Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021806 Carpinus fangiana HOM05D000173 ORTHO05D123071 2.8e-115 418.7 226 100.0
CsaV3_2G003040 Cucumis sativus L. HOM05D000173 ORTHO05D008065 2.6e-07 60.1 89 36.0
Carub.0004s2444 Capsella rubella HOM05D000173 ORTHO05D000316 3.4e-07 59.7 86 40.7
ClCG11G003220 Citrullus lanatus HOM05D000173 ORTHO05D008065 4.4e-07 59.3 89 36.0
Cpa.g.sc46.24 Carica papaya HOM05D000173 ORTHO05D008065 5.7e-07 58.9 89 36.0
Migut.N03220 Erythranthe guttata HOM05D000173 ORTHO05D004400 5.7e-07 58.9 86 38.4
Gohir.A07G036900 Gossypium hirsutum HOM05D000173 ORTHO05D008065 5.7e-07 58.9 89 37.1
Gohir.D07G041100 Gossypium hirsutum HOM05D000173 ORTHO05D008065 5.7e-07 58.9 89 37.1
SGA_v2.0_scaffold1819G54044 Striga asiatica HOM05D000173 ORTHO05D008065 5.7e-07 58.9 89 36.0
Aqoxy7G03664 Aquilegia oxysepala HOM05D000173 ORTHO05D008065 7.5e-07 58.5 89 36.0
CSS0043826 Camellia sinensis var. sinensis HOM05D000173 ORTHO05D008065 7.5e-07 58.5 89 36.0
PSO541G0700 Papaver somniferum HOM05D000173 ORTHO05D000316 9.8e-07 58.2 86 37.2
Rhsim01G0066700 Rhododendron simsii HOM05D000173 ORTHO05D008065 9.8e-07 58.2 89 36.0
PGSC0003DMG400036865 Solanum tuberosum HOM05D000173 ORTHO05D000316 9.8e-07 58.2 86 37.2
vmacro20579 Vaccinium macrocarpon HOM05D000173 ORTHO05D008065 9.8e-07 58.2 89 36.0
Actinidia21965 Actinidia chinensis HOM05D000173 ORTHO05D008065 1.3e-06 57.8 89 36.0
BcaC02g07264 Brassica carinata HOM05D000173 ORTHO05D000316 1.3e-06 57.8 86 38.4
Migut.J01219 Erythranthe guttata HOM05D000173 ORTHO05D008065 1.3e-06 57.8 89 34.8
Lj7A426T66 Lonicera japonica HOM05D000173 ORTHO05D008065 1.3e-06 57.8 89 36.0
Peaxi162Scf00765g00411 Petunia axillaris HOM05D000173 ORTHO05D008065 1.3e-06 57.8 86 37.2
Sabra18G0109100 Salix brachista HOM05D000173 ORTHO05D008065 1.3e-06 57.8 89 37.1
Sed0025274 Sechium edule HOM05D000173 ORTHO05D008065 1.3e-06 57.8 89 34.8
SEGI_35605 Sequoiadendron giganteum HOM05D000173 ORTHO05D000316 1.3e-06 57.8 86 38.4
Thecc.09G129900 Theobroma cacao HOM05D000173 ORTHO05D008065 1.3e-06 57.8 89 34.8
A04p32000 Brassica napus HOM05D000173 ORTHO05D000316 1.7e-06 57.4 87 40.2
BraA04t18657Z Brassica rapa HOM05D000173 ORTHO05D033136 1.7e-06 57.4 87 40.2
Gorai.001G043500 Gossypium raimondii HOM05D000173 ORTHO05D008065 1.7e-06 57.4 89 36.0
Potri.018G128300 Populus trichocarpa HOM05D000173 ORTHO05D008065 1.7e-06 57.4 89 36.0
SalBow6G5422 Salvia bowleyana HOM05D000173 ORTHO05D008065 1.7e-06 57.4 89 34.8
Zm00001eb092070 Zea mays HOM05D000173 ORTHO05D000316 1.7e-06 57.4 86 37.2
ECA234G2265 Erigeron canadensis HOM05D000173 ORTHO05D008065 2.2e-06 57.0 89 37.1
Nitab4.5_0000032g0130 Nicotiana tabacum HOM05D000173 ORTHO05D000316 2.2e-06 57.0 85 35.3
Atru.chr7.1116 Acer truncatum HOM05D000173 ORTHO05D008065 2.8e-06 56.6 87 35.6
ClCG09G013550 Citrullus lanatus HOM05D000173 ORTHO05D000316 2.8e-06 56.6 86 37.2
MELO3C018683.2 Cucumis melo HOM05D000173 ORTHO05D000316 2.8e-06 56.6 86 37.2
CsaV3_7G006090 Cucumis sativus L. HOM05D000173 ORTHO05D000316 2.8e-06 56.6 86 37.2
Mapoly0016s0139 Marchantia polymorpha HOM05D000173 ORTHO05D000316 2.8e-06 56.6 86 38.4
Mapoly0069s0083 Marchantia polymorpha HOM05D000173 ORTHO05D008065 2.8e-06 56.6 89 36.0
Sed0001784 Sechium edule HOM05D000173 ORTHO05D000316 2.8e-06 56.6 86 37.2
Sed0010223 Sechium edule HOM05D000173 ORTHO05D000316 2.8e-06 56.6 86 37.2
Hund17263 Selenicereus undatus HOM05D000173 ORTHO05D000316 2.8e-06 56.6 92 33.7
EL10Ac8g18700 Beta vulgaris HOM05D000173 ORTHO05D008065 3.7e-06 56.2 89 34.8
AUR62011163 Chenopodium quinoa HOM05D000173 ORTHO05D008065 3.7e-06 56.2 89 34.8
AUR62013322 Chenopodium quinoa HOM05D000173 ORTHO05D008065 3.7e-06 56.2 89 34.8
Gohir.A04G056700 Gossypium hirsutum HOM05D000173 ORTHO05D000316 3.7e-06 56.2 86 36.0
MD02G1028000 Malus domestica HOM05D000173 ORTHO05D008065 3.7e-06 56.2 101 32.7
Nitab4.5_0000032g0160 Nicotiana tabacum HOM05D000173 ORTHO05D000316 3.7e-06 56.2 86 37.2
Oeu012615.1 Olea europaea HOM05D000173 ORTHO05D008065 3.7e-06 56.2 89 34.8
Zm00001eb411820 Zea mays HOM05D000173 ORTHO05D008065 3.7e-06 56.2 89 34.8
CAN.G1013.25 Capsicum annuum HOM05D000173 ORTHO05D000316 4.9e-06 55.8 86 37.2
Mapoly0134s0041 Marchantia polymorpha HOM05D000173 ORTHO05D000316 4.9e-06 55.8 86 38.4
Peaxi162Scf00765g00133 Petunia axillaris HOM05D000173 ORTHO05D000316 4.9e-06 55.8 100 36.0
Sp4g24310 Schrenkiella parvula HOM05D000173 ORTHO05D000316 4.9e-06 55.8 86 40.7
HPP92_009313 Vanilla planifolia HOM05D000173 ORTHO05D000316 4.9e-06 55.8 86 37.2
HPP92_026206 Vanilla planifolia HOM05D000173 ORTHO05D000316 4.9e-06 55.8 86 37.2
HPP92_027181 Vanilla planifolia HOM05D000173 ORTHO05D000316 4.9e-06 55.8 86 37.2
AL4G40460 Arabidopsis lyrata HOM05D000173 ORTHO05D000316 6.3e-06 55.5 86 36.0
AL5G20780 Arabidopsis lyrata HOM05D000173 ORTHO05D008065 6.3e-06 55.5 89 34.8
CiPaw.03G247000 Carya illinoinensis HOM05D000173 ORTHO05D008065 6.3e-06 55.5 89 34.8
Lj1g0001923 Lotus japonicus HOM05D000173 ORTHO05D008065 6.3e-06 55.5 83 36.1
Nitab4.5_0000249g0400 Nicotiana tabacum HOM05D000173 ORTHO05D000316 6.3e-06 55.5 86 37.2
Os01g0269900 Oryza sativa ssp. japonica HOM05D000173 ORTHO05D008065 6.3e-06 55.5 89 36.0
Phvul.003G068000 Phaseolus vulgaris HOM05D000173 ORTHO05D008065 6.3e-06 55.5 89 34.8
Sc18g0000440 Simmondsia chinensis HOM05D000173 ORTHO05D008065 6.3e-06 55.5 89 32.6
Solyc04g071260.3 Solanum lycopersicum HOM05D000173 ORTHO05D000316 6.3e-06 55.5 86 37.2
Sopen04g027220 Solanum pennellii HOM05D000173 ORTHO05D000316 6.3e-06 55.5 86 37.2
AT3G33520 Arabidopsis thaliana HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 34.8
BcaB04g16923 Brassica carinata HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 36.0
BcaC09g50779 Brassica carinata HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
C01p20930 Brassica napus HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
BolC1t02020H Brassica oleracea HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
CANSAT11G2412 Cannabis sativa HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 36.0
Carub.0003s1145 Capsella rubella HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
CARHR153600 Cardamine hirsuta HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 34.8
CBR_g24113 Chara braunii HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 37.2
Ciclev10008344m.g Citrus clementina HOM05D000173 ORTHO05D008065 8.3e-06 55.1 87 36.8
Cc06_g08200 Coffea canephora HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 34.8
DCAR_017799 Daucus carota HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 34.8
Duzib205G1668 Durio zibethinus HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
Eucgr.C04260 Eucalyptus grandis HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 33.7
Glyma.04G071500 Glycine max HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 33.7
Gohir.A01G001300 Gossypium hirsutum HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
Gohir.D01G001000 Gossypium hirsutum HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
Gohir.D04G090100 Gossypium hirsutum HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
Gorai.002G001500 Gossypium raimondii HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
Gorai.010G062300 Gossypium raimondii HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 34.8
HanXRQChr14g0457921 Helianthus annuus HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
Lsat_1_v5_gn_5_107420 Lactuca sativa HOM05D000173 ORTHO05D000316 8.3e-06 55.1 88 36.4
Nitab4.5_0010582g0020 Nicotiana tabacum HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
PSO541G5420 Papaver somniferum HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
PSO675G4343 Papaver somniferum HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
Peaxi162Scf00152g01220 Petunia axillaris HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
Prupe.7G246800 Prunus persica HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 34.8
PGR042G1752 Punica granatum HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
SalBow4G3043 Salvia bowleyana HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 37.2
Solyc01g104770.4 Solanum lycopersicum HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
Sopen01g047290 Solanum pennellii HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
THA.LOC104815099 Tarenaya hassleriana HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 34.8
TAR636G3437 Trochodendron aralioides HOM05D000173 ORTHO05D008065 8.3e-06 55.1 89 33.7
unitig_26.g9065 Utricularia gibba HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
unitig_747.g21789 Utricularia gibba HOM05D000173 ORTHO05D000316 8.3e-06 55.1 93 35.5
unitig_749.g14156 Utricularia gibba HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
HPP92_002289 Vanilla planifolia HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0
Zm00001eb202400 Zea mays HOM05D000173 ORTHO05D000316 8.3e-06 55.1 86 36.0


User provided reference genes

Program Settings