Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022569 Carpinus fangiana HOM05D020318 ORTHO05D020348 9.5e-286 986.1 478 100.0
Cre12.g496950 Chlamydomonas reinhardtii HOM05D020318 ORTHO05D020348 4.5e-70 269.6 473 35.3
CBR_g22949 Chara braunii HOM05D020318 ORTHO05D020348 6.8e-58 229.2 455 34.1
Cfa001645 Carpinus fangiana HOM05D004580 ORTHO05D020348 1.4e-50 204.9 396 32.8
Cre02.g078650 Chlamydomonas reinhardtii HOM05D020318 ORTHO05D020348 9.5e-44 182.2 475 30.1
PRCOL_00005482 Prasinoderma coloniale HOM05D020318 ORTHO05D020348 1.4e-42 178.3 461 29.3
PRCOL_00003738 Prasinoderma coloniale HOM05D020318 ORTHO05D020348 2.6e-41 174.1 439 31.0
TWI31G0511 Tripterygium wilfordii HOM05D002051 ORTHO05D002041 1.3e-08 65.5 179 29.1
CANSAT25G1142 Cannabis sativa HOM05D002051 ORTHO05D002041 1.1e-07 62.4 206 26.2
Manes.03G096900 Manihot esculenta HOM05D002051 ORTHO05D002041 1.4e-07 62.0 204 26.5
Cpa.g.sc9.389 Carica papaya HOM05D002051 ORTHO05D002041 2.4e-07 61.2 145 29.0
Ciclev10028440m.g Citrus clementina HOM05D002051 ORTHO05D002041 2.4e-07 61.2 161 28.0
FAN24G1292 Fragaria x ananassa HOM05D002051 ORTHO05D002041 3.2e-07 60.8 164 30.5
Lalb_Chr17g0337711 Lupinus albus HOM05D002051 ORTHO05D002041 4.2e-07 60.5 123 30.1
Aa31LG6G16320 Aethionema arabicum HOM05D002051 ORTHO05D002041 5.4e-07 60.1 170 26.5
Ca_12370_v3 Cicer arietinum L. HOM05D002051 ORTHO05D002041 5.4e-07 60.1 144 29.2
Psat0s4441g0080 Pisum sativum HOM05D002051 ORTHO05D002041 7.1e-07 59.7 189 25.4
RcHm_v2.0_Chr6g0281181 Rosa chinensis HOM05D002051 ORTHO05D002041 7.1e-07 59.7 166 31.3
TPR.G35531 Trifolium pratense HOM05D002051 ORTHO05D002041 7.1e-07 59.7 123 31.7
BcaNung04229 Brassica carinata HOM05D002051 ORTHO05D002041 9.3e-07 59.3 212 23.6
Eucgr.I01541 Eucalyptus grandis HOM05D002051 ORTHO05D002041 9.3e-07 59.3 132 32.6
arahy.Tifrunner.gnm1.ann1.382XQL Arachis hypogaea HOM05D002051 ORTHO05D002041 1.2e-06 58.9 144 27.8
arahy.Tifrunner.gnm1.ann1.K7J832 Arachis hypogaea HOM05D002051 ORTHO05D002041 1.2e-06 58.9 144 27.8
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 1.6e-06 58.5 208 24.0
DCAR_002347 Daucus carota HOM05D002051 ORTHO05D002041 1.6e-06 58.5 121 32.2
FvH4_2g16990 Fragaria vesca HOM05D002051 ORTHO05D002041 1.6e-06 58.5 164 29.9
Psat6g100400 Pisum sativum HOM05D002051 ORTHO05D002041 1.6e-06 58.5 138 27.5
BcaNung01315 Brassica carinata HOM05D002051 ORTHO05D002041 2.1e-06 58.2 209 23.9
BolC1t00005H Brassica oleracea HOM05D002051 ORTHO05D002041 2.1e-06 58.2 209 23.9
Medtr1g038920 Medicago truncatula HOM05D002051 ORTHO05D002041 2.1e-06 58.2 120 30.0
BraA01t00004Z Brassica rapa HOM05D002051 ORTHO05D002041 2.7e-06 57.8 209 23.9
COL.COLO4_03846 Corchorus olitorius HOM05D002051 ORTHO05D002041 2.7e-06 57.8 187 26.2
Medtr1g039010 Medicago truncatula HOM05D002051 ORTHO05D002041 2.7e-06 57.8 142 31.0
Pp3c7_6440 Physcomitrium patens HOM05D002051 ORTHO05D002041 2.7e-06 57.8 123 30.1
Atru.chr5.3575 Acer truncatum HOM05D002051 ORTHO05D002041 3.5e-06 57.4 145 26.9
Thhalv10025205m.g Eutrema salsugineum HOM05D002051 ORTHO05D002041 4.6e-06 57.0 213 23.5
SMO351G0186 Selaginella moellendorffii HOM05D002051 ORTHO05D002041 4.6e-06 57.0 184 27.7
CSS0017538 Camellia sinensis var. sinensis HOM05D002051 ORTHO05D002041 6.0e-06 56.6 225 23.1
Potri.004G208100 Populus trichocarpa HOM05D002051 ORTHO05D002041 6.0e-06 56.6 166 27.7
Manes.03G096800 Manihot esculenta HOM05D002051 ORTHO05D002041 7.9e-06 56.2 167 28.1
Mapoly0073s0072 Marchantia polymorpha HOM05D002051 ORTHO05D002041 7.9e-06 56.2 157 26.1
Sabra04G0140000 Salix brachista HOM05D002051 ORTHO05D002041 7.9e-06 56.2 150 27.3


User provided reference genes

Program Settings