Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 4.4e-292 1007.3 527 100.0
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 3.7e-190 668.7 545 70.5
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 4.5e-188 661.8 546 70.7
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 3.3e-183 645.6 508 73.6
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 2.2e-158 563.1 547 60.0
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 3.2e-157 559.3 415 76.6
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 2.3e-152 543.1 545 57.8
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 1.9e-149 533.5 519 59.9
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 9.2e-149 531.2 545 58.7
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 5.0e-147 525.4 518 58.3
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 3.6e-145 519.2 525 56.8
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 1.1e-144 517.7 495 61.2
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 4.0e-144 515.8 545 59.1
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 9.2e-141 504.6 534 58.1
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 9.2e-141 504.6 534 56.6
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 3.5e-140 502.7 538 55.2
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 3.5e-140 502.7 534 56.2
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 7.8e-140 501.5 550 53.5
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 1.3e-139 500.7 534 54.3
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 8.6e-139 498.0 541 56.9
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 1.5e-138 497.3 552 54.9
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 6.8e-136 488.4 410 70.0
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 1.5e-135 487.3 542 55.2
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 2.0e-135 486.9 546 54.9
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.6e-135 486.5 551 55.9
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 3.4e-135 486.1 538 54.6
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 2.9e-134 483.0 543 52.9
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 4.9e-134 482.3 540 53.5
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.2e-132 477.6 551 55.4
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 9.6e-130 468.0 543 52.7
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 1.2e-129 467.6 585 50.9
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 1.1e-128 464.5 532 53.4
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 2.6e-127 459.9 543 51.6
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 2.6e-127 459.9 519 50.7
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 2.2e-126 456.8 518 53.1
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 3.8e-126 456.1 546 51.3
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 9.3e-125 451.4 523 53.0
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.3e-123 447.6 508 52.8
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 8.7e-123 444.9 533 51.8
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 1.6e-121 440.7 535 50.5
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 1.1e-120 438.0 509 52.5
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.8e-120 437.2 492 54.1
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 2.2e-118 430.3 534 49.6
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 2.9e-118 429.9 559 51.0
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 2.4e-117 426.8 523 51.2
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 3.2e-117 426.4 511 50.7
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 4.2e-117 426.0 550 49.8
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 9.3e-117 424.9 541 48.8
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 7.9e-116 421.8 530 49.2
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.3e-115 421.0 536 48.1
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 1.7e-115 420.6 511 49.1
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 5.1e-115 419.1 538 47.0
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 6.6e-115 418.7 508 49.4
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 6.6e-115 418.7 588 47.4
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 6.6e-115 418.7 542 48.5
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 5.6e-114 415.6 522 48.9
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 1.1e-112 411.4 508 49.4
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 5.3e-112 409.1 565 47.4
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 7.6e-111 405.2 504 49.4
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 1.3e-110 404.4 543 49.2
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 4.9e-110 402.5 523 46.8
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 1.1e-109 401.4 525 49.1
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 1.1e-109 401.4 525 49.1
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 1.4e-109 401.0 428 54.4
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 3.2e-109 399.8 525 48.2
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 7.1e-109 398.7 518 49.4
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 1.3e-107 394.4 563 45.6
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 1.8e-107 394.0 543 45.9
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 3.0e-107 393.3 546 44.1
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 4.3e-106 389.4 549 46.8
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 9.6e-106 388.3 477 49.5
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 1.3e-105 387.9 529 45.9
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 1.6e-105 387.5 533 46.7
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 8.1e-105 385.2 531 46.9
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 1.1e-104 384.8 541 45.3
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 5.3e-104 382.5 540 45.9
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 4.5e-103 379.4 519 46.8
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 5.8e-103 379.0 514 46.1
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.3e-102 377.9 547 45.7
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 4.9e-102 375.9 576 46.0
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 8.4e-102 375.2 551 44.5
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 1.4e-101 374.4 526 44.5
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 1.2e-100 371.3 499 47.5
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 2.7e-100 370.2 549 44.6
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 5.1e-99 365.9 474 48.3
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 1.6e-97 360.9 501 46.9
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 3.7e-97 359.8 593 42.2
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.3e-94 351.3 475 46.5
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 2.9e-94 350.1 355 57.7
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 1.9e-90 337.4 383 53.5
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 3.7e-89 333.2 545 44.4
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 5.3e-88 329.3 508 41.3
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 1.8e-83 314.3 443 45.1
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 3.0e-75 287.0 376 46.5
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 2.2e-70 270.8 578 36.2
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 4.4e-66 256.5 560 35.2
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 4.4e-66 256.5 563 35.0
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 1.3e-62 245.0 525 36.0
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 1.3e-62 245.0 463 39.7
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 1.8e-59 234.6 225 65.3
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 3.1e-56 223.8 193 62.2
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 3.5e-55 220.3 560 31.1
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 1.0e-54 218.8 517 34.2
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 2.1e-52 211.1 384 38.0
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 1.4e-51 208.4 392 34.7
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 9.8e-50 202.2 183 61.7
Haze_23483 Corylus avellana HOM05D006347 ORTHO05D007835 2.2e-49 201.1 152 76.3
Haze_23490 Corylus avellana HOM05D006347 ORTHO05D007835 9.2e-48 195.7 195 61.0
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 3.4e-42 177.2 442 31.0
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 3.7e-41 173.7 203 51.2
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 7.0e-40 169.5 222 51.4
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 2.9e-33 147.5 158 55.7
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 2.0e-31 141.4 216 44.4
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 6.6e-22 109.8 201 34.3
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.8e-19 101.7 106 54.7
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 3.1e-19 100.9 153 44.4
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 4.1e-16 90.5 475 24.6
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 6.6e-14 83.2 103 46.6
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 6.8e-11 73.2 52 73.1
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 4.9e-09 67.0 89 41.6
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 1.4e-08 65.5 128 35.9
Haze_23481 Corylus avellana HOM05D052174 ORTHO05D007835 1.9e-08 65.1 38 89.5
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 2.3e-06 58.2 118 35.6
Haze_23485 Corylus avellana HOM05D052174 ORTHO05D007835 3.9e-06 57.4 44 70.5


User provided reference genes

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