Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021347 Carpinus fangiana HOM05D000135 ORTHO05D000816 1.4e-19 100.1 49 100.0
Haze_14848 Corylus avellana HOM05D000135 ORTHO05D000816 8.5e-17 90.9 48 91.7
QL02p071822 Quercus lobata HOM05D000135 ORTHO05D000816 4.7e-15 85.1 49 83.7
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 5.2e-14 81.6 48 79.2
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 2.6e-13 79.3 48 72.9
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 4.4e-13 78.6 50 80.0
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 7.4e-13 77.8 48 72.9
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 1.3e-12 77.0 48 72.9
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 1.7e-12 76.6 48 75.0
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.7e-12 76.6 48 75.0
Lj7C609T6 Lonicera japonica HOM05D000135 ORTHO05D000816 2.2e-12 76.3 48 75.0
TWI12G0256 Tripterygium wilfordii HOM05D000135 ORTHO05D000816 2.2e-12 76.3 49 73.5
Ciclev10018267m.g Citrus clementina HOM05D000135 ORTHO05D000816 3.7e-12 75.5 46 78.3
Duzib264G0451 Durio zibethinus HOM05D000135 ORTHO05D000816 4.8e-12 75.1 47 70.2
Duzib264G0910 Durio zibethinus HOM05D000135 ORTHO05D000816 4.8e-12 75.1 47 70.2
SalBow1G2517 Salvia bowleyana HOM05D016915 ORTHO05D000816 6.3e-12 74.7 49 73.5
SalBow7G4752 Salvia bowleyana HOM05D016915 ORTHO05D000816 6.3e-12 74.7 49 73.5
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 6.3e-12 74.7 48 70.8
CANSAT64G0052 Cannabis sativa HOM05D000135 ORTHO05D000816 1.1e-11 73.9 48 72.9
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 1.1e-11 73.9 48 72.9
TPR.G39344 Trifolium pratense HOM05D000135 ORTHO05D000816 1.1e-11 73.9 49 71.4
Gohir.D04G078000 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.4e-11 73.6 49 67.3
Gorai.012G087800 Gossypium raimondii HOM05D000135 ORTHO05D000816 1.4e-11 73.6 49 67.3
Hma1.2p1_1219F.1_g267970 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 1.4e-11 73.6 49 73.5
Hma1.2p1_2105F.1_g314145 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 1.4e-11 73.6 49 73.5
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 1.4e-11 73.6 47 72.3
RcHm_v2.0_Chr2g0175201 Rosa chinensis HOM05D000135 ORTHO05D000816 1.8e-11 73.2 48 72.9
Cc07_g00660 Coffea canephora HOM05D000135 ORTHO05D000816 2.4e-11 72.8 49 69.4
Sabra16G0213700 Salix brachista HOM05D000135 ORTHO05D000816 2.4e-11 72.8 48 66.7
Sabra16G0213800 Salix brachista HOM05D000135 ORTHO05D000816 2.4e-11 72.8 48 66.7
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 5.3e-11 71.6 49 69.4
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 5.3e-11 71.6 49 69.4
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 7.0e-11 71.2 48 70.8
Hma1.2p1_1219F.1_g267940 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 7.0e-11 71.2 49 69.4
SalBow7G4318 Salvia bowleyana HOM05D016915 ORTHO05D000816 7.0e-11 71.2 49 69.4
Gohir.A05G339500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 9.1e-11 70.9 49 65.3
Lalb_Chr14g0363211 Lupinus albus HOM05D000135 ORTHO05D000816 9.1e-11 70.9 49 67.3
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 9.1e-11 70.9 49 69.4
SalBow1G3513 Salvia bowleyana HOM05D016915 ORTHO05D000816 9.1e-11 70.9 49 69.4
VMungo0464G1988 Vigna mungo HOM05D000135 ORTHO05D000816 1.2e-10 70.5 49 67.3
MSTRG.3087 Avicennia marina HOM05D000135 ORTHO05D000816 1.6e-10 70.1 49 69.4
Migut.K01452 Erythranthe guttata HOM05D016915 ORTHO05D000816 1.6e-10 70.1 49 67.3
Hma1.2p1_1219F.1_g267950 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 1.6e-10 70.1 49 71.4
Medtr6g023460 Medicago truncatula HOM05D000135 ORTHO05D000816 1.6e-10 70.1 49 69.4
Psat3g176000 Pisum sativum HOM05D000135 ORTHO05D000816 1.6e-10 70.1 48 70.8
Dinv33354 Davidia involucrata HOM05D000135 ORTHO05D000816 2.0e-10 69.7 49 71.4
Glyma.16G059300 Glycine max HOM05D000135 ORTHO05D000816 2.0e-10 69.7 49 65.3
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 2.0e-10 69.7 48 70.8
Rhsim10G0007700 Rhododendron simsii HOM05D000135 ORTHO05D000816 2.0e-10 69.7 48 70.8
Rhsim10G0007900 Rhododendron simsii HOM05D000135 ORTHO05D000816 2.0e-10 69.7 48 70.8
Actinidia05909 Actinidia chinensis HOM05D000135 ORTHO05D000816 3.5e-10 68.9 49 65.3
Eucgr.J02318 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.5e-10 68.9 47 68.1
Glyma.19G088200 Glycine max HOM05D000135 ORTHO05D000816 4.5e-10 68.6 49 65.3
Lju41C51T3 Lonicera japonica HOM05D000135 ORTHO05D000816 4.5e-10 68.6 44 72.7
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 5.9e-10 68.2 47 66.0
Phvul.004G055200 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 5.9e-10 68.2 49 65.3
Rhsim08G0044100 Rhododendron simsii HOM05D000135 ORTHO05D000816 5.9e-10 68.2 49 65.3
ECA232G4862 Erigeron canadensis HOM05D000135 ORTHO05D000816 1.0e-09 67.4 49 69.4
MD09G1013600 Malus domestica HOM05D000135 ORTHO05D000816 1.0e-09 67.4 48 68.8
Rhsim10G0008000 Rhododendron simsii HOM05D000135 ORTHO05D000816 1.0e-09 67.4 48 68.8
Migut.K01450 Erythranthe guttata HOM05D000135 ORTHO05D000816 1.3e-09 67.0 49 65.3
Oeu011957.1 Olea europaea HOM05D000135 ORTHO05D000816 1.7e-09 66.6 51 66.7
Lalb_Chr22g0360481 Lupinus albus HOM05D000135 ORTHO05D000816 2.2e-09 66.2 49 63.3
Rhsim10G0007800 Rhododendron simsii HOM05D000135 ORTHO05D000816 2.2e-09 66.2 48 68.8
Migut.K01451 Erythranthe guttata HOM05D000135 ORTHO05D000816 2.9e-09 65.9 49 63.3
Phvul.001G095600 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 3.8e-09 65.5 47 68.1
SGA_v2.0_scaffold47G17572 Striga asiatica HOM05D000135 ORTHO05D000816 3.8e-09 65.5 49 61.2
Ca_28119_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 5.0e-09 65.1 47 63.8
Prupe.5G000600 Prunus persica HOM05D000135 ORTHO05D000816 5.0e-09 65.1 47 66.0
HanXRQChr15g0486921 Helianthus annuus HOM05D000135 ORTHO05D000816 6.5e-09 64.7 49 61.2
DCAR_015089 Daucus carota HOM05D000135 ORTHO05D000816 8.5e-09 64.3 48 62.5
Lsat_1_v5_gn_4_185301 Lactuca sativa HOM05D000135 ORTHO05D000816 8.5e-09 64.3 49 63.3
TPR.G38330 Trifolium pratense HOM05D000135 ORTHO05D000816 8.5e-09 64.3 48 66.7
QL02p016392 Quercus lobata HOM05D000135 ORTHO05D000816 1.1e-08 63.9 47 61.7
GSVIVG01013467001 Vitis vinifera HOM05D000135 ORTHO05D000816 1.1e-08 63.9 44 65.9
Oeu035216.1 Olea europaea HOM05D000135 ORTHO05D000816 1.5e-08 63.5 49 63.3
PGR083G0560 Punica granatum HOM05D000135 ORTHO05D000816 1.5e-08 63.5 44 65.9
vmacro05943 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 1.5e-08 63.5 47 68.1
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 2.5e-08 62.8 48 54.2
Oeu058772.1 Olea europaea HOM05D000135 ORTHO05D000816 2.5e-08 62.8 54 61.1
QL02p016339 Quercus lobata HOM05D000135 ORTHO05D000816 2.5e-08 62.8 46 60.9
QL02p016421 Quercus lobata HOM05D000135 ORTHO05D000816 2.5e-08 62.8 47 59.6
vmacro05944 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 2.5e-08 62.8 47 68.1
Oeu035215.1 Olea europaea HOM05D000135 ORTHO05D000816 3.2e-08 62.4 47 63.8
QL02p016429 Quercus lobata HOM05D000135 ORTHO05D000816 3.2e-08 62.4 46 60.9
Sc07g0004160 Simmondsia chinensis HOM05D000135 ORTHO05D000816 3.2e-08 62.4 47 63.8
Dinv14818 Davidia involucrata HOM05D000135 ORTHO05D000816 4.2e-08 62.0 50 56.0
FvH4_5g26790 Fragaria vesca HOM05D000135 ORTHO05D000816 4.2e-08 62.0 44 61.4
FAN04G2622 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.2e-08 62.0 44 61.4
FAN08G1719 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.2e-08 62.0 44 61.4
FAN13G2467 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.2e-08 62.0 44 61.4
FAN18G1887 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.2e-08 62.0 44 61.4
Manes.05G113200 Manihot esculenta HOM05D000135 ORTHO05D000816 4.2e-08 62.0 45 60.0
SGA_v2.0_scaffold47G17571 Striga asiatica HOM05D000135 ORTHO05D000816 4.2e-08 62.0 49 59.2
CSS0033756 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000816 5.5e-08 61.6 44 68.2
Eucgr.F03632 Eucalyptus grandis HOM05D000135 ORTHO05D000816 5.5e-08 61.6 45 60.0
TAR629G1517 Trochodendron aralioides HOM05D000135 ORTHO05D000816 5.5e-08 61.6 48 62.5
RcHm_v2.0_Chr7g0217701 Rosa chinensis HOM05D000135 ORTHO05D000816 9.4e-08 60.8 44 59.1
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 9.4e-08 60.8 48 52.1
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 9.4e-08 60.8 44 59.1
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 9.4e-08 60.8 48 52.1
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 9.4e-08 60.8 44 59.1
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 9.4e-08 60.8 44 59.1
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 9.4e-08 60.8 48 52.1
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 9.4e-08 60.8 48 52.1
VMungo1383G0529 Vigna mungo HOM05D000135 ORTHO05D000816 9.4e-08 60.8 47 61.7
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.2e-07 60.5 44 56.8
Peaxi162Scf00098g00156 Petunia axillaris HOM05D000135 ORTHO05D000816 1.2e-07 60.5 47 53.2
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 2.1e-07 59.7 48 60.4
HanXRQChr15g0474941 Helianthus annuus HOM05D000135 ORTHO05D000816 3.6e-07 58.9 49 57.1
Nitab4.5_0000875g0030 Nicotiana tabacum HOM05D000135 ORTHO05D000816 3.6e-07 58.9 42 59.5
Nitab4.5_0002183g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000816 3.6e-07 58.9 42 59.5
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 3.6e-07 58.9 44 56.8
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 3.6e-07 58.9 42 57.1
QL03p054162 Quercus lobata HOM05D000135 ORTHO05D000816 3.6e-07 58.9 48 58.3
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.6e-07 58.9 44 54.5
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 4.7e-07 58.5 44 54.5
CiPaw.07G129800 Carya illinoinensis HOM05D000135 ORTHO05D000816 4.7e-07 58.5 43 58.1
Lj1g0014603 Lotus japonicus HOM05D000135 ORTHO05D000816 4.7e-07 58.5 46 63.0
Sed0012230 Sechium edule HOM05D000135 ORTHO05D000816 4.7e-07 58.5 47 61.7
Solyc06g073830.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 4.7e-07 58.5 44 54.5
Sopen06g030230 Solanum pennellii HOM05D000135 ORTHO05D000816 4.7e-07 58.5 44 54.5
PGSC0003DMG400005909 Solanum tuberosum HOM05D000135 ORTHO05D000816 4.7e-07 58.5 44 54.5
GSVIVG01008516001 Vitis vinifera HOM05D000135 ORTHO05D000816 4.7e-07 58.5 48 56.2
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 6.1e-07 58.2 48 60.4
MBI01_g09380_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 6.1e-07 58.2 43 60.5
MBI02_g10682_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 6.1e-07 58.2 43 60.5
Potri.002G001400 Populus trichocarpa HOM05D000135 ORTHO05D000816 6.1e-07 58.2 38 63.2
CAN.G742.5 Capsicum annuum HOM05D000135 ORTHO05D000816 8.0e-07 57.8 48 50.0
Cpa.g.sc171.33 Carica papaya HOM05D000135 ORTHO05D000816 8.0e-07 57.8 55 58.2
Nn4g22363 Nelumbo nucifera HOM05D000135 ORTHO05D000816 8.0e-07 57.8 43 65.1
Nn4g22368 Nelumbo nucifera HOM05D000135 ORTHO05D000816 8.0e-07 57.8 43 65.1
Haze_22895 Corylus avellana HOM05D000135 ORTHO05D000816 1.0e-06 57.4 43 55.8
Cpa.g.sc36.91 Carica papaya HOM05D000135 ORTHO05D000816 1.4e-06 57.0 43 60.5
Migut.F00079 Erythranthe guttata HOM05D016915 ORTHO05D000816 1.4e-06 57.0 43 60.5
Peaxi162Scf00259g00018 Petunia axillaris HOM05D000135 ORTHO05D000816 1.4e-06 57.0 42 57.1
Potri.005G259900 Populus trichocarpa HOM05D000135 ORTHO05D000816 1.4e-06 57.0 42 54.8
CsaV3_1G000650 Cucumis sativus L. HOM05D000135 ORTHO05D000816 1.8e-06 56.6 43 62.8
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 1.8e-06 56.6 48 47.9
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 1.8e-06 56.6 48 56.2
Actinidia38214 Actinidia chinensis HOM05D000135 ORTHO05D000816 2.3e-06 56.2 37 64.9
COL.COLO4_12261 Corchorus olitorius HOM05D000135 ORTHO05D000816 2.3e-06 56.2 43 58.1
MBI03_g33916_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 2.3e-06 56.2 42 59.5
Nn3g16507 Nelumbo nucifera HOM05D000135 ORTHO05D000816 2.3e-06 56.2 48 58.3
unitig_748.g7057 Utricularia gibba HOM05D000135 ORTHO05D000816 2.3e-06 56.2 53 54.7
GSVIVG01010378001 Vitis vinifera HOM05D000135 ORTHO05D000816 2.3e-06 56.2 42 59.5
Aqoxy5G00935 Aquilegia oxysepala HOM05D000135 ORTHO05D000816 3.0e-06 55.8 43 60.5
CANSAT25G2687 Cannabis sativa HOM05D000135 ORTHO05D000816 3.0e-06 55.8 48 56.2
CAN.G473.85 Capsicum annuum HOM05D000135 ORTHO05D000816 3.0e-06 55.8 48 58.3
Cfa014171 Carpinus fangiana HOM05D000135 ORTHO05D000816 3.0e-06 55.8 40 60.0
MELO3C026214.2 Cucumis melo HOM05D000135 ORTHO05D000816 3.0e-06 55.8 43 62.8
HanXRQChr09g0256101 Helianthus annuus HOM05D000135 ORTHO05D000816 3.0e-06 55.8 45 57.8
Peaxi162Scf00700g00017 Petunia axillaris HOM05D000135 ORTHO05D000816 3.0e-06 55.8 47 57.4
QL03p054203 Quercus lobata HOM05D000135 ORTHO05D000816 3.0e-06 55.8 48 56.2
TAR381G0615 Trochodendron aralioides HOM05D000135 ORTHO05D000816 3.0e-06 55.8 45 57.8
GSVIVG01010383001 Vitis vinifera HOM05D000135 ORTHO05D000816 3.0e-06 55.8 42 59.5
MELO3C032128.2 Cucumis melo HOM05D000135 ORTHO05D000816 4.0e-06 55.5 50 58.0
CsaV3_3G027200 Cucumis sativus L. HOM05D000135 ORTHO05D000816 4.0e-06 55.5 50 58.0
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 4.0e-06 55.5 43 60.5
Solyc02g094000.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 4.0e-06 55.5 48 56.2
PGSC0003DMG400020261 Solanum tuberosum HOM05D000135 ORTHO05D000816 4.0e-06 55.5 48 56.2
MBI01_g44779_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 5.2e-06 55.1 43 58.1
Sabra05G0201600 Salix brachista HOM05D000135 ORTHO05D000816 5.2e-06 55.1 42 54.8
Sc09g0007590 Simmondsia chinensis HOM05D000135 ORTHO05D000816 5.2e-06 55.1 45 57.8
DCAR_009849 Daucus carota HOM05D000135 ORTHO05D000816 6.7e-06 54.7 42 54.8
Lj2C97T3 Lonicera japonica HOM05D000135 ORTHO05D000816 6.7e-06 54.7 41 58.5
Nitab4.5_0007150g0060 Nicotiana tabacum HOM05D000135 ORTHO05D000816 6.7e-06 54.7 49 55.1
Sopen02g038650 Solanum pennellii HOM05D000135 ORTHO05D000816 6.7e-06 54.7 43 60.5
CAN.G742.23 Capsicum annuum HOM05D000135 ORTHO05D000816 8.8e-06 54.3 48 47.9
CiPaw.05G177300 Carya illinoinensis HOM05D000135 ORTHO05D000816 8.8e-06 54.3 44 54.5
CiPaw.06G007300 Carya illinoinensis HOM05D000135 ORTHO05D000816 8.8e-06 54.3 44 54.5


User provided reference genes

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