Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 0.0e+00 1087.4 539 100.0
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 5.6e-295 1016.9 525 96.6
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 1.4e-248 862.8 583 75.6
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 2.9e-243 845.1 546 75.8
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 3.8e-243 844.7 549 75.2
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 3.6e-241 838.2 549 74.7
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.8e-240 835.9 549 74.7
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 3.0e-240 835.1 543 74.6
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 8.9e-240 833.6 493 83.6
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 1.2e-239 833.2 547 74.6
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 4.5e-236 821.2 558 73.8
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 1.5e-234 816.2 548 73.4
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 1.6e-233 812.8 542 73.6
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 6.1e-233 810.8 561 70.9
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 5.8e-231 804.3 544 73.3
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 1.7e-230 802.7 551 72.4
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 2.2e-230 802.4 528 75.4
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 1.1e-229 800.0 528 74.8
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 1.8e-229 799.3 545 73.2
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 9.5e-226 786.9 543 71.5
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 2.1e-225 785.8 528 73.7
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 1.8e-224 782.7 551 70.2
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 3.1e-224 781.9 532 72.7
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 4.0e-224 781.6 541 73.0
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 1.2e-223 780.0 527 72.5
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.0e-223 779.2 532 72.4
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 5.8e-223 777.7 532 72.6
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 9.8e-223 776.9 527 72.3
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 3.7e-222 775.0 532 72.6
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 8.3e-222 773.9 554 69.0
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 1.4e-221 773.1 528 72.7
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 1.9e-221 772.7 543 71.1
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 5.4e-221 771.2 543 69.6
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 1.6e-220 769.6 544 70.8
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 2.1e-220 769.2 547 68.6
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 1.5e-218 763.1 539 71.2
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.5e-218 762.3 545 69.2
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 2.1e-217 759.2 550 68.4
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 6.2e-217 757.7 547 69.1
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 8.1e-217 757.3 555 68.5
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 2.3e-216 755.7 547 68.7
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 5.2e-216 754.6 549 68.9
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 2.0e-215 752.7 543 69.4
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 3.4e-215 751.9 548 69.3
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 9.9e-215 750.4 551 68.6
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 1.7e-214 749.6 543 68.1
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 2.9e-214 748.8 551 68.4
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 1.1e-213 746.9 549 67.9
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 7.3e-210 734.2 504 72.8
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 4.7e-209 731.5 539 67.3
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 3.8e-206 721.8 535 66.4
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 8.4e-206 720.7 556 65.6
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 1.9e-205 719.5 553 66.4
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 3.2e-205 718.8 523 65.8
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 7.1e-205 717.6 536 65.9
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 2.5e-202 709.1 546 66.8
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 2.1e-201 706.1 540 65.7
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 4.7e-201 704.9 546 66.7
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 5.2e-200 701.4 559 64.9
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 6.9e-200 701.0 561 64.9
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 3.4e-199 698.7 514 65.6
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 1.7e-198 696.4 539 64.6
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 6.4e-198 694.5 545 64.8
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 1.1e-197 693.7 565 62.5
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 1.4e-197 693.3 548 63.5
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 7.1e-197 691.0 551 65.0
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 1.2e-196 690.3 544 64.0
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 1.6e-196 689.9 550 62.7
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 3.9e-195 685.3 530 66.2
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 6.9e-192 674.5 691 54.0
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 9.0e-192 674.1 580 59.5
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 4.5e-191 671.8 546 63.0
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 1.7e-190 669.8 547 62.2
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 8.4e-190 667.5 546 62.1
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 8.4e-190 667.5 548 62.8
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 3.2e-189 665.6 533 61.9
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 3.5e-188 662.1 552 65.8
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 7.9e-188 661.0 546 61.7
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 2.3e-187 659.4 548 62.6
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 2.5e-186 656.0 540 60.9
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 1.3e-185 653.7 571 59.4
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 2.0e-183 646.4 547 59.8
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 9.3e-181 637.5 550 60.9
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 1.3e-179 633.6 548 60.0
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 1.3e-179 633.6 544 58.8
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 6.7e-179 631.3 549 59.4
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 7.4e-178 627.9 548 59.9
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 1.3e-177 627.1 556 56.1
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 6.2e-177 624.8 475 64.0
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 1.8e-176 623.2 548 59.7
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 2.4e-176 622.9 549 58.7
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 7.6e-175 617.8 548 59.3
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 2.2e-174 616.3 548 58.9
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 1.4e-173 613.6 593 55.5
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 1.2e-172 610.5 546 59.0
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 2.7e-172 609.4 557 58.3
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 2.7e-172 609.4 538 58.4
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 1.5e-170 603.6 550 57.5
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 8.2e-169 597.8 414 69.6
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 1.3e-166 590.5 447 63.8
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 5.7e-162 575.1 698 49.6
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 8.5e-158 561.2 542 54.4
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.9e-157 560.1 494 57.9
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 2.0e-154 550.1 557 53.9
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 3.8e-150 535.8 480 58.3
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 3.3e-146 522.7 340 75.0
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 1.0e-139 501.1 375 66.4
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 8.8e-139 498.0 391 65.0
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 2.7e-127 459.9 324 69.8
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 3.0e-123 446.4 340 66.5
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 9.8e-122 441.4 313 70.3
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 1.6e-108 397.5 334 64.7
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 2.3e-107 393.7 377 56.5
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 6.4e-105 385.6 337 61.4
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 6.0e-103 379.0 387 51.2
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 3.0e-102 376.7 525 40.0
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 5.2e-99 365.9 534 40.1
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 1.3e-97 361.3 364 55.2
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 9.2e-96 355.1 545 39.8
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.3e-94 350.5 520 38.8
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 9.6e-93 345.1 534 36.7
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 9.3e-88 328.6 348 52.6
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 2.8e-68 263.8 132 95.5
Nitab4.5_0004158g0020 Nicotiana tabacum HOM05D004567 ORTHO05D005726 2.4e-67 260.8 199 59.8
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 1.7e-65 254.6 148 81.8
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 3.3e-61 240.4 134 82.8
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 8.2e-60 235.7 168 70.2
PGSC0003DMG402027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 4.0e-59 233.4 184 57.1
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 1.0e-57 228.8 151 70.9
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 5.7e-53 213.0 140 70.0
Oeu029994.1 Olea europaea HOM05D004567 ORTHO05D005726 6.9e-51 206.1 204 52.9
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 2.5e-48 197.6 104 83.7
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 2.9e-41 174.1 578 26.5
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.8e-36 157.5 157 55.4
ClCG10G008350 Citrullus lanatus HOM05D004567 ORTHO05D005726 4.8e-36 156.8 124 62.9
Rhsim04G0129600 Rhododendron simsii HOM05D004567 ORTHO05D005726 4.4e-29 133.7 99 64.6
Sed0015165 Sechium edule HOM05D004567 ORTHO05D005726 1.4e-27 128.6 126 53.2
unitig_578.g16281 Utricularia gibba HOM05D004567 ORTHO05D005726 9.1e-27 125.9 132 46.2
Cpa.g.sc0.162 Carica papaya HOM05D004567 ORTHO05D005726 2.0e-26 124.8 104 61.5
FAN11G1323 Fragaria x ananassa HOM05D004567 ORTHO05D005726 8.5e-25 119.4 100 60.0
Rhsim06G0125600 Rhododendron simsii HOM05D004567 ORTHO05D005726 5.2e-22 110.2 83 63.9
SHI31088 Sapria himalayana HOM05D004567 ORTHO05D005726 5.2e-22 110.2 100 57.0
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.7e-20 105.1 53 86.8
Actinidia24396 Actinidia chinensis HOM05D004567 ORTHO05D005726 4.5e-18 97.1 100 52.0
QL01p003984 Quercus lobata HOM05D004567 ORTHO05D000318 1.7e-17 95.1 76 61.8
Sed0023875 Sechium edule HOM05D004567 ORTHO05D005726 1.4e-14 85.5 73 56.2
TAR623G0420 Trochodendron aralioides HOM05D004567 ORTHO05D037809 6.8e-14 83.2 159 39.0
Rhsim04G0129400 Rhododendron simsii HOM05D004567 ORTHO05D005726 9.8e-13 79.3 86 50.0
SEGI_26710 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 2.8e-12 77.8 101 39.6
FvH4_7g08791 Fragaria vesca HOM05D004567 ORTHO05D045614 8.0e-07 59.7 44 70.5
FAN10G2073 Fragaria x ananassa HOM05D004567 ORTHO05D045614 5.2e-06 57.0 44 70.5
SEGI_29421 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 8.9e-06 56.2 76 32.9


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