Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021458 Carpinus fangiana HOM05D000626 ORTHO05D003868 3.1e-273 944.5 471 100.0
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 3.2e-44 183.7 444 28.8
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 9.4e-44 182.2 473 30.2
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 1.0e-42 178.7 468 29.7
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 1.4e-42 178.3 460 29.1
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 1.8e-42 177.9 447 29.3
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 1.8e-42 177.9 430 30.7
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 2.3e-42 177.6 461 28.9
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 3.0e-42 177.2 468 29.7
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 5.1e-42 176.4 462 29.0
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 5.1e-42 176.4 468 29.5
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 5.1e-42 176.4 462 28.4
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 6.7e-42 176.0 432 29.6
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 8.8e-42 175.6 470 29.1
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 1.1e-41 175.3 460 28.7
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 1.1e-41 175.3 468 29.5
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 1.1e-41 175.3 468 29.7
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 1.5e-41 174.9 468 29.3
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 1.5e-41 174.9 467 28.3
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 2.5e-41 174.1 462 28.8
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 2.5e-41 174.1 470 27.7
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 3.3e-41 173.7 470 27.7
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 5.7e-41 172.9 461 28.4
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 5.7e-41 172.9 458 28.6
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 7.4e-41 172.6 467 28.3
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 7.4e-41 172.6 467 27.8
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 9.7e-41 172.2 480 28.5
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 9.7e-41 172.2 463 28.9
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 1.3e-40 171.8 467 28.1
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 1.7e-40 171.4 460 27.6
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 1.7e-40 171.4 445 29.0
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 1.7e-40 171.4 463 28.7
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 2.8e-40 170.6 471 28.7
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 3.7e-40 170.2 473 27.3
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 4.8e-40 169.9 463 27.6
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 4.8e-40 169.9 445 28.8
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 4.8e-40 169.9 471 26.8
CBR_g28880 Chara braunii HOM05D000626 ORTHO05D003868 6.3e-40 169.5 455 29.5
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 6.3e-40 169.5 466 28.1
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 6.3e-40 169.5 472 27.3
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 6.3e-40 169.5 441 28.3
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 8.2e-40 169.1 467 27.6
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 8.2e-40 169.1 469 28.1
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 8.2e-40 169.1 436 29.6
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 8.2e-40 169.1 463 27.9
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 1.1e-39 168.7 447 28.2
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 1.4e-39 168.3 467 27.6
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 1.4e-39 168.3 458 28.6
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.4e-39 168.3 455 28.8
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 1.4e-39 168.3 458 29.0
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.4e-39 168.3 448 28.8
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 1.4e-39 168.3 443 27.3
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 1.8e-39 167.9 462 28.1
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 1.8e-39 167.9 431 28.8
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.8e-39 167.9 469 28.4
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 1.8e-39 167.9 469 27.3
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 2.4e-39 167.5 471 27.2
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 2.4e-39 167.5 470 27.4
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 3.1e-39 167.2 458 28.8
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 3.1e-39 167.2 467 27.4
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.1e-39 167.2 469 28.8
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 4.1e-39 166.8 443 27.3
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 4.1e-39 166.8 431 29.2
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 4.1e-39 166.8 469 27.7
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 5.3e-39 166.4 465 28.2
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 6.9e-39 166.0 444 27.9
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 6.9e-39 166.0 442 29.2
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 9.1e-39 165.6 460 27.2
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 9.1e-39 165.6 458 28.8
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 1.2e-38 165.2 458 28.2
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 1.2e-38 165.2 464 26.9
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 1.2e-38 165.2 468 27.6
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 1.2e-38 165.2 461 26.9
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 1.5e-38 164.9 460 27.6
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.5e-38 164.9 412 28.4
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.5e-38 164.9 448 27.2
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 2.6e-38 164.1 466 26.8
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 2.6e-38 164.1 446 27.4
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 2.6e-38 164.1 446 26.9
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 2.6e-38 164.1 447 28.2
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 4.5e-38 163.3 441 27.9
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 4.5e-38 163.3 465 27.1
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 5.9e-38 162.9 462 28.1
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 5.9e-38 162.9 459 29.0
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 5.9e-38 162.9 470 27.2
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 5.9e-38 162.9 458 28.6
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 5.9e-38 162.9 475 27.2
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 7.7e-38 162.5 471 27.4
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 7.7e-38 162.5 447 27.1
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 1.3e-37 161.8 446 27.4
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.7e-37 161.4 460 27.4
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 1.7e-37 161.4 461 27.5
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 1.7e-37 161.4 442 27.8
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 1.7e-37 161.4 468 26.5
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 2.2e-37 161.0 429 27.5
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 2.2e-37 161.0 460 27.8
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 2.9e-37 160.6 443 27.3
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 2.9e-37 160.6 439 28.0
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 3.8e-37 160.2 460 27.0
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 3.8e-37 160.2 469 27.9
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 3.8e-37 160.2 468 27.4
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 5.0e-37 159.8 470 25.5
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 8.5e-37 159.1 473 27.7
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 1.1e-36 158.7 443 27.1
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 1.9e-36 157.9 460 27.0
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.9e-36 157.9 439 27.1
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 2.5e-36 157.5 465 28.0
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 2.5e-36 157.5 441 27.7
Cre14.g614100 Chlamydomonas reinhardtii HOM05D000626 ORTHO05D003868 3.2e-36 157.1 414 30.0
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 3.2e-36 157.1 465 27.3
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 4.2e-36 156.8 461 27.8
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 4.2e-36 156.8 465 26.7
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 4.2e-36 156.8 443 26.4
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 4.2e-36 156.8 488 27.0
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 5.5e-36 156.4 464 26.5
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 5.5e-36 156.4 463 25.9
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 5.5e-36 156.4 465 25.6
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 7.2e-36 156.0 445 27.0
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 7.2e-36 156.0 442 26.9
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 7.2e-36 156.0 423 27.9
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 2.1e-35 154.5 442 25.8
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 7.9e-35 152.5 463 25.7
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 7.9e-35 152.5 463 25.7
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 7.9e-35 152.5 463 27.2
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 1.0e-34 152.1 407 27.5
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.0e-34 152.1 464 25.6
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 1.0e-34 152.1 417 27.8
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 1.0e-34 152.1 508 25.2
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 1.4e-34 151.8 463 25.1
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 5.1e-34 149.8 463 25.7
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 1.5e-33 148.3 434 28.6
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 2.0e-33 147.9 400 27.5
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 5.7e-33 146.4 448 26.6
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 5.7e-33 146.4 413 26.4
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 1.7e-32 144.8 415 27.2
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 2.2e-32 144.4 466 24.9
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 3.7e-32 143.7 408 26.7
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 5.3e-31 139.8 438 26.0
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 3.5e-30 137.1 434 26.5
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 7.7e-30 136.0 475 25.5
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 2.2e-29 134.4 408 26.5
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 2.2e-29 134.4 379 28.2
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 1.9e-28 131.3 485 24.1
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 1.6e-27 128.3 354 26.8
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 2.1e-27 127.9 405 26.4
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 3.6e-27 127.1 365 26.0
Dinv23553 Davidia involucrata HOM05D000626 ORTHO05D003868 1.4e-26 125.2 277 31.0
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.7e-24 118.2 385 25.2
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.4e-23 115.2 412 24.0
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 1.3e-21 108.6 442 22.9
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 5.5e-20 103.2 465 22.2
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 1.8e-18 98.2 306 26.1
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 4.8e-16 90.1 353 24.6
Lsat_1_v5_gn_4_144441 Lactuca sativa HOM05D000626 ORTHO05D003868 2.4e-15 87.8 454 22.7
HPP92_010239 Vanilla planifolia HOM05D000626 ORTHO05D003868 2.1e-11 74.7 275 26.9
Nitab4.5_0022318g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.7e-06 57.8 235 22.1


User provided reference genes

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