Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 6.1e-67 257.3 125 100.0
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 2.0e-57 225.7 125 85.6
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 1.2e-35 153.3 125 60.8
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 1.8e-26 122.9 125 50.4
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 2.3e-26 122.5 145 48.3
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 3.7e-24 115.2 133 44.4
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 4.1e-23 111.7 131 51.9
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 2.0e-22 109.4 134 45.5
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 6.0e-22 107.8 131 47.3
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 1.7e-21 106.3 111 49.5
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 3.9e-21 105.1 130 44.6
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 1.1e-20 103.6 132 43.9
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 2.5e-20 102.4 97 50.5
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 4.7e-19 98.2 101 48.5
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 2.3e-18 95.9 126 39.7
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 4.0e-18 95.1 99 47.5
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 9.8e-17 90.5 122 47.5
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 6.4e-16 87.8 125 40.0
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 8.3e-16 87.4 99 47.5
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 8.3e-16 87.4 122 45.1
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 9.2e-15 84.0 99 46.5
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 2.1e-14 82.8 127 41.7
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 3.5e-14 82.0 92 46.7
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 1.0e-13 80.5 130 39.2
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 2.3e-13 79.3 93 46.2
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 3.9e-13 78.6 86 46.5
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 1.9e-12 76.3 81 46.9
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 2.5e-12 75.9 140 36.4
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 2.5e-12 75.9 81 46.9
arahy.Tifrunner.gnm1.ann1.9K6AGR Arachis hypogaea HOM05D009134 ORTHO05D011284 3.3e-12 75.5 137 38.0
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 7.3e-12 74.3 113 40.7
Sabra07G0105900 Salix brachista HOM05D000578 ORTHO05D000422 7.3e-12 74.3 91 46.2
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 1.5e-09 66.6 78 48.7
Nn7g37605 Nelumbo nucifera HOM05D009134 ORTHO05D011284 2.9e-08 62.4 90 42.2
Sc07g0007160 Simmondsia chinensis HOM05D009134 ORTHO05D011284 7.1e-07 57.8 109 33.9
Oeu034450.1 Olea europaea HOM05D009134 ORTHO05D011284 4.6e-06 55.1 89 40.4


User provided reference genes

Program Settings