Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022547 Carpinus fangiana HOM05D007618 ORTHO05D125993 3.0e-209 731.9 444 100.0
MBI17_g08340_MAGBIO Magnolia biondii HOM05D002157 ORTHO05D002197 3.7e-10 70.5 208 27.9
CsaV3_1G014860 Cucumis sativus L. HOM05D002157 ORTHO05D002197 2.4e-09 67.8 165 29.7
Sed0023645 Sechium edule HOM05D002157 ORTHO05D002197 7.1e-09 66.2 165 29.7
AUR62036190 Chenopodium quinoa HOM05D002157 ORTHO05D002197 1.2e-08 65.5 175 27.4
Lsat_1_v5_gn_6_38861 Lactuca sativa HOM05D002157 ORTHO05D002197 1.2e-08 65.5 177 29.4
Os08g0558100 Oryza sativa ssp. japonica HOM05D002157 ORTHO05D002197 1.6e-08 65.1 164 28.7
CANSAT64G2827 Cannabis sativa HOM05D007618 ORTHO05D009606 2.1e-08 64.7 149 28.9
Gohir.A08G005200 Gossypium hirsutum HOM05D002157 ORTHO05D002197 2.1e-08 64.7 169 28.4
PSO339G1345 Papaver somniferum HOM05D002157 ORTHO05D002197 2.1e-08 64.7 154 30.5
AUR62009753 Chenopodium quinoa HOM05D002157 ORTHO05D002197 2.7e-08 64.3 166 27.1
PSO384G0981 Papaver somniferum HOM05D002157 ORTHO05D002197 2.7e-08 64.3 222 29.3
VMungo1080G1729 Vigna mungo HOM05D002157 ORTHO05D002197 2.7e-08 64.3 201 26.4
Glyma.06G000700 Glycine max HOM05D007618 ORTHO05D009606 3.5e-08 63.9 153 28.1
QL11p055874 Quercus lobata HOM05D007618 ORTHO05D009606 3.5e-08 63.9 150 28.7
Sed0023624 Sechium edule HOM05D007618 ORTHO05D009606 3.5e-08 63.9 149 28.2
Aqoxy2G01178 Aquilegia oxysepala HOM05D002157 ORTHO05D002197 4.6e-08 63.5 162 29.6
ClCG01G012200 Citrullus lanatus HOM05D002157 ORTHO05D002197 4.6e-08 63.5 205 27.3
Cc01_g09090 Coffea canephora HOM05D002157 ORTHO05D002197 4.6e-08 63.5 163 27.6
Gorai.004G009900 Gossypium raimondii HOM05D002157 ORTHO05D002197 4.6e-08 63.5 169 27.8
Sc12g0004530 Simmondsia chinensis HOM05D002157 ORTHO05D002197 4.6e-08 63.5 165 26.7
CiPaw.13G135500 Carya illinoinensis HOM05D002157 ORTHO05D002197 6.0e-08 63.2 178 27.5
ClCG02G010360 Citrullus lanatus HOM05D007618 ORTHO05D009606 6.0e-08 63.2 158 27.2
Gohir.D08G015600 Gossypium hirsutum HOM05D002157 ORTHO05D002197 6.0e-08 63.2 169 27.8
Phvul.005G123400 Phaseolus vulgaris HOM05D002157 ORTHO05D002197 6.0e-08 63.2 162 27.2
Phvul.009G116000 Phaseolus vulgaris HOM05D007618 ORTHO05D009606 6.0e-08 63.2 153 27.5
Glyma.12G185400 Glycine max HOM05D002157 ORTHO05D002197 7.8e-08 62.8 193 26.9
HanXRQChr16g0526971 Helianthus annuus HOM05D002157 ORTHO05D002197 7.8e-08 62.8 171 28.1
Nitab4.5_0000755g0120 Nicotiana tabacum HOM05D002157 ORTHO05D002197 7.8e-08 62.8 171 26.9
PSO339G4678 Papaver somniferum HOM05D002157 ORTHO05D002197 7.8e-08 62.8 196 25.0
PSO384G4974 Papaver somniferum HOM05D002157 ORTHO05D002197 7.8e-08 62.8 196 25.0
Sabra09G0129500 Salix brachista HOM05D007618 ORTHO05D009606 7.8e-08 62.8 147 26.5
CsaV3_6G010180 Cucumis sativus L. HOM05D007618 ORTHO05D009606 1.0e-07 62.4 158 27.2
Glyma.13G316100 Glycine max HOM05D002157 ORTHO05D002197 1.0e-07 62.4 199 27.1
Os11g0140600 Oryza sativa ssp. japonica HOM05D002157 ORTHO05D002197 1.0e-07 62.4 166 25.9
Os12g0137100 Oryza sativa ssp. japonica HOM05D002157 ORTHO05D002197 1.0e-07 62.4 166 25.9
Sabra04G0138200 Salix brachista HOM05D007618 ORTHO05D009606 1.0e-07 62.4 147 26.5
Thecc.09G282900 Theobroma cacao HOM05D002157 ORTHO05D002197 1.0e-07 62.4 202 26.7
Zm00001eb196390 Zea mays HOM05D002157 ORTHO05D002197 1.0e-07 62.4 166 25.9
QL01p012231 Quercus lobata HOM05D002157 ORTHO05D002197 1.3e-07 62.0 170 27.6
ATR0776G091 Amborella trichopoda HOM05D002157 ORTHO05D002197 1.7e-07 61.6 137 29.9
MD10G1139000 Malus domestica HOM05D007618 ORTHO05D009606 1.7e-07 61.6 149 26.8
CiPaw.05G091300 Carya illinoinensis HOM05D007618 ORTHO05D009606 2.3e-07 61.2 149 27.5
Ciclev10029136m.g Citrus clementina HOM05D002157 ORTHO05D002197 2.3e-07 61.2 163 27.6
MELO3C013504.2 Cucumis melo HOM05D007618 ORTHO05D009606 2.3e-07 61.2 158 27.2
Hma1.2p1_0271F.1_g108950 Hydrangea macrophylla HOM05D007618 ORTHO05D009606 2.3e-07 61.2 149 26.8
Potri.009G163600 Populus trichocarpa HOM05D002157 ORTHO05D002197 2.3e-07 61.2 165 26.7
Rhsim13G0112000 Rhododendron simsii HOM05D002157 ORTHO05D002197 2.3e-07 61.2 211 28.4
Lalb_Chr08g0246841 Lupinus albus HOM05D007618 ORTHO05D009606 3.0e-07 60.8 149 26.8
Manes.04G067600 Manihot esculenta HOM05D007618 ORTHO05D009606 3.0e-07 60.8 149 26.8
Mapoly0075s0071 Marchantia polymorpha HOM05D002157 ORTHO05D002197 3.0e-07 60.8 225 28.0
Nitab4.5_0009324g0010 Nicotiana tabacum HOM05D002157 ORTHO05D002197 3.0e-07 60.8 172 27.3
Sopen11g027170 Solanum pennellii HOM05D002157 ORTHO05D002197 3.0e-07 60.8 204 24.5
TAR376G0137 Trochodendron aralioides HOM05D007618 ORTHO05D009606 3.0e-07 60.8 149 26.8
Haze_23371 Corylus avellana HOM05D002157 ORTHO05D002197 3.9e-07 60.5 162 26.5
Eucgr.I02595 Eucalyptus grandis HOM05D002157 ORTHO05D002197 3.9e-07 60.5 196 27.0
Lj1g0004638 Lotus japonicus HOM05D007618 ORTHO05D009606 3.9e-07 60.5 157 27.4
GSVIVG01023981001 Vitis vinifera HOM05D007618 ORTHO05D009606 3.9e-07 60.5 155 25.2
CBR_g30676 Chara braunii HOM05D007618 ORTHO05D009606 5.1e-07 60.1 152 36.2
Potri.009G165700 Populus trichocarpa HOM05D007618 ORTHO05D009606 5.1e-07 60.1 147 26.5
GSVIVG01036121001 Vitis vinifera HOM05D002157 ORTHO05D002197 5.1e-07 60.1 148 27.7
CANSAT56G3719 Cannabis sativa HOM05D002157 ORTHO05D002197 6.6e-07 59.7 151 27.2
Dinv14162 Davidia involucrata HOM05D007618 ORTHO05D009606 6.6e-07 59.7 149 26.2
FvH4_2g16570 Fragaria vesca HOM05D007618 ORTHO05D009606 6.6e-07 59.7 149 26.2
Manes.04G002600 Manihot esculenta HOM05D002157 ORTHO05D002197 6.6e-07 59.7 212 25.9
Potri.004G204700 Populus trichocarpa HOM05D007618 ORTHO05D009606 6.6e-07 59.7 147 25.9
Hund06167 Selenicereus undatus HOM05D007618 ORTHO05D009606 6.6e-07 59.7 149 26.8
CAN.G1358.7 Capsicum annuum HOM05D002157 ORTHO05D002197 8.6e-07 59.3 175 25.7
Cfa005346 Carpinus fangiana HOM05D007618 ORTHO05D009606 8.6e-07 59.3 143 26.6
Duzib170G0387 Durio zibethinus HOM05D002157 ORTHO05D002197 8.6e-07 59.3 205 24.9
FAN27G0591 Fragaria x ananassa HOM05D007618 ORTHO05D009606 8.6e-07 59.3 149 26.2
Prupe.8G177800 Prunus persica HOM05D007618 ORTHO05D009606 8.6e-07 59.3 149 26.2
TAR628G0843 Trochodendron aralioides HOM05D007618 ORTHO05D009606 8.6e-07 59.3 149 26.2
Nitab4.5_0000783g0170 Nicotiana tabacum HOM05D007618 ORTHO05D009606 1.1e-06 58.9 149 24.8
FAN15G3577 Fragaria x ananassa HOM05D007618 ORTHO05D009606 1.5e-06 58.5 149 25.5
Manes.11G162900 Manihot esculenta HOM05D002157 ORTHO05D002197 1.5e-06 58.5 200 27.0
Mapoly0032s0019 Marchantia polymorpha HOM05D007618 ORTHO05D009606 1.5e-06 58.5 147 28.6
arahy.Tifrunner.gnm1.ann1.I7PWT1 Arachis hypogaea HOM05D007618 ORTHO05D009606 1.9e-06 58.2 149 26.8
CANSAT11G1618 Cannabis sativa HOM05D000059 ORTHO05D000128 1.9e-06 58.2 75 41.3
Ciclev10029401m.g Citrus clementina HOM05D007618 ORTHO05D009606 1.9e-06 58.2 149 26.8
Dinv42551 Davidia involucrata HOM05D002157 ORTHO05D002197 1.9e-06 58.2 196 25.5
Lj2C387T4 Lonicera japonica HOM05D002157 ORTHO05D002197 1.9e-06 58.2 183 24.6
MD00G1075300 Malus domestica HOM05D002157 ORTHO05D002197 1.9e-06 58.2 160 26.2
Nn6g31724 Nelumbo nucifera HOM05D007618 ORTHO05D009606 1.9e-06 58.2 149 26.2
PGR102G2944 Punica granatum HOM05D002157 ORTHO05D002197 1.9e-06 58.2 171 29.8
Hund18758 Selenicereus undatus HOM05D002157 ORTHO05D002197 1.9e-06 58.2 175 26.3
Solyc11g068460.2 Solanum lycopersicum HOM05D002157 ORTHO05D002197 1.9e-06 58.2 204 24.5
PGSC0003DMG400026341 Solanum tuberosum HOM05D002157 ORTHO05D002197 1.9e-06 58.2 157 26.8
Cpa.g.sc182.17 Carica papaya HOM05D002157 ORTHO05D002197 2.5e-06 57.8 171 24.6
Lj3g0017978 Lotus japonicus HOM05D002157 ORTHO05D002197 2.5e-06 57.8 195 25.1
EL10Ac9g21249 Beta vulgaris HOM05D007618 ORTHO05D009606 3.3e-06 57.4 149 25.5
Cpa.g.sc32.23 Carica papaya HOM05D002157 ORTHO05D002197 3.3e-06 57.4 220 26.4
Cfa010013 Carpinus fangiana HOM05D002157 ORTHO05D002197 3.3e-06 57.4 162 25.9
MBI08_g32524_MAGBIO Magnolia biondii HOM05D007618 ORTHO05D009606 3.3e-06 57.4 153 24.8
Peaxi162Scf00003g00415 Petunia axillaris HOM05D002157 ORTHO05D002197 3.3e-06 57.4 219 24.2
RcHm_v2.0_Chr6g0280641 Rosa chinensis HOM05D007618 ORTHO05D009606 3.3e-06 57.4 149 25.5
SMO174G0122 Selaginella moellendorffii HOM05D002157 ORTHO05D002197 4.3e-06 57.0 182 25.8
Ah.08g215690 Amaranthus hybridus HOM05D002157 ORTHO05D002197 5.6e-06 56.6 173 26.0
Duzib168G1155 Durio zibethinus HOM05D002157 ORTHO05D002197 5.6e-06 56.6 202 25.2
Duzib235G1428 Durio zibethinus HOM05D007618 ORTHO05D009606 5.6e-06 56.6 158 25.3
SalBow1G1919 Salvia bowleyana HOM05D007618 ORTHO05D009606 5.6e-06 56.6 154 24.7
Ah.04g151430 Amaranthus hybridus HOM05D002157 ORTHO05D002197 7.3e-06 56.2 166 24.7
COL.COLO4_26755 Corchorus olitorius HOM05D007618 ORTHO05D009606 7.3e-06 56.2 149 25.5
Atru.chr2.3415 Acer truncatum HOM05D000059 ORTHO05D000128 9.5e-06 55.8 63 42.9
MSTRG.19948 Avicennia marina HOM05D007618 ORTHO05D009606 9.5e-06 55.8 147 25.2
Cc05_g13650 Coffea canephora HOM05D000059 ORTHO05D000128 9.5e-06 55.8 62 41.9
Medtr4g132070 Medicago truncatula HOM05D000059 ORTHO05D000128 9.5e-06 55.8 63 41.3
Oeu042939.1 Olea europaea HOM05D000059 ORTHO05D000128 9.5e-06 55.8 62 41.9
Sed0001230 Sechium edule HOM05D000059 ORTHO05D000128 9.5e-06 55.8 61 44.3
Solyc01g112170.3 Solanum lycopersicum HOM05D007618 ORTHO05D009606 9.5e-06 55.8 149 24.8
Sopen01g054220 Solanum pennellii HOM05D007618 ORTHO05D009606 9.5e-06 55.8 149 24.8
Thecc.06G045200 Theobroma cacao HOM05D007618 ORTHO05D009606 9.5e-06 55.8 149 25.5
TPR.G37033 Trifolium pratense HOM05D000059 ORTHO05D000128 9.5e-06 55.8 63 41.3
TWI79G1181 Tripterygium wilfordii HOM05D002157 ORTHO05D002197 9.5e-06 55.8 225 24.4


User provided reference genes

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