhalv10009095m.g Eutrema salsugineum HOM05D001069 ORTHO05D007586 1.1e-06 59.3 123 33.3
Nn3g19512 Nelumbo nucifera HOM05D001069 ORTHO05D007586 1.1e-06 59.3 116 32.8
Pp3c16_6640 Physcomitrium patens HOM05D001069 ORTHO05D007586 1.1e-06 59.3 118 35.6
TPR.G12907 Trifolium pratense HOM05D001069 ORTHO05D007586 1.1e-06 59.3 119 31.9
BcaC07g38446 Brassica carinata HOM05D001069 ORTHO05D007586 1.4e-06 58.9 125 31.2
BcaNung06267 Brassica carinata HOM05D001069 ORTHO05D007586 1.4e-06 58.9 123 32.5
C08p12160 Brassica napus HOM05D001069 ORTHO05D007586 1.4e-06 58.9 125 31.2
Glyma.10G162900 Glycine max HOM05D001069 ORTHO05D007586 1.4e-06 58.9 119 31.9
BolC5t29444H Brassica oleracea HOM05D001069 ORTHO05D007586 1.9e-06 58.5 117 34.2
BraA06t23778Z Brassica rapa HOM05D001069 ORTHO05D007586 1.9e-06 58.5 117 34.2
Cc02_g30720 Coffea canephora HOM05D001069 ORTHO05D007586 1.9e-06 58.5 126 31.0
COL.COLO4_15368 Corchorus olitorius HOM05D001069 ORTHO05D007586 1.9e-06 58.5 119 31.9
Duzib177G1121 Durio zibethinus HOM05D001069 ORTHO05D007586 1.9e-06 58.5 119 32.8
Eucgr.H04324 Eucalyptus grandis HOM05D001069 ORTHO05D007586 1.9e-06 58.5 119 32.8
Glyma.20G225500 Glycine max HOM05D001069 ORTHO05D007586 1.9e-06 58.5 119 31.9
MD04G1225700 Malus domestica HOM05D001069 ORTHO05D007586 1.9e-06 58.5 119 32.8
Manes.09G151800 Manihot esculenta HOM05D001069 ORTHO05D007586 1.9e-06 58.5 119 31.9
unitig_52.g17389 Utricularia gibba HOM05D001069 ORTHO05D007586 1.9e-06 58.5 125 32.0
ATR0665G433 Amborella trichopoda HOM05D001069 ORTHO05D007586 2.4e-06 58.2 118 33.9
MD12G1242900 Malus domestica HOM05D001069 ORTHO05D007586 2.4e-06 58.2 119 32.8
Phvul.007G187900 Phaseolus vulgaris HOM05D001069 ORTHO05D007586 2.4e-06 58.2 119 32.8
Lalb_Chr21g0311011 Lupinus albus HOM05D001069 ORTHO05D007586 3.2e-06 57.8 119 31.1
Potri.005G054500 Populus trichocarpa HOM05D001069 ORTHO05D007586 3.2e-06 57.8 116 32.8
Thecc.05G281200 Theobroma cacao HOM05D001069 ORTHO05D007586 3.2e-06 57.8 119 32.8
Atru.chr2.835 Acer truncatum HOM05D001069 ORTHO05D007586 4.1e-06 57.4 119 31.9
ECA233G1896 Erigeron canadensis HOM05D000316 ORTHO05D000374 4.1e-06 57.4 120 32.5
SGA_v2.0_scaffold5G02970 Striga asiatica HOM05D001069 ORTHO05D007586 4.1e-06 57.4 126 31.0
Cfa006409 Carpinus fangiana HOM05D001069 ORTHO05D001549 5.4e-06 57.0 119 31.9
Os03g0628900 Oryza sativa ssp. japonica HOM05D001069 ORTHO05D007586 5.4e-06 57.0 119 31.9
Sc09g0003960 Simmondsia chinensis HOM05D001069 ORTHO05D007586 5.4e-06 57.0 121 31.4
CSS0013670 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 7.0e-06 56.6 119 31.9
CSS0018717 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 7.0e-06 56.6 119 31.9
CANSAT54G2612 Cannabis sativa HOM05D001069 ORTHO05D007586 7.0e-06 56.6 119 31.9
CAN.G134.94 Capsicum annuum HOM05D001069 ORTHO05D007586 7.0e-06 56.6 126 30.2
Haze_04370 Corylus avellana HOM05D001069 ORTHO05D007586 7.0e-06 56.6 130 30.8
DCAR_006651 Daucus carota HOM05D001069 ORTHO05D007586 7.0e-06 56.6 120 31.7
Prupe.6G344500 Prunus persica HOM05D001069 ORTHO05D007586 7.0e-06 56.6 119 31.9
MSTRG.20449 Avicennia marina HOM05D001069 ORTHO05D007586 9.2e-06 56.2 126 30.2
Nitab4.5_0001592g0010 Nicotiana tabacum HOM05D001069 ORTHO05D007586 9.2e-06 56.2 131 31.3
RcHm_v2.0_Chr3g0450701 Rosa chinensis HOM05D001069 ORTHO05D007586 9.2e-06 56.2 119 31.9
Sed0020567 Sechium edule HOM05D001069 ORTHO05D007586 9.2e-06 56.2 119 31.9


User provided reference genes

Program Settings