Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 3.3e-136 488.4 258 100.0
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 8.7e-68 261.2 262 56.9
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 1.1e-65 254.2 260 56.5
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 3.7e-58 229.2 254 49.6
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 4.8e-58 228.8 254 49.6
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 1.4e-57 227.3 254 49.6
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 1.4e-57 227.3 255 49.8
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 1.4e-57 227.3 254 50.8
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 1.8e-57 226.9 254 49.6
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 1.8e-57 226.9 254 49.2
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.8e-57 226.9 254 49.6
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 2.4e-57 226.5 254 50.8
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 3.1e-57 226.1 254 49.6
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 3.1e-57 226.1 254 50.8
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 3.1e-57 226.1 254 50.4
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 6.9e-57 224.9 254 49.6
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 6.9e-57 224.9 254 49.2
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 9.0e-57 224.6 254 48.4
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 1.2e-56 224.2 254 49.6
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 3.4e-56 222.6 254 49.2
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 7.6e-56 221.5 254 49.2
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 1.0e-55 221.1 261 48.7
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 1.0e-55 221.1 261 49.0
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 1.3e-55 220.7 264 47.7
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 1.3e-55 220.7 261 48.7
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 1.7e-55 220.3 257 48.6
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 1.7e-55 220.3 254 48.0
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 2.9e-55 219.5 254 48.8
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 2.9e-55 219.5 254 48.8
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 2.9e-55 219.5 261 49.0
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 3.8e-55 219.2 254 48.0
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 4.9e-55 218.8 254 48.0
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 4.9e-55 218.8 254 48.8
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 4.9e-55 218.8 254 48.0
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 6.5e-55 218.4 257 47.9
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 6.5e-55 218.4 254 47.6
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 6.5e-55 218.4 254 48.0
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 8.4e-55 218.0 261 48.7
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 8.4e-55 218.0 254 47.6
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 8.4e-55 218.0 261 49.0
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 1.1e-54 217.6 254 49.2
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 1.1e-54 217.6 254 47.6
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 1.4e-54 217.2 254 47.6
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 1.4e-54 217.2 261 48.7
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 1.4e-54 217.2 254 48.0
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 1.4e-54 217.2 254 48.0
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 1.9e-54 216.9 254 47.6
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 1.9e-54 216.9 261 48.7
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 2.5e-54 216.5 254 47.2
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 3.2e-54 216.1 254 48.0
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 3.2e-54 216.1 254 47.2
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 3.2e-54 216.1 254 47.2
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 3.2e-54 216.1 261 47.9
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 3.2e-54 216.1 254 48.0
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 3.2e-54 216.1 254 48.0
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 4.2e-54 215.7 261 51.7
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 4.2e-54 215.7 254 46.5
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 4.2e-54 215.7 254 48.4
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 5.5e-54 215.3 254 47.6
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 5.5e-54 215.3 254 48.0
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 5.5e-54 215.3 254 47.6
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 5.5e-54 215.3 254 47.6
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 5.5e-54 215.3 254 48.0
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 5.5e-54 215.3 254 48.0
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 7.1e-54 214.9 251 47.4
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 9.3e-54 214.5 254 47.6
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 9.3e-54 214.5 254 47.6
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 1.2e-53 214.2 254 48.0
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 1.2e-53 214.2 254 48.4
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.2e-53 214.2 254 47.2
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 1.6e-53 213.8 254 48.0
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 1.6e-53 213.8 254 47.6
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 2.1e-53 213.4 254 48.0
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.7e-53 213.0 254 47.6
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 2.7e-53 213.0 254 47.2
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 3.5e-53 212.6 254 47.6
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 6.0e-53 211.8 254 48.4
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 6.0e-53 211.8 254 47.2
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 6.0e-53 211.8 254 47.2
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 6.0e-53 211.8 254 47.6
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 6.0e-53 211.8 254 47.2
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 7.9e-53 211.5 254 47.2
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 7.9e-53 211.5 256 47.3
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 7.9e-53 211.5 254 47.2
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 1.0e-52 211.1 254 48.4
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.3e-52 210.7 254 47.2
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.3e-52 210.7 254 46.9
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 1.8e-52 210.3 254 46.9
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 2.3e-52 209.9 254 46.1
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 3.0e-52 209.5 254 46.5
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 3.9e-52 209.1 231 49.8
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 8.7e-52 208.0 254 46.9
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 8.7e-52 208.0 288 45.5
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 1.1e-51 207.6 255 46.3
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 2.5e-51 206.5 254 45.7
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 8.2e-50 201.4 258 45.7
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 1.8e-49 200.3 258 45.3
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 5.3e-49 198.7 285 42.1
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 6.9e-49 198.4 283 43.1
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 3.4e-48 196.1 276 42.8
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.9e-46 190.3 221 47.5
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 4.6e-45 185.7 189 52.4
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 4.6e-45 185.7 272 42.3
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 6.1e-45 185.3 202 52.0
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.3e-42 177.6 271 42.8
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 3.4e-40 169.5 238 44.5
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 7.2e-38 161.8 254 40.6
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 9.4e-38 161.4 186 50.0
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 2.3e-36 156.8 257 42.0
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.5e-35 154.1 185 47.6
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 7.4e-35 151.8 186 47.3
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 9.7e-35 151.4 276 37.0
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 1.4e-30 137.5 156 51.3
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 3.0e-28 129.8 152 48.7
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 4.2e-22 109.4 118 47.5
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 1.1e-17 94.7 101 50.5
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 2.1e-13 80.5 102 46.1
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 1.2e-11 74.7 154 33.1
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 3.4e-11 73.2 88 46.6


User provided reference genes

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