Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021657 Carpinus fangiana HOM05D003212 ORTHO05D003959 1.4e-128 463.0 237 100.0
CBR_g41363 Chara braunii HOM05D003212 ORTHO05D003959 3.8e-09 66.2 148 30.4
AUR62026849 Chenopodium quinoa HOM05D003212 ORTHO05D003959 3.8e-09 66.2 196 27.0
AUR62037200 Chenopodium quinoa HOM05D003212 ORTHO05D003959 4.9e-09 65.9 196 27.0
EL10Ac2g02822 Beta vulgaris HOM05D003212 ORTHO05D003959 8.4e-09 65.1 219 25.1
Ah.12g062950 Amaranthus hybridus HOM05D003212 ORTHO05D003959 1.1e-08 64.7 196 25.0
Os01g0951200 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 3.2e-08 63.2 145 29.7
PRCOL_00000883 Prasinoderma coloniale HOM05D003212 ORTHO05D003959 4.2e-08 62.8 192 28.1
Carub.0005s2109 Capsella rubella HOM05D003212 ORTHO05D003959 5.4e-08 62.4 200 27.5
HanXRQChr01g0008251 Helianthus annuus HOM05D003212 ORTHO05D003959 5.4e-08 62.4 144 31.2
Sp5g07950 Schrenkiella parvula HOM05D003212 ORTHO05D003959 1.2e-07 61.2 200 26.5
Thhalv10010334m.g Eutrema salsugineum HOM05D003212 ORTHO05D003959 1.6e-07 60.8 200 26.5
Sc11g0006540 Simmondsia chinensis HOM05D003212 ORTHO05D003959 1.6e-07 60.8 219 26.0
AL5G35520 Arabidopsis lyrata HOM05D003212 ORTHO05D003959 2.1e-07 60.5 200 26.5
SMO259G0031 Selaginella moellendorffii HOM05D003212 ORTHO05D003959 2.1e-07 60.5 158 29.7
COL.COLO4_09453 Corchorus olitorius HOM05D003212 ORTHO05D003959 2.7e-07 60.1 196 27.6
Duzib268G1229 Durio zibethinus HOM05D003212 ORTHO05D003959 3.5e-07 59.7 196 27.0
Potri.003G198501 Populus trichocarpa HOM05D003212 ORTHO05D003959 3.5e-07 59.7 145 31.7
Potri.T125906 Populus trichocarpa HOM05D003212 ORTHO05D003959 3.5e-07 59.7 145 31.7
QL04p014524 Quercus lobata HOM05D003212 ORTHO05D003959 7.9e-07 58.5 162 27.8
QL04p014886 Quercus lobata HOM05D003212 ORTHO05D003959 7.9e-07 58.5 162 27.8
Duzib213G0398 Durio zibethinus HOM05D003212 ORTHO05D003959 1.0e-06 58.2 196 26.5
Gohir.A04G028000 Gossypium hirsutum HOM05D003212 ORTHO05D003959 1.7e-06 57.4 196 27.0
Gohir.A13G144600 Gossypium hirsutum HOM05D003212 ORTHO05D003959 1.7e-06 57.4 195 27.2
Sabra03G0147800 Salix brachista HOM05D003212 ORTHO05D003959 2.3e-06 57.0 144 29.2
Gorai.013G167000 Gossypium raimondii HOM05D003212 ORTHO05D003959 3.0e-06 56.6 192 27.1
Atru.chr12.1386 Acer truncatum HOM05D003212 ORTHO05D003959 5.1e-06 55.8 145 31.0
Cre01.g048950 Chlamydomonas reinhardtii HOM05D003212 ORTHO05D003959 5.1e-06 55.8 144 27.1
Gohir.D05G360100 Gossypium hirsutum HOM05D003212 ORTHO05D003959 5.1e-06 55.8 196 26.0
Aqoxy2G00340 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 6.6e-06 55.5 144 29.9
CDE08G1532 Ceratophyllum demersum HOM05D003212 ORTHO05D003959 6.6e-06 55.5 145 29.0
Haze_03071 Corylus avellana HOM05D003212 ORTHO05D003959 6.6e-06 55.5 201 25.9
SEGI_05174 Sequoiadendron giganteum HOM05D003212 ORTHO05D003959 6.6e-06 55.5 144 28.5
Thecc.07G075400 Theobroma cacao HOM05D003212 ORTHO05D003959 6.6e-06 55.5 196 26.0


User provided reference genes

Program Settings