Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021786 Carpinus fangiana HOM05D000412 ORTHO05D125898 2.8e-274 948.0 473 100.0
Cfa023146 Carpinus fangiana HOM05D000412 ORTHO05D002774 6.1e-35 152.9 328 31.1
EL10Ac7g18108 Beta vulgaris HOM05D000412 ORTHO05D002774 1.5e-17 95.1 214 29.4
Pp3c1_29810 Physcomitrium patens HOM05D000412 ORTHO05D002774 2.0e-17 94.7 226 30.5
Pp3c2_6560 Physcomitrium patens HOM05D000412 ORTHO05D002774 2.0e-17 94.7 226 30.1
AUR62025690 Chenopodium quinoa HOM05D000412 ORTHO05D002774 3.4e-17 94.0 236 28.8
Hma1.2p1_1111F.1_g258490 Hydrangea macrophylla HOM05D000412 ORTHO05D002774 1.7e-16 91.7 414 24.2
TAR636G0146 Trochodendron aralioides HOM05D000412 ORTHO05D002774 3.7e-16 90.5 278 27.0
Migut.I01213 Erythranthe guttata HOM05D000412 ORTHO05D002774 1.1e-15 89.0 308 26.9
Sed0007185 Sechium edule HOM05D000412 ORTHO05D002774 1.4e-15 88.6 255 29.4
TWI12G0919 Tripterygium wilfordii HOM05D000412 ORTHO05D002774 1.4e-15 88.6 263 28.5
Nn8g41257 Nelumbo nucifera HOM05D003623 ORTHO05D004335 2.4e-15 87.8 234 29.1
Sc12g0011280 Simmondsia chinensis HOM05D000412 ORTHO05D002774 4.1e-15 87.0 226 27.0
AagrBONN_evm.TU.Sc2ySwM_362.1463 Anthoceros agrestis HOM05D000412 ORTHO05D002774 7.0e-15 86.3 256 27.3
AagrBONN_evm.TU.Sc2ySwM_117.2973 Anthoceros agrestis HOM05D000412 ORTHO05D002774 1.2e-14 85.5 225 28.0
SGA_v2.0_scaffold122G33257 Striga asiatica HOM05D000412 ORTHO05D002774 1.6e-14 85.1 268 27.6
Cre07.g337850 Chlamydomonas reinhardtii HOM05D000412 ORTHO05D002774 2.0e-14 84.7 221 28.5
MD09G1168900 Malus domestica HOM05D000412 ORTHO05D002774 2.0e-14 84.7 214 29.0
Prupe.3G027200 Prunus persica HOM05D000412 ORTHO05D002774 2.7e-14 84.3 221 28.5
QL05p085494 Quercus lobata HOM05D000412 ORTHO05D002774 4.5e-14 83.6 221 28.1
Lj5C836T9 Lonicera japonica HOM05D000412 ORTHO05D002774 5.9e-14 83.2 256 27.7
MSTRG.22496 Avicennia marina HOM05D000412 ORTHO05D002774 1.0e-13 82.4 228 25.4
AUR62001308 Chenopodium quinoa HOM05D000412 ORTHO05D002774 1.0e-13 82.4 232 26.3
MD17G1157900 Malus domestica HOM05D000412 ORTHO05D002774 1.0e-13 82.4 214 29.4
Cc06_g23560 Coffea canephora HOM05D000412 ORTHO05D002774 1.7e-13 81.6 216 29.2
Medtr4g005090 Medicago truncatula HOM05D000412 ORTHO05D002774 1.7e-13 81.6 334 26.9
Psat7g264680 Pisum sativum HOM05D000412 ORTHO05D002774 3.9e-13 80.5 301 26.2
CANSAT01G2068 Cannabis sativa HOM05D000412 ORTHO05D002774 5.0e-13 80.1 224 28.1
CBR_g51099 Chara braunii HOM05D000412 ORTHO05D002774 5.0e-13 80.1 242 25.2
Ah.06g185560 Amaranthus hybridus HOM05D000412 ORTHO05D002774 6.6e-13 79.7 269 27.1
Ca_20975_v3 Cicer arietinum L. HOM05D000412 ORTHO05D002774 6.6e-13 79.7 215 29.8
SalBow6G6770 Salvia bowleyana HOM05D000412 ORTHO05D002774 6.6e-13 79.7 228 24.1
TPR.G38798 Trifolium pratense HOM05D000412 ORTHO05D002774 1.1e-12 79.0 215 29.3
Actinidia31120 Actinidia chinensis HOM05D000912 ORTHO05D001232 1.5e-12 78.6 226 27.4
arahy.Tifrunner.gnm1.ann1.4E0G5V Arachis hypogaea HOM05D000412 ORTHO05D002774 1.5e-12 78.6 231 27.3
arahy.Tifrunner.gnm1.ann1.PSV4UT Arachis hypogaea HOM05D000412 ORTHO05D002774 1.5e-12 78.6 231 27.3
Ah.04g164160 Amaranthus hybridus HOM05D000349 ORTHO05D002774 3.3e-12 77.4 219 27.9
AUR62019600 Chenopodium quinoa HOM05D000412 ORTHO05D002774 4.3e-12 77.0 215 26.0
Lj3g0014468 Lotus japonicus HOM05D000412 ORTHO05D002774 4.3e-12 77.0 248 28.2
Pp3c12_1850 Physcomitrium patens HOM05D000412 ORTHO05D002774 5.6e-12 76.6 223 26.0
EL10Ac4g08379 Beta vulgaris HOM05D000412 ORTHO05D002774 7.3e-12 76.3 225 26.2
CSS0002816 Camellia sinensis var. sinensis HOM05D000412 ORTHO05D002774 7.3e-12 76.3 290 24.8
Duzib192G0205 Durio zibethinus HOM05D000412 ORTHO05D002774 1.2e-11 75.5 236 25.4
Peaxi162Scf00474g00008 Petunia axillaris HOM05D000412 ORTHO05D002774 1.6e-11 75.1 221 27.6
MSTRG.5972 Avicennia marina HOM05D000412 ORTHO05D002774 2.1e-11 74.7 222 26.6
Glyma.08G226400 Glycine max HOM05D000412 ORTHO05D002774 2.1e-11 74.7 219 29.2
Glyma.07G000800 Glycine max HOM05D000412 ORTHO05D002774 2.8e-11 74.3 219 27.4
AUR62037575 Chenopodium quinoa HOM05D000412 ORTHO05D002774 3.6e-11 73.9 225 27.1
AUR62019601 Chenopodium quinoa HOM05D000412 ORTHO05D002774 4.7e-11 73.6 225 27.1
Lsat_1_v5_gn_7_57100 Lactuca sativa HOM05D000412 ORTHO05D002774 4.7e-11 73.6 407 24.6
Gohir.D08G091900 Gossypium hirsutum HOM05D000412 ORTHO05D002774 1.0e-10 72.4 220 23.6
Gorai.004G097400 Gossypium raimondii HOM05D000412 ORTHO05D002774 1.0e-10 72.4 220 23.6
Mapoly0084s0014 Marchantia polymorpha HOM05D000412 ORTHO05D002774 1.0e-10 72.4 219 26.9
QL11p006481 Quercus lobata HOM05D000412 ORTHO05D002774 1.0e-10 72.4 287 25.4
Zm00001eb222640 Zea mays HOM05D000412 ORTHO05D002774 1.0e-10 72.4 212 27.8
CAN.G1124.6 Capsicum annuum HOM05D000412 ORTHO05D002774 1.4e-10 72.0 256 26.2
ECA236G2327 Erigeron canadensis HOM05D000412 ORTHO05D002774 1.4e-10 72.0 226 25.2
Gohir.A08G082200 Gossypium hirsutum HOM05D000412 ORTHO05D002774 3.1e-10 70.9 220 25.9
Gohir.A08G082400 Gossypium hirsutum HOM05D000412 ORTHO05D002774 3.1e-10 70.9 220 23.6
Lj5C777T8 Lonicera japonica HOM05D000412 ORTHO05D002774 3.1e-10 70.9 392 23.7
MSTRG.5973 Avicennia marina HOM05D000412 ORTHO05D002774 5.2e-10 70.1 363 22.9
CBR_g24109 Chara braunii HOM05D000412 ORTHO05D002774 5.2e-10 70.1 225 28.0
MCO05G360 Micromonas commoda HOM05D000412 ORTHO05D002774 6.8e-10 69.7 230 26.5
MSTRG.19413 Avicennia marina HOM05D000412 ORTHO05D002774 1.2e-09 68.9 329 22.8
Nitab4.5_0000807g0140 Nicotiana tabacum HOM05D000412 ORTHO05D002774 2.6e-09 67.8 247 23.9
Manes.02G207900 Manihot esculenta HOM05D000412 ORTHO05D002774 4.4e-09 67.0 260 24.2
Lsat_1_v5_gn_8_69720 Lactuca sativa HOM05D000412 ORTHO05D002774 5.8e-09 66.6 299 26.1
DCAR_010675 Daucus carota HOM05D000412 ORTHO05D002774 7.5e-09 66.2 220 25.5
Cre02.g094200 Chlamydomonas reinhardtii HOM05D000412 ORTHO05D002774 9.8e-09 65.9 228 23.2
PGSC0003DMG400013562 Solanum tuberosum HOM05D000412 ORTHO05D002774 9.8e-09 65.9 262 24.4
Phvul.010G165500 Phaseolus vulgaris HOM05D000412 ORTHO05D002774 2.9e-08 64.3 221 30.3
TWI63G1520 Tripterygium wilfordii HOM05D000412 ORTHO05D002774 1.4e-07 62.0 221 24.9
COL.COLO4_08831 Corchorus olitorius HOM05D000412 ORTHO05D002774 2.4e-07 61.2 383 23.2
Rhsim08G0117300 Rhododendron simsii HOM05D000412 ORTHO05D002774 1.2e-06 58.9 391 22.3
Thhalv10022015m.g Eutrema salsugineum HOM05D000839 ORTHO05D000664 3.5e-06 57.4 221 27.1


User provided reference genes

Program Settings