Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022650 Carpinus fangiana HOM05D000457 ORTHO05D123701 0.0e+00 1275.4 627 100.0
Cfa027052 Carpinus fangiana HOM05D000144 ORTHO05D125675 3.0e-29 134.4 430 24.9
Cfa027054 Carpinus fangiana HOM05D000457 ORTHO05D124235 1.3e-13 82.4 449 21.6
Nitab4.5_0001793g0150 Nicotiana tabacum HOM05D000457 ORTHO05D000560 6.9e-10 70.1 404 23.0
Nitab4.5_0003703g0010 Nicotiana tabacum HOM05D000457 ORTHO05D000560 1.2e-09 69.3 404 23.0
Pp3c9_40 Physcomitrium patens HOM05D000457 ORTHO05D000560 1.2e-09 69.3 372 22.6
Lsat_1_v5_gn_9_57461 Lactuca sativa HOM05D000457 ORTHO05D000560 1.5e-09 68.9 332 23.8
PSO782G4475 Papaver somniferum HOM05D000457 ORTHO05D000560 2.6e-09 68.2 399 22.1
SEGI_13847 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 3.4e-09 67.8 356 23.9
Lj3g0014017 Lotus japonicus HOM05D000457 ORTHO05D000560 1.0e-08 66.2 384 22.4
Cc04_g11700 Coffea canephora HOM05D000457 ORTHO05D000560 1.3e-08 65.9 392 22.4
HanXRQChr09g0252491 Helianthus annuus HOM05D000457 ORTHO05D000560 1.7e-08 65.5 372 23.4
Mapoly0047s0055 Marchantia polymorpha HOM05D000457 ORTHO05D000560 2.9e-08 64.7 377 20.7
Mapoly0047s0057 Marchantia polymorpha HOM05D000457 ORTHO05D000560 2.9e-08 64.7 377 21.0
GSVIVG01026991001 Vitis vinifera HOM05D000457 ORTHO05D000560 2.9e-08 64.7 465 20.9
AUR62031405 Chenopodium quinoa HOM05D000457 ORTHO05D000560 3.8e-08 64.3 356 21.3
Migut.O00149 Erythranthe guttata HOM05D000457 ORTHO05D000560 4.9e-08 63.9 383 20.4
PSO111G0031 Papaver somniferum HOM05D000457 ORTHO05D000560 4.9e-08 63.9 398 22.4
Dinv38538 Davidia involucrata HOM05D000457 ORTHO05D000560 6.5e-08 63.5 414 22.2
Rhsim11G0055800 Rhododendron simsii HOM05D000457 ORTHO05D000560 6.5e-08 63.5 466 22.7
Mapoly0135s0045 Marchantia polymorpha HOM05D000457 ORTHO05D000560 1.1e-07 62.8 377 20.7
Lj3g0010852 Lotus japonicus HOM05D000457 ORTHO05D000560 1.4e-07 62.4 408 22.8
PGSC0003DMG400018114 Solanum tuberosum HOM05D000457 ORTHO05D000560 2.5e-07 61.6 403 21.3
Ciclev10006989m.g Citrus clementina HOM05D000457 ORTHO05D000560 3.2e-07 61.2 389 22.6
vmacro19311 Vaccinium macrocarpon HOM05D000457 ORTHO05D000560 3.2e-07 61.2 389 24.2
Glyma.07G067700 Glycine max HOM05D000457 ORTHO05D000560 4.2e-07 60.8 409 21.5
Peaxi162Scf00020g01031 Petunia axillaris HOM05D000457 ORTHO05D000560 4.2e-07 60.8 278 24.8
Peaxi162Scf41243g00006 Petunia axillaris HOM05D000457 ORTHO05D000560 4.2e-07 60.8 278 24.8
GSVIVG01026993001 Vitis vinifera HOM05D000457 ORTHO05D000560 4.2e-07 60.8 301 23.6
AagrBONN_evm.TU.Sc2ySwM_228.5044 Anthoceros agrestis HOM05D000457 ORTHO05D000560 5.5e-07 60.5 352 22.4
Cfa003891 Carpinus fangiana HOM05D000457 ORTHO05D000560 5.5e-07 60.5 354 23.4
VMungo0331G1582 Vigna mungo HOM05D000457 ORTHO05D000560 5.5e-07 60.5 345 20.9
CSS0021656 Camellia sinensis var. sinensis HOM05D000457 ORTHO05D000560 7.1e-07 60.1 326 24.8
CAN.G78.103 Capsicum annuum HOM05D000457 ORTHO05D000560 7.1e-07 60.1 400 22.5
Cc02_g38380 Coffea canephora HOM05D000457 ORTHO05D000560 7.1e-07 60.1 359 23.1
Psat4g211840 Pisum sativum HOM05D000457 ORTHO05D000560 7.1e-07 60.1 345 22.0
Sabra12G0061000 Salix brachista HOM05D000457 ORTHO05D000560 7.1e-07 60.1 396 22.5
Migut.B01783 Erythranthe guttata HOM05D000457 ORTHO05D000560 9.3e-07 59.7 405 21.2
PGR044G2752 Punica granatum HOM05D000457 ORTHO05D000560 9.3e-07 59.7 391 21.5
Sopen01g038670 Solanum pennellii HOM05D000457 ORTHO05D000560 9.3e-07 59.7 263 24.7
arahy.Tifrunner.gnm1.ann1.RAFL9Y Arachis hypogaea HOM05D000457 ORTHO05D000560 1.2e-06 59.3 366 21.3
MBI11_g05795_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D000560 1.2e-06 59.3 393 23.4
Mapoly0059s0068 Marchantia polymorpha HOM05D000457 ORTHO05D000560 1.2e-06 59.3 343 20.4
Phvul.010G101500 Phaseolus vulgaris HOM05D000457 ORTHO05D000560 1.2e-06 59.3 361 22.2
Psat6g196560 Pisum sativum HOM05D000457 ORTHO05D000560 1.2e-06 59.3 382 20.7
Solyc01g094890.4 Solanum lycopersicum HOM05D000457 ORTHO05D000560 1.6e-06 58.9 263 24.3
THA.LOC104818163 Tarenaya hassleriana HOM05D000457 ORTHO05D000560 1.6e-06 58.9 356 23.3
GSVIVG01028873001 Vitis vinifera HOM05D000457 ORTHO05D000560 1.6e-06 58.9 431 23.7
EL10Ac3g05436 Beta vulgaris HOM05D000457 ORTHO05D000560 2.1e-06 58.5 260 23.5
Migut.B01781 Erythranthe guttata HOM05D000457 ORTHO05D000560 2.1e-06 58.5 352 22.2
Lalb_Chr17g0339321 Lupinus albus HOM05D000457 ORTHO05D000560 2.1e-06 58.5 348 22.4
AT5G23990 Arabidopsis thaliana HOM05D000457 ORTHO05D000560 2.7e-06 58.2 318 22.3
Phvul.007G073900 Phaseolus vulgaris HOM05D000457 ORTHO05D000560 2.7e-06 58.2 353 22.4
AL6G35310 Arabidopsis lyrata HOM05D000457 ORTHO05D000560 3.5e-06 57.8 307 21.8
Ciclev10019053m.g Citrus clementina HOM05D000457 ORTHO05D000560 3.5e-06 57.8 380 22.6
Lalb_Chr17g0339341 Lupinus albus HOM05D000457 ORTHO05D000560 3.5e-06 57.8 348 22.1
TAR629G1742 Trochodendron aralioides HOM05D000457 ORTHO05D000560 3.5e-06 57.8 387 21.2
vmacro20911 Vaccinium macrocarpon HOM05D000457 ORTHO05D000560 3.5e-06 57.8 404 22.0
Oeu045368.1 Olea europaea HOM05D000457 ORTHO05D000560 4.6e-06 57.4 349 20.6
MSTRG.20848 Avicennia marina HOM05D000457 ORTHO05D000560 6.0e-06 57.0 390 22.3
CANSAT21G0434 Cannabis sativa HOM05D000457 ORTHO05D000560 6.0e-06 57.0 445 23.1
Medtr1g100150 Medicago truncatula HOM05D000457 ORTHO05D000560 6.0e-06 57.0 387 21.4
RcHm_v2.0_Chr1g0356941 Rosa chinensis HOM05D000457 ORTHO05D000560 6.0e-06 57.0 376 20.7
AT5G23980 Arabidopsis thaliana HOM05D000457 ORTHO05D000560 7.9e-06 56.6 310 22.6
Nitab4.5_0000583g0340 Nicotiana tabacum HOM05D000457 ORTHO05D000560 7.9e-06 56.6 400 22.2
Sabra14G0063800 Salix brachista HOM05D000457 ORTHO05D000560 7.9e-06 56.6 444 21.8
Sp5g12950 Schrenkiella parvula HOM05D000457 ORTHO05D000560 7.9e-06 56.6 316 23.7


User provided reference genes

Program Settings