Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021641 Carpinus fangiana HOM05D002065 ORTHO05D002050 1.6e-96 356.3 202 100.0
Cfa021640 Carpinus fangiana HOM05D002065 ORTHO05D002050 8.3e-50 201.1 184 60.3
CiPaw.09G086500 Carya illinoinensis HOM05D002065 ORTHO05D002050 1.0e-39 167.5 202 48.5
QL05p075311 Quercus lobata HOM05D002065 ORTHO05D002050 1.7e-34 150.2 210 44.8
CiPaw.10G067700 Carya illinoinensis HOM05D002065 ORTHO05D002050 5.4e-33 145.2 187 46.0
Haze_06727 Corylus avellana HOM05D004864 ORTHO05D005393 6.6e-31 138.3 239 40.2
Haze_06730 Corylus avellana HOM05D004864 ORTHO05D005393 6.6e-31 138.3 239 40.2
TAR626G1859 Trochodendron aralioides HOM05D002065 ORTHO05D002050 7.3e-30 134.8 175 42.3
TWI38G1606 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 9.0e-28 127.9 183 42.1
TWI38G1319 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 1.5e-27 127.1 186 40.9
Ciclev10017718m.g Citrus clementina HOM05D002065 ORTHO05D002050 6.4e-26 121.7 194 39.7
Hma1.2p1_0729F.1_g209600 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 4.6e-24 115.5 190 38.4
CSS0011499 Camellia sinensis var. sinensis HOM05D002065 ORTHO05D002050 2.3e-23 113.2 174 37.9
Nn1g03650 Nelumbo nucifera HOM05D002065 ORTHO05D002050 5.1e-23 112.1 174 36.8
Aqoxy4G02006 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 9.6e-22 107.8 183 36.1
MBI18_g40467_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 6.9e-20 101.7 181 32.6
Manes.17G029300 Manihot esculenta HOM05D002065 ORTHO05D002050 7.6e-19 98.2 190 30.5
Duzib192G0918 Durio zibethinus HOM05D002065 ORTHO05D002050 1.3e-18 97.4 175 33.1
Hma1.2p1_0729F.1_g209610 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 1.7e-18 97.1 175 32.6
TAR629G2849 Trochodendron aralioides HOM05D002065 ORTHO05D002050 2.2e-18 96.7 181 32.0
CiPaw.09G086400 Carya illinoinensis HOM05D002065 ORTHO05D002050 2.9e-18 96.3 198 30.3
MD10G1314100 Malus domestica HOM05D002065 ORTHO05D002050 3.8e-18 95.9 178 34.8
Thecc.06G213400 Theobroma cacao HOM05D002065 ORTHO05D002050 4.9e-18 95.5 179 30.2
Rhsim13G0158000 Rhododendron simsii HOM05D002065 ORTHO05D002050 6.5e-18 95.1 190 34.2
CiPaw.09G085400 Carya illinoinensis HOM05D002065 ORTHO05D002050 8.4e-18 94.7 198 30.8
MBI18_g06812_MAGBIO Magnolia biondii HOM05D004864 ORTHO05D002050 8.4e-18 94.7 171 32.2
Duzib235G0538 Durio zibethinus HOM05D002065 ORTHO05D002050 1.1e-17 94.4 181 29.3
ClCG03G005020 Citrullus lanatus HOM05D002065 ORTHO05D002050 7.1e-17 91.7 193 32.6
Nn1g07008 Nelumbo nucifera HOM05D002065 ORTHO05D002050 7.1e-17 91.7 172 31.4
Duzib235G0905 Durio zibethinus HOM05D002065 ORTHO05D002050 1.6e-16 90.5 202 29.2
Gorai.011G017400 Gossypium raimondii HOM05D002065 ORTHO05D002050 2.1e-16 90.1 181 30.4
Gohir.A10G015700 Gossypium hirsutum HOM05D002065 ORTHO05D002050 4.6e-16 89.0 180 30.6
QL05p075313 Quercus lobata HOM05D002065 ORTHO05D002050 4.6e-16 89.0 184 28.3
MD05G1340600 Malus domestica HOM05D002065 ORTHO05D002050 6.0e-16 88.6 178 32.6
PGSC0003DMG400002090 Solanum tuberosum HOM05D002065 ORTHO05D002050 6.0e-16 88.6 182 33.5
Gohir.D06G151332 Gossypium hirsutum HOM05D002065 ORTHO05D002050 1.3e-15 87.4 172 29.7
Gorai.010G176400 Gossypium raimondii HOM05D002065 ORTHO05D002050 1.3e-15 87.4 172 29.7
Gohir.A06G144950 Gossypium hirsutum HOM05D002065 ORTHO05D002050 1.8e-15 87.0 172 30.2
Oeu037342.1 Olea europaea HOM05D002065 ORTHO05D002050 3.0e-15 86.3 155 31.0
Sopen02g024810 Solanum pennellii HOM05D002065 ORTHO05D002050 8.7e-15 84.7 177 32.8
COL.COLO4_31720 Corchorus olitorius HOM05D004864 ORTHO05D005393 1.1e-14 84.3 171 31.0
Gohir.D10G015700 Gossypium hirsutum HOM05D002065 ORTHO05D002050 1.1e-14 84.3 181 29.3
Rhsim13G0158100 Rhododendron simsii HOM05D002065 ORTHO05D002050 1.9e-14 83.6 170 30.0
Oeu051228.1 Olea europaea HOM05D002065 ORTHO05D002050 2.5e-14 83.2 177 30.5
CSS0011359 Camellia sinensis var. sinensis HOM05D002065 ORTHO05D002050 3.3e-14 82.8 181 28.7
PGR004G0337 Punica granatum HOM05D002065 ORTHO05D002050 5.7e-14 82.0 200 27.5
TAR626G1743 Trochodendron aralioides HOM05D002065 ORTHO05D002050 5.7e-14 82.0 202 28.7
Prupe.4G027000 Prunus persica HOM05D002065 ORTHO05D002050 7.4e-14 81.6 179 31.3
ATR0794G125 Amborella trichopoda HOM05D002065 ORTHO05D002050 1.3e-13 80.9 175 30.3
FvH4_3g02720 Fragaria vesca HOM05D002065 ORTHO05D002050 2.1e-13 80.1 182 30.8
Potri.004G023400 Populus trichocarpa HOM05D002065 ORTHO05D002050 2.8e-13 79.7 181 29.8
ATR0794G057 Amborella trichopoda HOM05D002065 ORTHO05D002050 4.8e-13 79.0 173 29.5
PSO675G3505 Papaver somniferum HOM05D002065 ORTHO05D002050 6.2e-13 78.6 184 31.0
FAN25G0723 Fragaria x ananassa HOM05D002065 ORTHO05D002050 1.8e-12 77.0 181 28.7
FAN21G3944 Fragaria x ananassa HOM05D002065 ORTHO05D002050 5.3e-12 75.5 181 28.2
TWI38G0471 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 6.9e-12 75.1 182 26.4
Dinv18891 Davidia involucrata HOM05D002065 ORTHO05D002050 9.0e-12 74.7 169 27.8
TAR629G2752 Trochodendron aralioides HOM05D002065 ORTHO05D002050 9.0e-12 74.7 181 28.2
Aqoxy4G02007 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 2.0e-11 73.6 167 28.7
Gohir.A10G015750 Gossypium hirsutum HOM05D002065 ORTHO05D002050 2.0e-11 73.6 184 28.3
Gohir.D10G015750 Gossypium hirsutum HOM05D002065 ORTHO05D002050 2.0e-11 73.6 178 28.1
CSS0043809 Camellia sinensis var. sinensis HOM05D002065 ORTHO05D002050 3.4e-11 72.8 177 27.1
Gorai.011G017500 Gossypium raimondii HOM05D002065 ORTHO05D002050 3.4e-11 72.8 178 28.1
Dinv20008 Davidia involucrata HOM05D002065 ORTHO05D002050 5.8e-11 72.0 170 27.6
Nn1g03652 Nelumbo nucifera HOM05D002065 ORTHO05D002050 7.6e-11 71.6 186 29.6
Prupe.4G026900 Prunus persica HOM05D002065 ORTHO05D002050 1.3e-10 70.9 178 27.0
Actinidia26952 Actinidia chinensis HOM05D002065 ORTHO05D002050 1.7e-10 70.5 150 28.0
Oeu037345.1 Olea europaea HOM05D002065 ORTHO05D002050 1.7e-10 70.5 91 36.3
Sed0000521 Sechium edule HOM05D004864 ORTHO05D005393 1.7e-10 70.5 157 28.0
AUR62022020 Chenopodium quinoa HOM05D000128 ORTHO05D000059 2.9e-10 69.7 166 29.5
Cpa.g.sc81.25 Carica papaya HOM05D002065 ORTHO05D002050 3.8e-10 69.3 178 26.4
Lsat_1_v5_gn_7_16941 Lactuca sativa HOM05D002065 ORTHO05D002050 3.8e-10 69.3 178 30.3
AUR62012636 Chenopodium quinoa HOM05D002065 ORTHO05D002050 1.9e-09 67.0 167 27.5
Ciclev10016810m.g Citrus clementina HOM05D002065 ORTHO05D002050 2.5e-09 66.6 175 27.4
Sabra04G0012800 Salix brachista HOM05D004864 ORTHO05D005393 3.2e-09 66.2 171 28.7
Actinidia05537 Actinidia chinensis HOM05D002065 ORTHO05D002050 7.1e-09 65.1 146 26.0
VMungo1215G2268 Vigna mungo HOM05D002065 ORTHO05D002050 1.2e-08 64.3 175 25.1
CsaV3_1G011100 Cucumis sativus L. HOM05D060685 ORTHO05D002050 1.6e-08 63.9 174 27.0
Lsat_1_v5_gn_3_120800 Lactuca sativa HOM05D002065 ORTHO05D002050 1.6e-08 63.9 94 37.2
PSO017G0621 Papaver somniferum HOM05D002065 ORTHO05D002050 1.6e-08 63.9 189 22.2
SGA_v2.0_scaffold7G03888 Striga asiatica HOM05D002065 ORTHO05D002050 1.6e-08 63.9 107 37.4
TWI38G2287 Tripterygium wilfordii HOM05D004864 ORTHO05D005393 6.1e-08 62.0 174 24.7
RhsimUnG0253100 Rhododendron simsii HOM05D002065 ORTHO05D002050 1.0e-07 61.2 199 25.1
Lsat_1_v5_gn_5_5781 Lactuca sativa HOM05D002065 ORTHO05D002050 1.3e-07 60.8 88 37.5
MBI18_g44237_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 2.3e-07 60.1 175 28.6
MBI18_g44238_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 3.0e-07 59.7 168 28.6
Nn1g07007 Nelumbo nucifera HOM05D002065 ORTHO05D002050 3.9e-07 59.3 180 25.6
MBI18_g41997_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 5.1e-07 58.9 168 28.6
CANSAT64G1415 Cannabis sativa HOM05D002065 ORTHO05D002050 6.7e-07 58.5 191 26.2
CiPaw.09G086600 Carya illinoinensis HOM05D004864 ORTHO05D005393 8.7e-07 58.2 171 24.0
RcHm_v2.0_Chr5g0004121 Rosa chinensis HOM05D002065 ORTHO05D002050 8.7e-07 58.2 172 26.2
CARHR096380 Cardamine hirsuta HOM05D002065 ORTHO05D002050 1.1e-06 57.8 190 24.2
TWI38G0302 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 1.1e-06 57.8 90 33.3
Oeu062613.1 Olea europaea HOM05D002065 ORTHO05D002050 1.9e-06 57.0 199 23.1
Cfa021639 Carpinus fangiana HOM05D004864 ORTHO05D005393 2.5e-06 56.6 171 24.6
Dinv40711 Davidia involucrata HOM05D002065 ORTHO05D001766 2.5e-06 56.6 158 28.5
TPR.G5531 Trifolium pratense HOM05D004864 ORTHO05D005393 2.5e-06 56.6 168 28.0
Atru.chr2.3214 Acer truncatum HOM05D002065 ORTHO05D002050 3.3e-06 56.2 193 24.4
SMO172G0012 Selaginella moellendorffii HOM05D000973 ORTHO05D000649 3.3e-06 56.2 94 30.9
BcaB01g01894 Brassica carinata HOM05D004864 ORTHO05D005393 7.4e-06 55.1 171 23.4
CiPaw.06G066300 Carya illinoinensis HOM05D002540 ORTHO05D002672 7.4e-06 55.1 94 36.2
MELO3C002487.2 Cucumis melo HOM05D060685 ORTHO05D002050 7.4e-06 55.1 77 36.4
Dinv22303 Davidia involucrata HOM05D002065 ORTHO05D002050 7.4e-06 55.1 165 23.6
Duzib160G0710 Durio zibethinus HOM05D004864 ORTHO05D005393 7.4e-06 55.1 171 25.1
Eucgr.D00820 Eucalyptus grandis HOM05D002065 ORTHO05D002050 7.4e-06 55.1 67 47.8
Peaxi162Scf00392g00045 Petunia axillaris HOM05D000733 ORTHO05D000649 7.4e-06 55.1 96 32.3
Duzib192G0146 Durio zibethinus HOM05D004864 ORTHO05D005393 9.7e-06 54.7 171 24.6
Sp6g03770 Schrenkiella parvula HOM05D004864 ORTHO05D005393 9.7e-06 54.7 171 23.4


User provided reference genes

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