Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021411 Carpinus fangiana HOM05D037556 ORTHO05D028641 6.6e-207 723.8 361 100.0
MCO15G159 Micromonas commoda HOM05D037556 ORTHO05D028641 3.9e-106 389.0 353 52.4
PRCOL_00005370 Prasinoderma coloniale HOM05D037556 ORTHO05D028641 2.8e-104 382.9 337 54.9
Pp3s34_503 Physcomitrium patens HOM05D004254 ORTHO05D005184 5.0e-13 79.7 281 26.0
SEGI_15506 Sequoiadendron giganteum HOM05D004254 ORTHO05D005184 1.9e-12 77.8 308 27.9
ECA233G1972 Erigeron canadensis HOM05D004254 ORTHO05D005184 1.6e-11 74.7 284 27.8
SGA_v2.0_scaffold28G11766 Striga asiatica HOM05D004254 ORTHO05D005184 2.8e-11 73.9 289 26.3
Phvul.004G150100 Phaseolus vulgaris HOM05D004254 ORTHO05D005184 4.7e-11 73.2 283 27.2
Gohir.D02G121800 Gossypium hirsutum HOM05D004254 ORTHO05D005184 2.3e-10 70.9 283 25.8
COL.COLO4_06962 Corchorus olitorius HOM05D004254 ORTHO05D005184 3.0e-10 70.5 277 27.1
Lsat_1_v5_gn_8_141761 Lactuca sativa HOM05D004254 ORTHO05D005184 3.0e-10 70.5 279 28.3
VMungo0464G0766 Vigna mungo HOM05D004254 ORTHO05D005184 3.0e-10 70.5 283 26.9
Gorai.005G132300 Gossypium raimondii HOM05D004254 ORTHO05D005184 4.0e-10 70.1 277 25.6
MBI12_g17290_MAGBIO Magnolia biondii HOM05D004254 ORTHO05D005184 4.0e-10 70.1 288 28.1
Thecc.03G057600 Theobroma cacao HOM05D004254 ORTHO05D005184 4.0e-10 70.1 279 27.6
Lalb_Chr14g0370611 Lupinus albus HOM05D004254 ORTHO05D005184 5.2e-10 69.7 277 27.4
Mapoly0094s0055 Marchantia polymorpha HOM05D004254 ORTHO05D005184 5.2e-10 69.7 303 27.1
Nn4g24265 Nelumbo nucifera HOM05D004254 ORTHO05D005184 6.8e-10 69.3 218 28.9
QL10p030432 Quercus lobata HOM05D004254 ORTHO05D005184 8.8e-10 68.9 285 26.3
Aqoxy3G00045 Aquilegia oxysepala HOM05D004254 ORTHO05D005184 2.0e-09 67.8 284 26.4
Lj5A159T43 Lonicera japonica HOM05D004254 ORTHO05D005184 2.0e-09 67.8 283 27.2
Gohir.A03G092900 Gossypium hirsutum HOM05D004254 ORTHO05D005184 3.4e-09 67.0 277 25.6
TAR629G2841 Trochodendron aralioides HOM05D004254 ORTHO05D005184 4.4e-09 66.6 283 27.9
FAN04G2545 Fragaria x ananassa HOM05D004254 ORTHO05D005184 5.7e-09 66.2 283 25.4
PSO017G0085 Papaver somniferum HOM05D004254 ORTHO05D005184 5.7e-09 66.2 282 27.7
PSO478G1825 Papaver somniferum HOM05D004254 ORTHO05D005184 5.7e-09 66.2 283 27.6
FAN13G1575 Fragaria x ananassa HOM05D004254 ORTHO05D005184 7.5e-09 65.9 279 26.2
Glyma.07G103000 Glycine max HOM05D004254 ORTHO05D005184 9.8e-09 65.5 283 25.8
ATR1102G008 Amborella trichopoda HOM05D004254 ORTHO05D005184 1.3e-08 65.1 279 27.6
Haze_18876 Corylus avellana HOM05D004254 ORTHO05D005184 1.3e-08 65.1 285 25.3
CiPaw.15G144100 Carya illinoinensis HOM05D004254 ORTHO05D005184 1.7e-08 64.7 283 26.1
Zm00001eb280650 Zea mays HOM05D004254 ORTHO05D005184 1.7e-08 64.7 285 28.8
FAN08G2057 Fragaria x ananassa HOM05D004254 ORTHO05D005184 2.2e-08 64.3 279 26.2
HPP92_023491 Vanilla planifolia HOM05D004254 ORTHO05D005184 2.2e-08 64.3 280 27.5
Medtr0937s0020 Medicago truncatula HOM05D002248 ORTHO05D028641 3.7e-08 63.5 321 24.6
Os06g0258900 Oryza sativa ssp. japonica HOM05D004254 ORTHO05D005184 4.9e-08 63.2 290 26.9
Sc10g0009220 Simmondsia chinensis HOM05D004254 ORTHO05D005184 1.8e-07 61.2 279 26.2
SMO117G0106 Selaginella moellendorffii HOM05D004254 ORTHO05D005184 7.0e-07 59.3 277 26.4
Hma1.2p1_0163F.1_g073050 Hydrangea macrophylla HOM05D004254 ORTHO05D005184 1.6e-06 58.2 280 25.0


User provided reference genes

Program Settings