Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 0.0e+00 1263.1 717 100.0
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 6.4e-28 130.2 363 30.0
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 7.1e-27 126.7 361 30.5
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.2e-26 125.9 377 31.3
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 4.6e-26 124.0 359 30.1
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 1.0e-25 122.9 369 29.8
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 3.0e-25 121.3 366 29.2
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 5.1e-25 120.6 363 30.3
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 8.7e-25 119.8 362 29.8
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 1.1e-24 119.4 348 30.2
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.5e-24 119.0 358 27.9
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 5.6e-24 117.1 359 29.2
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 7.3e-24 116.7 365 28.2
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 7.3e-24 116.7 357 29.4
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 9.6e-24 116.3 370 28.4
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 1.6e-23 115.5 228 32.9
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.6e-23 115.5 344 28.5
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 1.6e-23 115.5 360 29.4
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 3.6e-23 114.4 354 29.4
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 4.8e-23 114.0 338 27.8
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 6.2e-23 113.6 360 29.7
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 6.2e-23 113.6 357 29.7
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 8.1e-23 113.2 356 29.8
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 1.1e-22 112.8 360 28.6
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 1.1e-22 112.8 363 27.3
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 1.1e-22 112.8 360 28.9
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 1.4e-22 112.5 202 33.7
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 1.4e-22 112.5 370 28.9
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 1.4e-22 112.5 359 28.1
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 1.8e-22 112.1 242 31.0
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 2.4e-22 111.7 335 27.8
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 2.4e-22 111.7 356 28.7
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 2.4e-22 111.7 358 30.2
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 3.1e-22 111.3 359 27.6
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 3.1e-22 111.3 369 27.6
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 3.1e-22 111.3 359 27.6
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 4.0e-22 110.9 360 28.1
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 4.0e-22 110.9 363 29.2
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 5.3e-22 110.5 336 27.7
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 5.3e-22 110.5 357 29.7
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.3e-22 110.5 357 29.7
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 5.3e-22 110.5 202 33.2
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 5.3e-22 110.5 356 28.1
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 6.9e-22 110.2 364 27.7
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 9.0e-22 109.8 359 27.3
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 9.0e-22 109.8 360 27.8
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 9.0e-22 109.8 335 27.2
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 9.0e-22 109.8 335 27.2
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.2e-21 109.4 357 29.4
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 1.2e-21 109.4 369 29.3
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 1.5e-21 109.0 367 27.5
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 1.5e-21 109.0 359 27.3
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 2.0e-21 108.6 360 28.9
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 2.6e-21 108.2 359 27.0
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 2.6e-21 108.2 281 29.2
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 2.6e-21 108.2 360 28.3
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 2.6e-21 108.2 359 27.9
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 2.6e-21 108.2 359 27.9
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 3.4e-21 107.8 365 27.7
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 3.4e-21 107.8 363 27.8
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 4.5e-21 107.5 335 26.9
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 4.5e-21 107.5 360 27.8
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 4.5e-21 107.5 365 28.5
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 5.8e-21 107.1 366 27.9
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 5.8e-21 107.1 366 27.9
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 5.8e-21 107.1 202 33.2
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 5.8e-21 107.1 357 28.9
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 5.8e-21 107.1 360 28.1
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 7.6e-21 106.7 202 32.2
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 7.6e-21 106.7 367 29.4
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 9.9e-21 106.3 202 32.2
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 1.3e-20 105.9 367 27.5
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 1.7e-20 105.5 335 26.3
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 1.7e-20 105.5 358 27.9
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 1.7e-20 105.5 367 26.7
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 2.2e-20 105.1 359 28.4
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 2.2e-20 105.1 363 27.3
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 2.9e-20 104.8 202 32.7
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 3.8e-20 104.4 360 28.6
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 4.9e-20 104.0 367 27.8
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 1.1e-19 102.8 360 26.7
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 1.1e-19 102.8 362 27.3
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 2.4e-19 101.7 374 27.5
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 5.5e-19 100.5 405 28.1
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 5.5e-19 100.5 387 26.6
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 7.1e-19 100.1 228 32.0
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 2.7e-18 98.2 368 26.9
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 4.6e-18 97.4 335 27.5
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.8e-17 95.5 380 26.6
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 2.3e-17 95.1 337 29.4
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 5.1e-17 94.0 364 26.4
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 6.7e-17 93.6 336 26.8
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 2.5e-16 91.7 362 26.2
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 2.5e-16 91.7 401 25.2
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 5.6e-16 90.5 379 25.6
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 7.4e-16 90.1 193 32.1
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 2.1e-15 88.6 357 26.9
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 3.7e-15 87.8 338 25.1
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 3.7e-15 87.8 240 27.5
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 6.2e-15 87.0 335 25.4
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 6.2e-15 87.0 359 24.5
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 2.4e-14 85.1 337 28.2
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 2.6e-13 81.6 344 23.5
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 3.4e-13 81.3 359 27.0
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 1.7e-12 79.0 302 27.2
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 1.7e-12 79.0 246 25.6
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 2.2e-12 78.6 226 33.2
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 6.5e-12 77.0 337 26.4
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.1e-11 76.3 364 24.7
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.2e-11 74.7 367 24.8
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 4.2e-11 74.3 232 31.9
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 2.1e-10 72.0 154 30.5
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 1.3e-09 69.3 145 31.0
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 1.8e-09 68.9 221 29.9
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 9.6e-08 63.2 79 38.0
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.8e-07 61.6 92 37.0
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 9.0e-06 56.6 199 29.6


User provided reference genes

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