Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022651 Carpinus fangiana HOM05D002816 ORTHO05D122763 0.0e+00 4062.3 2014 100.0
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 5.4e-16 92.0 753 19.3
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 9.3e-16 91.3 827 21.0
AagrBONN_evm.TU.Sc2ySwM_344.2583 Anthoceros agrestis HOM05D002816 ORTHO05D005633 2.1e-15 90.1 599 23.0
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 7.9e-15 88.2 589 22.1
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 6.7e-14 85.1 669 20.6
Lsat_1_v5_gn_6_50161 Lactuca sativa HOM05D002816 ORTHO05D005633 2.8e-12 79.7 670 20.6
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 9.0e-11 74.7 535 22.4
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 3.4e-10 72.8 615 21.3
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 1.3e-09 70.9 649 19.3
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 1.7e-09 70.5 772 20.2
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 4.9e-09 68.9 317 21.5
Duzib116G0582 Durio zibethinus HOM05D002816 ORTHO05D009970 1.1e-08 67.8 253 25.7
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 1.4e-08 67.4 318 20.8
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 1.4e-08 67.4 401 21.7
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 3.2e-08 66.2 354 21.2
vmacro22895 Vaccinium macrocarpon HOM05D002816 ORTHO05D005633 3.2e-08 66.2 343 24.5
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 5.5e-08 65.5 318 20.4
SMO115G0335 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 5.5e-08 65.5 91 39.6
CAN.G396.13 Capsicum annuum HOM05D002719 ORTHO05D002938 7.1e-08 65.1 605 20.2
CAN.G396.5 Capsicum annuum HOM05D002719 ORTHO05D002938 7.1e-08 65.1 233 27.0
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 7.1e-08 65.1 322 23.3
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 7.1e-08 65.1 355 22.3
SMO166G0063 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 7.1e-08 65.1 91 39.6
Psat5g289080 Pisum sativum HOM05D002816 ORTHO05D005633 9.3e-08 64.7 235 24.7
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 1.2e-07 64.3 233 24.9
CSS0039119 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.6e-07 63.9 648 21.3
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 2.1e-07 63.5 684 19.7
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 2.1e-07 63.5 413 22.0
Duzib150G1626 Durio zibethinus HOM05D002816 ORTHO05D005633 2.7e-07 63.2 235 23.4
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 2.7e-07 63.2 271 23.2
AagrBONN_evm.TU.Sc2ySwM_362.1007 Anthoceros agrestis HOM05D002816 ORTHO05D009970 3.5e-07 62.8 89 39.3
SMO202G0013 Selaginella moellendorffii HOM05D002816 ORTHO05D009970 4.6e-07 62.4 227 23.3
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 6.0e-07 62.0 413 21.5
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 7.9e-07 61.6 271 22.9
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 7.9e-07 61.6 257 23.3
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 7.9e-07 61.6 491 20.8
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 1.0e-06 61.2 91 33.0
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 3.0e-06 59.7 271 22.5
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 3.9e-06 59.3 307 21.8
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 3.9e-06 59.3 499 21.0
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 5.1e-06 58.9 258 23.3
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 8.7e-06 58.2 344 21.5


User provided reference genes

Program Settings