Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022653 Carpinus fangiana HOM05D003994 ORTHO05D004957 2.7e-158 562.0 288 100.0
CAN.G940.12 Capsicum annuum HOM05D003994 ORTHO05D004957 1.4e-29 134.4 157 44.6
Solyc08g005985.1 Solanum lycopersicum HOM05D003994 ORTHO05D004957 4.0e-29 132.9 157 44.6
Sopen08g001960 Solanum pennellii HOM05D003994 ORTHO05D004957 4.0e-29 132.9 157 44.6
PGSC0003DMG401014852 Solanum tuberosum HOM05D003994 ORTHO05D004957 4.0e-29 132.9 157 44.6
Gohir.D01G159750 Gossypium hirsutum HOM05D003994 ORTHO05D004957 8.9e-29 131.7 249 34.9
Gorai.002G198300 Gossypium raimondii HOM05D003994 ORTHO05D004957 8.9e-29 131.7 249 34.9
Manes.04G058800 Manihot esculenta HOM05D003994 ORTHO05D004957 2.0e-28 130.6 168 41.1
Nitab4.5_0001225g0220 Nicotiana tabacum HOM05D003994 ORTHO05D004957 2.6e-28 130.2 157 43.3
Nitab4.5_0001583g0200 Nicotiana tabacum HOM05D003994 ORTHO05D004957 2.6e-28 130.2 157 43.3
A07p32200 Brassica napus HOM05D003994 ORTHO05D004957 3.4e-28 129.8 163 44.8
Lalb_Chr19g0139051 Lupinus albus HOM05D003994 ORTHO05D004957 3.4e-28 129.8 158 44.3
Gohir.A01G168900 Gossypium hirsutum HOM05D003994 ORTHO05D004957 5.7e-28 129.0 249 34.5
Atru.chr5.3321 Acer truncatum HOM05D003994 ORTHO05D004957 7.5e-28 128.6 194 39.2
BcaB03g15393 Brassica carinata HOM05D003994 ORTHO05D004957 7.5e-28 128.6 163 44.2
Duzib248G0985 Durio zibethinus HOM05D003994 ORTHO05D004957 7.5e-28 128.6 261 34.1
BcaB03g15140 Brassica carinata HOM05D003994 ORTHO05D004957 9.8e-28 128.3 163 44.2
Lalb_Chr01g0001921 Lupinus albus HOM05D003994 ORTHO05D004957 9.8e-28 128.3 157 42.7
PSO017G2109 Papaver somniferum HOM05D003994 ORTHO05D004957 9.8e-28 128.3 175 41.1
TWI79G1032 Tripterygium wilfordii HOM05D003994 ORTHO05D004957 9.8e-28 128.3 168 42.9
COL.COLO4_17341 Corchorus olitorius HOM05D003994 ORTHO05D004957 1.3e-27 127.9 260 33.1
Thhalv10019092m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 1.3e-27 127.9 168 42.9
PSO675G5603 Papaver somniferum HOM05D003994 ORTHO05D004957 1.3e-27 127.9 175 40.6
Potri.009G135500 Populus trichocarpa HOM05D003994 ORTHO05D004957 1.3e-27 127.9 236 32.6
Rhsim12G0069500 Rhododendron simsii HOM05D003994 ORTHO05D004957 1.3e-27 127.9 157 42.0
C06p37970 Brassica napus HOM05D003994 ORTHO05D004957 1.7e-27 127.5 157 44.6
CSS0002177 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 1.7e-27 127.5 157 43.3
CSS0048612 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 1.7e-27 127.5 157 43.3
Lalb_Chr03g0025191 Lupinus albus HOM05D003994 ORTHO05D004957 1.7e-27 127.5 250 34.0
SGA_v2.0_scaffold16G07672 Striga asiatica HOM05D003994 ORTHO05D004957 1.7e-27 127.5 160 40.0
SGA_v2.0_scaffold3G01602 Striga asiatica HOM05D003994 ORTHO05D004957 1.7e-27 127.5 160 40.0
TAR376G0382 Trochodendron aralioides HOM05D003994 ORTHO05D004957 1.7e-27 127.5 157 42.0
ECA234G2975 Erigeron canadensis HOM05D003994 ORTHO05D004957 2.2e-27 127.1 168 40.5
Hund16215 Selenicereus undatus HOM05D003994 ORTHO05D004957 2.2e-27 127.1 158 42.4
AL2G26920 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 2.9e-27 126.7 168 42.9
BcaB05g24329 Brassica carinata HOM05D003994 ORTHO05D004957 2.9e-27 126.7 167 43.1
BcaC03g14900 Brassica carinata HOM05D003994 ORTHO05D004957 2.9e-27 126.7 161 44.1
BolC2t08504H Brassica oleracea HOM05D003994 ORTHO05D004957 2.9e-27 126.7 161 44.1
CARHR060640 Cardamine hirsuta HOM05D003994 ORTHO05D004957 2.9e-27 126.7 168 42.9
Sp5g23020 Schrenkiella parvula HOM05D003994 ORTHO05D004957 2.9e-27 126.7 168 42.9
AT1G68000 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 3.7e-27 126.3 168 42.9
A08p24160 Brassica napus HOM05D003994 ORTHO05D004957 3.7e-27 126.3 157 43.3
BraA08t34371Z Brassica rapa HOM05D003994 ORTHO05D004957 3.7e-27 126.3 157 43.9
CANSAT56G2628 Cannabis sativa HOM05D003994 ORTHO05D004957 3.7e-27 126.3 157 41.4
Duzib052G1000 Durio zibethinus HOM05D003994 ORTHO05D004957 3.7e-27 126.3 260 33.1
RcHm_v2.0_Chr7g0224781 Rosa chinensis HOM05D003994 ORTHO05D004957 3.7e-27 126.3 157 42.0
BcaC01g00237 Brassica carinata HOM05D003994 ORTHO05D004957 4.9e-27 125.9 157 43.3
AUR62037910 Chenopodium quinoa HOM05D003994 ORTHO05D004957 4.9e-27 125.9 156 42.3
Cc09_g07710 Coffea canephora HOM05D003994 ORTHO05D004957 4.9e-27 125.9 173 42.2
Nn3g20343 Nelumbo nucifera HOM05D003994 ORTHO05D004957 4.9e-27 125.9 161 42.9
Sed0021478 Sechium edule HOM05D003994 ORTHO05D004957 4.9e-27 125.9 249 32.5
GSVIVG01024019001 Vitis vinifera HOM05D003994 ORTHO05D004957 4.9e-27 125.9 156 40.4
BcaC08g46004 Brassica carinata HOM05D003994 ORTHO05D004957 6.4e-27 125.6 157 43.9
Carub.0002s1448 Capsella rubella HOM05D003994 ORTHO05D004957 6.4e-27 125.6 168 42.3
CsaV3_2G016120 Cucumis sativus L. HOM05D003994 ORTHO05D004957 6.4e-27 125.6 157 42.0
MD05G1122300 Malus domestica HOM05D003994 ORTHO05D004957 6.4e-27 125.6 157 41.4
Rhsim05G0056700 Rhododendron simsii HOM05D003994 ORTHO05D004957 6.4e-27 125.6 157 41.4
BolC6t38896H Brassica oleracea HOM05D003994 ORTHO05D004957 8.3e-27 125.2 157 43.9
HanXRQChr16g0514761 Helianthus annuus HOM05D003994 ORTHO05D004957 8.3e-27 125.2 160 41.9
Hma1.2p1_0163F.1_g072490 Hydrangea macrophylla HOM05D003994 ORTHO05D004957 8.3e-27 125.2 157 42.0
MD10G1124800 Malus domestica HOM05D003994 ORTHO05D004957 8.3e-27 125.2 157 42.0
Prupe.7G263800 Prunus persica HOM05D003994 ORTHO05D004957 8.3e-27 125.2 157 42.0
CiPaw.06G111900 Carya illinoinensis HOM05D003994 ORTHO05D004957 1.1e-26 124.8 158 42.4
HanXRQChr10g0295951 Helianthus annuus HOM05D003994 ORTHO05D004957 1.1e-26 124.8 168 41.1
Thecc.02G059800 Theobroma cacao HOM05D003994 ORTHO05D004957 1.1e-26 124.8 249 32.9
EL10Ac9g21377 Beta vulgaris HOM05D003994 ORTHO05D004957 1.4e-26 124.4 157 43.9
CiPaw.05G082400 Carya illinoinensis HOM05D003994 ORTHO05D004957 1.4e-26 124.4 168 39.9
FvH4_2g13710 Fragaria vesca HOM05D003994 ORTHO05D004957 1.4e-26 124.4 157 41.4
PGR042G1915 Punica granatum HOM05D003994 ORTHO05D004957 1.4e-26 124.4 235 32.8
Sc08g0002910 Simmondsia chinensis HOM05D003994 ORTHO05D004957 1.4e-26 124.4 236 36.0
Aqoxy4G01712 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 1.8e-26 124.0 167 39.5
AT4G38570 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 1.8e-26 124.0 157 43.3
DCAR_025322 Daucus carota HOM05D003994 ORTHO05D004957 1.8e-26 124.0 156 42.9
Aqoxy1G00146 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 2.4e-26 123.6 167 39.5
CANSAT25G2109 Cannabis sativa HOM05D003994 ORTHO05D004957 2.4e-26 123.6 249 31.7
CDE05G3005 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 3.2e-26 123.2 152 45.4
Potri.004G175600 Populus trichocarpa HOM05D003994 ORTHO05D004957 3.2e-26 123.2 236 33.9
FvH4_2g14000 Fragaria vesca HOM05D003994 ORTHO05D004957 4.1e-26 122.9 157 40.8
FAN20G1157 Fragaria x ananassa HOM05D003994 ORTHO05D004957 4.1e-26 122.9 157 40.8
FAN27G1606 Fragaria x ananassa HOM05D003994 ORTHO05D004957 4.1e-26 122.9 157 40.8
Lsat_1_v5_gn_8_167161 Lactuca sativa HOM05D003994 ORTHO05D004957 4.1e-26 122.9 160 40.6
Sed0013006 Sechium edule HOM05D003994 ORTHO05D004957 4.1e-26 122.9 249 31.7
Aa31LG6G16590 Aethionema arabicum HOM05D003994 ORTHO05D004957 5.4e-26 122.5 157 42.0
Cfa005247 Carpinus fangiana HOM05D003994 ORTHO05D004957 5.4e-26 122.5 157 38.9
Haze_02136 Corylus avellana HOM05D003994 ORTHO05D004957 5.4e-26 122.5 157 38.9
Phvul.011G036100 Phaseolus vulgaris HOM05D003994 ORTHO05D004957 5.4e-26 122.5 157 41.4
Carub.0007s0044 Capsella rubella HOM05D003994 ORTHO05D004957 7.0e-26 122.1 169 40.8
Ca_19074_v3 Cicer arietinum L. HOM05D003994 ORTHO05D004957 7.0e-26 122.1 249 31.7
THA.LOC104824762 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 7.0e-26 122.1 157 42.7
MSTRG.27636 Avicennia marina HOM05D003994 ORTHO05D004957 9.2e-26 121.7 156 41.0
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 9.2e-26 121.7 156 41.7
Thhalv10026160m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 9.2e-26 121.7 168 40.5
Sp7g37200 Schrenkiella parvula HOM05D003994 ORTHO05D004957 9.2e-26 121.7 168 41.1
HPP92_004513 Vanilla planifolia HOM05D003994 ORTHO05D004957 1.2e-25 121.3 156 41.7
Eucgr.I01421 Eucalyptus grandis HOM05D003994 ORTHO05D004957 1.6e-25 120.9 166 40.4
ATR0307G066 Amborella trichopoda HOM05D003994 ORTHO05D004957 2.0e-25 120.6 156 42.3
Migut.N01321 Erythranthe guttata HOM05D003994 ORTHO05D004957 2.0e-25 120.6 157 40.1
Pp3c3_18340 Physcomitrium patens HOM05D003994 ORTHO05D004957 2.0e-25 120.6 236 34.3
TAR629G0599 Trochodendron aralioides HOM05D003994 ORTHO05D004957 2.7e-25 120.2 157 41.4
QL11p050712 Quercus lobata HOM05D003994 ORTHO05D004957 5.9e-25 119.0 157 40.1
Glyma.11G091200 Glycine max HOM05D003994 ORTHO05D004957 7.8e-25 118.6 157 40.8
Oeu061402.1 Olea europaea HOM05D003994 ORTHO05D004957 7.8e-25 118.6 157 40.8
Oeu005708.1 Olea europaea HOM05D003994 ORTHO05D004957 1.0e-24 118.2 157 40.1
Os02g0123600 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D004957 1.0e-24 118.2 163 39.9
Medtr4g073020 Medicago truncatula HOM05D003994 ORTHO05D004957 1.3e-24 117.9 157 40.1
PGR142G1861 Punica granatum HOM05D003994 ORTHO05D004957 1.3e-24 117.9 170 39.4
Zm00001eb274200 Zea mays HOM05D003994 ORTHO05D004957 1.3e-24 117.9 157 42.0
PRCOL_00004558 Prasinoderma coloniale HOM05D003994 ORTHO05D004957 1.7e-24 117.5 172 39.5
TPR.G39214 Trifolium pratense HOM05D003994 ORTHO05D004957 1.7e-24 117.5 157 40.1
Mapoly0071s0023 Marchantia polymorpha HOM05D003994 ORTHO05D004957 2.3e-24 117.1 275 31.6
TPR.G38794 Trifolium pratense HOM05D003994 ORTHO05D004957 2.3e-24 117.1 157 39.5
Actinidia00624 Actinidia chinensis HOM05D003994 ORTHO05D004957 3.0e-24 116.7 171 38.0
Ah.01g023020 Amaranthus hybridus HOM05D003994 ORTHO05D004957 3.0e-24 116.7 165 42.4
Psat7g138440 Pisum sativum HOM05D003994 ORTHO05D004957 3.0e-24 116.7 232 32.8
MCO09G063 Micromonas commoda HOM05D003994 ORTHO05D004957 5.0e-24 115.9 284 31.3
Cre10.g419800 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D004957 6.6e-24 115.5 252 31.7
vmacro17345 Vaccinium macrocarpon HOM05D003994 ORTHO05D004957 1.9e-23 114.0 147 40.8
arahy.Tifrunner.gnm1.ann1.VZUK08 Arachis hypogaea HOM05D003994 ORTHO05D004957 3.3e-23 113.2 164 39.6
SMO112G0024 Selaginella moellendorffii HOM05D003994 ORTHO05D004957 3.3e-23 113.2 160 40.6
Lj3g0010701 Lotus japonicus HOM05D003994 ORTHO05D004957 4.3e-23 112.8 158 38.6
Pp3c4_10100 Physcomitrium patens HOM05D003994 ORTHO05D004957 5.6e-23 112.5 157 41.4
C02p23750 Brassica napus HOM05D003994 ORTHO05D004957 1.2e-22 111.3 185 38.9
ClCG02G011950 Citrullus lanatus HOM05D003994 ORTHO05D004957 1.2e-22 111.3 178 36.5
A02p14650 Brassica napus HOM05D003994 ORTHO05D004957 1.6e-22 110.9 151 42.4
BraA02t06532Z Brassica rapa HOM05D003994 ORTHO05D004957 1.6e-22 110.9 151 42.4
C03p77150 Brassica napus HOM05D003994 ORTHO05D004957 2.1e-22 110.5 125 48.0
unitig_749.g13986 Utricularia gibba HOM05D003994 ORTHO05D004957 2.1e-22 110.5 147 42.2
CBR_g32608 Chara braunii HOM05D003994 ORTHO05D004957 8.0e-22 108.6 155 38.1
Lsat_1_v5_gn_5_108021 Lactuca sativa HOM05D003994 ORTHO05D004957 1.0e-21 108.2 158 38.0
arahy.Tifrunner.gnm1.ann1.U045QQ Arachis hypogaea HOM05D003994 ORTHO05D004957 1.4e-21 107.8 117 47.0
CARHR294300 Cardamine hirsuta HOM05D003994 ORTHO05D004957 1.4e-21 107.8 146 41.8
arahy.Tifrunner.gnm1.ann1.L07Y4L Arachis hypogaea HOM05D003994 ORTHO05D004957 2.3e-21 107.1 157 38.2
A07p34510 Brassica napus HOM05D003994 ORTHO05D004957 2.3e-21 107.1 145 43.4
VMungo1127G1708 Vigna mungo HOM05D003994 ORTHO05D004957 2.3e-21 107.1 147 38.8
AUR62040162 Chenopodium quinoa HOM05D003994 ORTHO05D004957 4.0e-21 106.3 250 31.2
Glyma.12G033500 Glycine max HOM05D003994 ORTHO05D004957 4.0e-21 106.3 124 44.4
SalBow3G1772 Salvia bowleyana HOM05D003994 ORTHO05D004957 6.8e-21 105.5 147 40.1
FAN24G3352 Fragaria x ananassa HOM05D003994 ORTHO05D004957 8.9e-21 105.1 157 36.9
CDE05G1389 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 1.2e-20 104.8 159 42.1
Dinv43046 Davidia involucrata HOM05D003225 ORTHO05D003818 1.5e-20 104.4 186 34.4
FAN15G2236 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.6e-20 103.6 157 36.3
Sabra04G0117500 Salix brachista HOM05D003994 ORTHO05D004957 4.4e-20 102.8 236 30.5
EL10Ac7g18178 Beta vulgaris HOM05D003994 ORTHO05D004957 2.2e-19 100.5 142 38.7
MELO3C020821.2 Cucumis melo HOM05D003994 ORTHO05D004957 4.9e-19 99.4 168 35.7
SHI32381 Sapria himalayana HOM05D003994 ORTHO05D004957 8.3e-19 98.6 154 35.1
FAN24G0721 Fragaria x ananassa HOM05D003994 ORTHO05D004957 3.2e-18 96.7 192 31.8
Zm00001eb389940 Zea mays HOM05D003994 ORTHO05D004957 5.4e-18 95.9 106 49.1
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 7.0e-18 95.5 125 44.0
Sabra09G0105200 Salix brachista HOM05D003994 ORTHO05D004957 6.0e-17 92.4 258 25.6
MBI02_g21865_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 7.8e-17 92.0 157 38.2
SGA_v2.0_scaffold243G44305 Striga asiatica HOM05D003994 ORTHO05D004957 2.3e-16 90.5 132 37.1
BcaC08g46226 Brassica carinata HOM05D003994 ORTHO05D004957 1.1e-15 88.2 115 47.8
C03p25490 Brassica napus HOM05D003994 ORTHO05D004957 1.6e-14 84.3 127 37.0
Lj5C178T13 Lonicera japonica HOM05D003994 ORTHO05D004957 4.7e-14 82.8 99 42.4
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 1.2e-12 78.2 99 42.4
Peaxi162Scf00045g00144 Petunia axillaris HOM05D003994 ORTHO05D004957 1.2e-12 78.2 157 33.8
BcaNung05108 Brassica carinata HOM05D003994 ORTHO05D004957 2.6e-12 77.0 117 44.4
arahy.Tifrunner.gnm1.ann1.8L0F4Y Arachis hypogaea HOM05D003994 ORTHO05D004957 1.4e-10 71.2 74 50.0
SalBow5G5214 Salvia bowleyana HOM05D003994 ORTHO05D004957 1.9e-10 70.9 127 33.9
Cpa.g.sc37.130 Carica papaya HOM05D003994 ORTHO05D004957 2.4e-10 70.5 186 29.6
SalBow3G2361 Salvia bowleyana HOM05D003994 ORTHO05D004957 3.2e-10 70.1 175 32.6
BolC3t19967H Brassica oleracea HOM05D003994 ORTHO05D004957 3.5e-09 66.6 130 37.7
FAN15G2231 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.7e-08 64.3 99 35.4
CBR_g3510 Chara braunii HOM05D003994 ORTHO05D043992 1.9e-07 60.8 118 34.7
MBI11_g13142_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 6.2e-06 55.8 212 25.5


User provided reference genes

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