Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022588 Carpinus fangiana HOM05D004604 ORTHO05D005744 3.1e-295 1017.7 507 100.0
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 1.9e-34 151.4 327 29.7
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 5.9e-28 129.8 181 39.8
MCO15G553 Micromonas commoda HOM05D004604 ORTHO05D005744 1.7e-27 128.3 299 31.8
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 2.3e-27 127.9 213 34.7
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 2.9e-27 127.5 177 40.1
A10p30660 Brassica napus HOM05D004604 ORTHO05D005744 5.0e-27 126.7 423 25.8
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 5.0e-27 126.7 363 28.1
unitig_62.g23928 Utricularia gibba HOM05D004604 ORTHO05D005744 6.6e-27 126.3 203 34.5
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 8.6e-27 125.9 239 31.0
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 1.1e-26 125.6 185 36.8
Peaxi162Scf01208g00144 Petunia axillaris HOM05D004604 ORTHO05D005744 1.1e-26 125.6 194 38.1
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 1.5e-26 125.2 159 41.5
AT5G05700 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 1.9e-26 124.8 186 38.2
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 2.5e-26 124.4 157 40.1
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 2.5e-26 124.4 170 38.8
Migut.F01374 Erythranthe guttata HOM05D004604 ORTHO05D005744 2.5e-26 124.4 166 41.0
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 2.5e-26 124.4 166 38.0
BcaC06g32278 Brassica carinata HOM05D004604 ORTHO05D005744 3.3e-26 124.0 426 26.1
BraA10t45107Z Brassica rapa HOM05D004604 ORTHO05D005744 3.3e-26 124.0 423 26.5
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla HOM05D004604 ORTHO05D005744 4.3e-26 123.6 158 37.3
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 4.3e-26 123.6 160 40.0
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 5.6e-26 123.2 163 39.9
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 5.6e-26 123.2 166 40.4
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 5.6e-26 123.2 166 37.3
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 5.6e-26 123.2 158 38.6
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 7.3e-26 122.9 158 40.5
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 9.5e-26 122.5 158 38.6
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 9.5e-26 122.5 177 39.0
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 1.2e-25 122.1 158 39.2
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 1.2e-25 122.1 158 39.2
Hund13846 Selenicereus undatus HOM05D004604 ORTHO05D005744 1.2e-25 122.1 183 36.6
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis HOM05D004604 ORTHO05D005744 1.6e-25 121.7 190 35.3
DCAR_028567 Daucus carota HOM05D004604 ORTHO05D005744 1.6e-25 121.7 193 36.8
C09p71140 Brassica napus HOM05D004604 ORTHO05D005744 2.1e-25 121.3 186 37.1
BolC9t59876H Brassica oleracea HOM05D004604 ORTHO05D005744 2.1e-25 121.3 186 37.1
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 2.1e-25 121.3 158 38.0
Thhalv10013820m.g Eutrema salsugineum HOM05D004604 ORTHO05D005744 2.1e-25 121.3 158 40.5
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 2.1e-25 121.3 158 38.0
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.8e-25 120.9 158 38.0
SEGI_28443 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 2.8e-25 120.9 167 36.5
SEGI_33236 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 2.8e-25 120.9 167 36.5
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 3.6e-25 120.6 158 37.3
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 3.6e-25 120.6 158 38.0
Mapoly0067s0057 Marchantia polymorpha HOM05D004604 ORTHO05D005744 3.6e-25 120.6 197 33.5
PSO339G2357 Papaver somniferum HOM05D004604 ORTHO05D005744 3.6e-25 120.6 158 38.0
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea HOM05D004604 ORTHO05D005744 4.7e-25 120.2 163 35.6
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 4.7e-25 120.2 163 35.6
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 4.7e-25 120.2 196 35.2
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 4.7e-25 120.2 196 35.2
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 4.7e-25 120.2 196 35.2
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 4.7e-25 120.2 195 34.9
CARHR207580 Cardamine hirsuta HOM05D004604 ORTHO05D005744 6.1e-25 119.8 186 36.6
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 6.1e-25 119.8 188 37.2
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 8.0e-25 119.4 162 37.0
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 1.0e-24 119.0 158 40.5
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 1.0e-24 119.0 158 38.0
Duzib114G0112 Durio zibethinus HOM05D004604 ORTHO05D005744 1.0e-24 119.0 212 33.0
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 1.0e-24 119.0 182 35.2
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 1.0e-24 119.0 158 38.6
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 1.0e-24 119.0 158 37.3
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 1.0e-24 119.0 158 37.3
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 1.0e-24 119.0 158 36.7
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 1.4e-24 118.6 158 36.7
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 1.4e-24 118.6 184 35.3
AUR62022867 Chenopodium quinoa HOM05D004604 ORTHO05D005744 1.4e-24 118.6 198 33.8
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 1.4e-24 118.6 158 38.0
Gohir.D10G247400 Gossypium hirsutum HOM05D004604 ORTHO05D005744 1.4e-24 118.6 158 38.0
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 1.4e-24 118.6 158 38.6
Hund15948 Selenicereus undatus HOM05D004604 ORTHO05D005744 1.4e-24 118.6 247 33.2
AT3G11240 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 1.8e-24 118.2 238 31.5
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 1.8e-24 118.2 163 38.7
Carub.0006s0459 Capsella rubella HOM05D004604 ORTHO05D005744 1.8e-24 118.2 184 36.4
Cpa.g.sc19.189 Carica papaya HOM05D004604 ORTHO05D005744 1.8e-24 118.2 158 37.3
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.8e-24 118.2 156 37.8
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 1.8e-24 118.2 158 38.0
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 1.8e-24 118.2 158 36.7
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 1.8e-24 118.2 158 37.3
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 2.3e-24 117.9 160 38.8
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 2.3e-24 117.9 168 36.3
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 2.3e-24 117.9 166 36.1
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 3.0e-24 117.5 175 36.6
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 3.0e-24 117.5 185 35.7
SEGI_40640 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 3.0e-24 117.5 196 34.2
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 4.0e-24 117.1 195 34.4
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 4.0e-24 117.1 158 36.1
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 5.2e-24 116.7 186 37.1
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 5.2e-24 116.7 185 35.7
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 5.2e-24 116.7 185 35.7
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 5.2e-24 116.7 158 36.7
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 5.2e-24 116.7 195 32.8
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 5.2e-24 116.7 160 38.8
Sabra08G0049200 Salix brachista HOM05D004604 ORTHO05D005744 5.2e-24 116.7 162 38.3
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 5.2e-24 116.7 158 36.7
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 6.8e-24 116.3 186 35.5
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 6.8e-24 116.3 197 34.0
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 6.8e-24 116.3 158 36.1
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 6.8e-24 116.3 158 37.3
SMO118G0549 Selaginella moellendorffii HOM05D004604 ORTHO05D005744 6.8e-24 116.3 166 38.0
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 6.8e-24 116.3 147 41.5
Cpa.g.sc19.187 Carica papaya HOM05D004604 ORTHO05D005744 8.9e-24 115.9 158 36.1
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 8.9e-24 115.9 195 33.3
Eucgr.J00227 Eucalyptus grandis HOM05D004604 ORTHO05D005744 8.9e-24 115.9 158 37.3
HanXRQChr06g0172261 Helianthus annuus HOM05D004604 ORTHO05D005744 8.9e-24 115.9 161 38.5
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 8.9e-24 115.9 158 36.7
Sc11g0007180 Simmondsia chinensis HOM05D004604 ORTHO05D005744 8.9e-24 115.9 195 34.9
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 8.9e-24 115.9 158 36.1
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 1.5e-23 115.2 346 27.2
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 2.0e-23 114.8 208 35.1
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 2.6e-23 114.4 210 32.4
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 2.6e-23 114.4 209 34.9
AUR62012235 Chenopodium quinoa HOM05D004604 ORTHO05D005744 3.4e-23 114.0 198 33.3
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 3.4e-23 114.0 345 25.8
MBI05_g34496_MAGBIO Magnolia biondii HOM05D004604 ORTHO05D005744 3.4e-23 114.0 156 37.2
Cpa.g.sc19.188 Carica papaya HOM05D004604 ORTHO05D005744 4.4e-23 113.6 159 35.2
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 5.7e-23 113.2 158 36.7
Eucgr.J00232 Eucalyptus grandis HOM05D004604 ORTHO05D005744 5.7e-23 113.2 158 37.3
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 5.7e-23 113.2 158 36.1
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 7.5e-23 112.8 177 34.5
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 7.5e-23 112.8 193 35.2
Potri.008G067000 Populus trichocarpa HOM05D004604 ORTHO05D005744 9.8e-23 112.5 162 37.0
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 9.8e-23 112.5 158 36.1
Os05g0446800 Oryza sativa ssp. japonica HOM05D004604 ORTHO05D005744 1.3e-22 112.1 183 34.4
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 1.7e-22 111.7 181 35.4
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 2.9e-22 110.9 165 34.5
Haze_17213 Corylus avellana HOM05D004604 ORTHO05D005744 2.9e-22 110.9 175 33.7
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 3.7e-22 110.5 168 36.9
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 6.4e-22 109.8 158 34.8
Eucgr.J00230 Eucalyptus grandis HOM05D004604 ORTHO05D005744 6.4e-22 109.8 158 35.4
Cre13.g580600 Chlamydomonas reinhardtii HOM05D004604 ORTHO05D005744 1.1e-21 109.0 196 34.2
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 1.4e-21 108.6 181 34.3
PRCOL_00002395 Prasinoderma coloniale HOM05D004604 ORTHO05D005744 3.5e-20 104.0 160 36.2
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 2.3e-19 101.3 240 30.0
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 2.5e-18 97.8 213 30.0
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 2.5e-18 97.8 240 29.6
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 3.3e-18 97.4 240 29.6
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 2.8e-17 94.4 207 30.0
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 3.6e-17 94.0 206 32.0
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 3.6e-17 94.0 207 30.0
CBR_g49483 Chara braunii HOM05D004604 ORTHO05D005744 1.4e-13 82.0 137 31.4
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 1.2e-07 62.4 124 29.0
arahy.Tifrunner.gnm1.ann1.3RRJ97 Arachis hypogaea HOM05D004604 ORTHO05D005744 6.4e-06 56.6 95 26.3


User provided reference genes

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