Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021594 Carpinus fangiana HOM05D001956 ORTHO05D002035 1.3e-51 206.1 103 100.0
QL01p028873 Quercus lobata HOM05D001956 ORTHO05D002035 1.1e-21 106.7 82 72.0
CiPaw.14G063200 Carya illinoinensis HOM05D001956 ORTHO05D002035 1.9e-18 95.9 85 65.9
Cfa011622 Carpinus fangiana HOM05D001956 ORTHO05D002035 2.8e-17 92.0 84 61.9
MD03G1081200 Malus domestica HOM05D001956 ORTHO05D002035 1.8e-16 89.4 97 55.7
RcHm_v2.0_Chr5g0067231 Rosa chinensis HOM05D001956 ORTHO05D002035 9.9e-15 83.6 97 55.7
FAN21G0046 Fragaria x ananassa HOM05D001956 ORTHO05D002035 1.1e-13 80.1 95 54.7
CiPaw.13G084600 Carya illinoinensis HOM05D001956 ORTHO05D002035 1.4e-13 79.7 84 58.3
MD11G1084800 Malus domestica HOM05D001956 ORTHO05D002035 5.4e-13 77.8 97 51.5
CSS0011961 Camellia sinensis var. sinensis HOM05D001956 ORTHO05D002035 1.6e-12 76.3 83 59.0
Haze_24224 Corylus avellana HOM05D001956 ORTHO05D002035 2.7e-12 75.5 84 53.6
Manes.01G166800 Manihot esculenta HOM05D001956 ORTHO05D002035 3.5e-12 75.1 82 54.9
Hma1.2p1_0543F.1_g175370 Hydrangea macrophylla HOM05D001956 ORTHO05D002035 6.0e-12 74.3 85 52.9
Rhsim01G0234000 Rhododendron simsii HOM05D001956 ORTHO05D002035 1.3e-11 73.2 80 55.0
TWI79G1635 Tripterygium wilfordii HOM05D001956 ORTHO05D002035 6.6e-11 70.9 87 54.0
Lalb_Chr14g0372081 Lupinus albus HOM05D001956 ORTHO05D002035 8.7e-11 70.5 82 48.8
Cpa.g.sc112.98 Carica papaya HOM05D001956 ORTHO05D002035 1.1e-10 70.1 97 49.5
Potri.009G039300 Populus trichocarpa HOM05D001956 ORTHO05D002035 1.9e-10 69.3 78 56.4
Duzib168G1880 Durio zibethinus HOM05D001956 ORTHO05D002035 4.3e-10 68.2 81 55.6
Gohir.A05G091500 Gossypium hirsutum HOM05D001956 ORTHO05D002035 7.3e-10 67.4 79 57.0
Gohir.D05G092400 Gossypium hirsutum HOM05D001956 ORTHO05D002035 9.6e-10 67.0 79 58.2
Gorai.009G094900 Gossypium raimondii HOM05D001956 ORTHO05D002035 9.6e-10 67.0 79 58.2
Lj2A1072T118 Lonicera japonica HOM05D001956 ORTHO05D002035 9.6e-10 67.0 78 52.6
Duzib150G1633 Durio zibethinus HOM05D001956 ORTHO05D002035 3.6e-09 65.1 99 47.5
Potri.001G246200 Populus trichocarpa HOM05D001956 ORTHO05D002035 3.6e-09 65.1 78 53.8
Glyma.15G034800 Glycine max HOM05D001956 ORTHO05D002035 4.8e-09 64.7 82 46.3
Manes.02G124400 Manihot esculenta HOM05D001956 ORTHO05D002035 4.8e-09 64.7 82 51.2
Lj1A144T51 Lonicera japonica HOM05D001956 ORTHO05D002035 6.2e-09 64.3 99 47.5
TWI31G0404 Tripterygium wilfordii HOM05D001956 ORTHO05D002035 6.2e-09 64.3 85 47.1
Ca_01299_v3 Cicer arietinum L. HOM05D001956 ORTHO05D002035 2.4e-08 62.4 82 45.1
Sabra16G0149400 Salix brachista HOM05D001956 ORTHO05D002035 2.4e-08 62.4 78 51.3
Thecc.09G309700 Theobroma cacao HOM05D001956 ORTHO05D002035 1.2e-07 60.1 98 43.9
Cc01_g13590 Coffea canephora HOM05D001956 ORTHO05D002035 2.0e-07 59.3 83 45.8
COL.COLO4_19066 Corchorus olitorius HOM05D001956 ORTHO05D002803 2.0e-07 59.3 98 44.9
Glyma.13G339600 Glycine max HOM05D001956 ORTHO05D002035 2.0e-07 59.3 82 45.1
Ciclev10027780m.g Citrus clementina HOM05D001956 ORTHO05D002035 2.6e-07 58.9 79 41.8
Dinv17071 Davidia involucrata HOM05D001956 ORTHO05D002035 4.5e-07 58.2 84 44.0
Dinv43015 Davidia involucrata HOM05D001956 ORTHO05D002035 4.5e-07 58.2 84 44.0
Dinv43082 Davidia involucrata HOM05D001956 ORTHO05D002035 4.5e-07 58.2 84 44.0
VMungo1080G1899 Vigna mungo HOM05D001956 ORTHO05D002035 1.3e-06 56.6 82 43.9
CANSAT54G1355 Cannabis sativa HOM05D001956 ORTHO05D002035 2.2e-06 55.8 99 42.4
arahy.Tifrunner.gnm1.ann1.P5QYP7 Arachis hypogaea HOM05D001956 ORTHO05D002035 6.4e-06 54.3 80 40.0
arahy.Tifrunner.gnm1.ann1.WADY44 Arachis hypogaea HOM05D001956 ORTHO05D002035 6.4e-06 54.3 80 40.0
ECA236G3348 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.4e-06 53.9 80 47.5


User provided reference genes

Program Settings