Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.6e-109 399.4 198 100.0
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.0e-68 263.8 132 95.5
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 2.8e-66 255.8 131 92.4
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 1.5e-64 250.0 132 87.1
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 4.5e-64 248.4 132 88.6
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.0e-63 247.3 132 85.6
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 1.3e-63 246.9 132 87.9
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 1.7e-63 246.5 132 87.9
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.9e-63 245.7 132 85.6
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 4.9e-63 245.0 132 85.6
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 4.9e-63 245.0 132 85.6
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 7.1e-62 241.1 132 85.6
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 9.3e-62 240.7 132 85.6
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 1.6e-61 240.0 132 84.8
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 4.6e-61 238.4 132 86.4
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 1.0e-60 237.3 132 83.3
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 1.8e-60 236.5 132 82.6
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 6.7e-60 234.6 132 84.1
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 1.1e-59 233.8 132 81.8
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 1.5e-59 233.4 128 85.2
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 1.9e-59 233.0 132 83.3
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 9.6e-59 230.7 132 82.6
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 1.3e-58 230.3 128 84.4
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 1.3e-58 230.3 132 83.3
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 1.3e-58 230.3 132 81.8
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 1.6e-58 229.9 118 96.6
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 2.8e-58 229.2 132 81.1
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 3.7e-58 228.8 129 82.9
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 4.8e-58 228.4 141 78.0
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 4.8e-58 228.4 133 82.0
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 4.8e-58 228.4 133 82.7
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 1.4e-57 226.9 132 81.8
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 1.8e-57 226.5 132 81.1
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 3.1e-57 225.7 132 80.3
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 4.1e-57 225.3 132 80.3
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 4.1e-57 225.3 132 80.3
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 6.9e-57 224.6 132 78.8
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 9.0e-57 224.2 132 79.5
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 1.2e-56 223.8 132 78.8
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 1.2e-56 223.8 132 77.3
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 1.5e-56 223.4 135 77.0
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 1.5e-56 223.4 132 77.3
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 1.5e-56 223.4 133 82.7
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 3.4e-56 222.2 132 78.0
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 1.0e-55 220.7 132 78.0
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 1.7e-55 219.9 132 76.5
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 1.1e-54 217.2 132 79.5
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 1.1e-54 217.2 132 76.5
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 1.1e-54 217.2 132 75.8
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 1.4e-54 216.9 132 75.0
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 4.2e-54 215.3 120 85.8
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 4.2e-54 215.3 163 66.3
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 5.5e-54 214.9 132 77.3
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 9.3e-54 214.2 132 78.8
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 1.2e-53 213.8 132 78.0
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 1.6e-53 213.4 132 77.3
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 1.6e-53 213.4 128 78.9
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.6e-53 213.4 126 77.0
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.6e-53 213.4 126 77.0
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 2.1e-53 213.0 132 76.5
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 2.1e-53 213.0 120 84.2
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 2.1e-53 213.0 132 75.8
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 2.7e-53 212.6 128 79.7
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 2.7e-53 212.6 168 66.1
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 2.7e-53 212.6 132 73.5
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 3.5e-53 212.2 132 75.0
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 4.6e-53 211.8 132 76.5
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 4.6e-53 211.8 132 78.0
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 6.1e-53 211.5 132 76.5
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 6.1e-53 211.5 134 74.6
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 7.9e-53 211.1 133 75.2
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 7.9e-53 211.1 202 58.4
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 7.9e-53 211.1 133 75.9
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 1.0e-52 210.7 133 74.4
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 1.0e-52 210.7 132 79.5
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 1.3e-52 210.3 133 73.7
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 1.8e-52 209.9 132 72.7
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 1.8e-52 209.9 127 78.0
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 3.0e-52 209.1 131 74.0
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 3.9e-52 208.8 120 81.7
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 3.9e-52 208.8 120 81.7
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 3.9e-52 208.8 120 81.7
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 3.9e-52 208.8 154 66.9
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 6.7e-52 208.0 132 75.0
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 8.7e-52 207.6 120 80.8
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 1.1e-51 207.2 132 73.5
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 3.3e-51 205.7 120 80.8
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 3.3e-51 205.7 120 80.8
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 4.3e-51 205.3 132 74.2
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 9.7e-51 204.1 120 80.0
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 8.2e-50 201.1 132 73.5
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 1.1e-49 200.7 133 74.4
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 1.8e-49 199.9 133 74.4
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 1.8e-49 199.9 133 73.7
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 3.1e-49 199.1 133 73.7
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 6.9e-49 198.0 133 72.2
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 6.9e-49 198.0 133 72.2
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 9.0e-49 197.6 134 71.6
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 1.2e-48 197.2 134 72.4
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 1.2e-48 197.2 133 73.7
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 2.0e-48 196.4 119 74.8
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 2.6e-48 196.1 134 70.9
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 4.5e-48 195.3 133 72.9
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 5.9e-48 194.9 105 84.8
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 1.1e-46 190.7 104 81.7
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 6.1e-45 184.9 141 62.4
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 1.8e-44 183.3 190 52.1
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 6.7e-44 181.4 142 66.2
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 6.7e-44 181.4 95 89.5
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 8.8e-44 181.0 132 65.9
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 2.0e-43 179.9 132 65.9
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 1.7e-42 176.8 124 66.1
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 3.1e-41 172.6 120 67.5
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 3.8e-39 165.6 120 65.8
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 8.5e-39 164.5 175 52.6
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 1.1e-38 164.1 83 94.0
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 2.7e-37 159.5 92 78.3
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 2.2e-34 149.8 132 54.5
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 7.0e-33 144.8 92 76.1
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 5.0e-31 138.7 84 76.2
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 6.5e-31 138.3 113 55.8
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 1.9e-30 136.7 109 55.0
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 1.2e-29 134.0 178 41.0
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 1.4e-28 130.6 111 55.9
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 3.3e-27 125.9 112 59.8
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 4.0e-20 102.4 62 82.3
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.2e-19 100.9 53 83.0
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 2.3e-12 76.6 74 47.3
Cfa008170 Carpinus fangiana HOM05D004567 ORTHO05D124509 2.9e-07 59.7 41 80.5


User provided reference genes

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