Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 0.0e+00 1406.0 713 100.0
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 3.6e-87 327.0 534 37.5
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 2.3e-86 324.3 491 39.3
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 1.5e-85 321.6 509 38.7
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 4.4e-85 320.1 744 31.7
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 7.4e-85 319.3 470 41.1
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 7.4e-85 319.3 713 32.7
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 3.7e-84 317.0 571 35.6
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 8.2e-84 315.8 570 35.6
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 8.2e-84 315.8 664 34.8
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.1e-83 315.5 492 37.6
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 2.4e-83 314.3 573 35.4
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 4.1e-83 313.5 483 37.5
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 4.1e-83 313.5 460 40.2
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 5.3e-83 313.2 492 38.4
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 1.2e-82 312.0 505 37.8
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 1.5e-82 311.6 759 31.9
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 2.0e-82 311.2 565 35.2
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 2.6e-82 310.8 493 38.5
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 4.5e-82 310.1 447 39.4
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 7.7e-82 309.3 492 37.8
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 1.0e-81 308.9 743 31.0
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 2.2e-81 307.8 482 37.6
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 2.2e-81 307.8 631 33.1
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 2.2e-81 307.8 585 35.2
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 6.5e-81 306.2 463 38.7
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 8.5e-81 305.8 476 37.4
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.1e-80 305.4 496 37.7
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 1.4e-80 305.1 731 31.6
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.9e-80 304.7 494 36.4
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 1.9e-80 304.7 490 38.0
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 4.2e-80 303.5 478 37.4
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 5.5e-80 303.1 772 31.6
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 5.5e-80 303.1 719 33.0
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 5.5e-80 303.1 560 34.5
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 5.5e-80 303.1 463 38.7
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 9.4e-80 302.4 498 36.3
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 9.4e-80 302.4 490 37.1
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 9.4e-80 302.4 504 36.7
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 9.4e-80 302.4 473 37.2
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 1.2e-79 302.0 490 36.9
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 1.6e-79 301.6 461 39.0
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 2.1e-79 301.2 726 30.7
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 2.1e-79 301.2 768 30.9
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 1.0e-78 298.9 718 31.5
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.9e-78 297.0 729 31.6
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.9e-78 297.0 795 30.8
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 5.2e-78 296.6 468 40.2
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 8.8e-78 295.8 499 36.7
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 8.8e-78 295.8 491 35.8
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 1.5e-77 295.0 756 31.5
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 2.6e-77 294.3 662 32.3
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 2.6e-77 294.3 721 30.5
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.6e-77 294.3 531 35.6
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 3.3e-77 293.9 731 32.1
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 3.3e-77 293.9 638 33.2
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 4.4e-77 293.5 658 33.1
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 5.7e-77 293.1 739 31.4
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 7.4e-77 292.7 724 32.3
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 9.7e-77 292.4 492 36.4
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 2.2e-76 291.2 491 36.3
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 2.8e-76 290.8 782 30.3
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 3.7e-76 290.4 638 32.6
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 4.8e-76 290.0 646 32.7
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 8.2e-76 289.3 602 33.2
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 1.1e-75 288.9 646 32.7
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 1.8e-75 288.1 477 37.1
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 1.8e-75 288.1 668 32.5
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 2.4e-75 287.7 731 32.0
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 3.1e-75 287.3 440 40.7
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 5.3e-75 286.6 645 32.6
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 7.0e-75 286.2 652 32.7
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 5.9e-74 283.1 445 38.2
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 1.0e-73 282.3 468 36.8
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 1.3e-73 282.0 437 37.5
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.3e-73 282.0 588 33.7
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 2.2e-73 281.2 746 30.7
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 2.5e-72 277.7 672 32.6
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 3.2e-72 277.3 420 38.3
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 4.2e-72 276.9 524 35.3
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 7.2e-72 276.2 699 30.9
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 1.2e-69 268.9 750 29.9
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.2e-69 268.9 579 33.0
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.6e-69 267.7 585 32.6
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 4.4e-69 266.9 675 31.9
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 7.5e-69 266.2 405 38.8
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 4.1e-67 260.4 339 40.7
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 8.5e-65 252.7 350 39.7
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 1.5e-64 251.9 390 39.2
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 5.7e-61 240.0 465 35.9
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 2.2e-60 238.0 534 32.0
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 3.7e-60 237.3 640 29.4
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.1e-59 233.8 324 38.9
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 1.2e-58 232.3 473 33.4
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 3.5e-58 230.7 705 29.2
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 7.2e-56 223.0 484 32.6
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 8.0e-55 219.5 429 31.9
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 1.2e-53 215.7 306 39.9
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 2.0e-53 214.9 284 39.8
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.6e-53 214.5 315 40.0
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 5.7e-53 213.4 640 28.9
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 9.8e-53 212.6 716 28.6
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.8e-52 211.1 311 37.0
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 4.9e-52 210.3 491 30.1
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 2.0e-50 204.9 813 26.8
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 8.6e-49 199.5 609 28.2
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 1.1e-48 199.1 391 35.0
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 1.8e-46 191.8 308 37.3
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 1.2e-45 189.1 340 35.0
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 4.4e-45 187.2 577 30.2
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.4e-43 181.4 314 35.0
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.9e-36 157.9 541 29.0
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 1.9e-35 155.2 276 37.3
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.2e-35 154.5 495 28.7
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 5.8e-29 133.7 232 36.2
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 4.6e-26 124.0 246 34.1
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 1.0e-25 122.9 188 41.5
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.5e-24 119.0 192 39.1
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 5.2e-22 110.5 199 35.2
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 6.8e-22 110.2 147 38.1
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.6e-21 108.2 137 40.9
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 4.1e-19 100.9 178 33.1
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 2.7e-18 98.2 143 37.1
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.7e-18 98.2 440 26.4
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 3.5e-18 97.8 140 40.7
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 5.6e-16 90.5 138 35.5
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.2e-15 89.4 84 44.0
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 1.8e-14 85.5 272 23.2
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 4.0e-14 84.3 245 29.4
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 1.2e-13 82.8 332 28.3
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 1.9e-11 75.5 317 27.4
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 3.2e-11 74.7 119 36.1
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.6e-10 70.9 511 23.9
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.0e-09 68.2 89 36.0
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 6.6e-09 67.0 85 37.6
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 8.7e-09 66.6 47 59.6
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.1e-08 66.2 47 57.4
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 4.8e-07 60.8 92 38.0
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 3.1e-06 58.2 76 40.8
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 9.0e-06 56.6 81 42.0


User provided reference genes

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