Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021317 Carpinus fangiana HOM05D000460 ORTHO05D124329 3.0e-99 365.2 181 100.0
Cfa013915 Carpinus fangiana HOM05D000460 ORTHO05D000333 4.0e-11 72.4 119 39.5
Haze_22600 Corylus avellana HOM05D000460 ORTHO05D000333 5.2e-11 72.0 119 39.5
Cfa014903 Carpinus fangiana HOM05D000433 ORTHO05D000443 2.2e-09 66.6 33 90.9
Haze_11567 Corylus avellana HOM05D000433 ORTHO05D000443 8.4e-09 64.7 33 87.9
Gohir.A05G257700 Gossypium hirsutum HOM05D000460 ORTHO05D000333 4.6e-07 58.9 119 31.1
Gorai.009G270800 Gossypium raimondii HOM05D000460 ORTHO05D000333 4.6e-07 58.9 119 31.1
Prupe.1G369800 Prunus persica HOM05D000460 ORTHO05D000333 4.6e-07 58.9 111 34.2
QL02p010869 Quercus lobata HOM05D000460 ORTHO05D000333 4.6e-07 58.9 119 33.6
Thecc.08G038600 Theobroma cacao HOM05D000460 ORTHO05D000333 7.8e-07 58.2 119 31.1
Cpa.g.sc140.32 Carica papaya HOM05D000460 ORTHO05D000333 1.0e-06 57.8 119 31.9
CiPaw.08G063800 Carya illinoinensis HOM05D000460 ORTHO05D000333 1.0e-06 57.8 111 34.2
Duzib093G2039 Durio zibethinus HOM05D000460 ORTHO05D000333 1.0e-06 57.8 119 31.1
Lalb_Chr14g0369721 Lupinus albus HOM05D000460 ORTHO05D000333 1.0e-06 57.8 119 31.1
Duzib151G0906 Durio zibethinus HOM05D000460 ORTHO05D000333 1.3e-06 57.4 119 30.3
MD08G1017000 Malus domestica HOM05D000460 ORTHO05D000333 1.3e-06 57.4 116 31.0
Gohir.A02G088500 Gossypium hirsutum HOM05D000460 ORTHO05D000333 1.7e-06 57.0 119 31.1
MD08G1016900 Malus domestica HOM05D000460 ORTHO05D000333 1.7e-06 57.0 111 31.5
THA.LOC104808725 Tarenaya hassleriana HOM05D000433 ORTHO05D000443 2.3e-06 56.6 32 75.0
FvH4_2g39130 Fragaria vesca HOM05D000460 ORTHO05D000333 3.0e-06 56.2 119 31.1
FvH4_2g39150 Fragaria vesca HOM05D000460 ORTHO05D000333 3.0e-06 56.2 119 31.1
FAN15G2466 Fragaria x ananassa HOM05D000460 ORTHO05D000333 3.0e-06 56.2 119 31.1
FAN20G0903 Fragaria x ananassa HOM05D000460 ORTHO05D000333 3.0e-06 56.2 119 31.1
FAN20G1961 Fragaria x ananassa HOM05D000460 ORTHO05D000333 3.0e-06 56.2 119 31.1
FAN27G0765 Fragaria x ananassa HOM05D000460 ORTHO05D000333 3.0e-06 56.2 119 31.1
Gohir.D05G191132 Gossypium hirsutum HOM05D000460 ORTHO05D000333 3.0e-06 56.2 121 33.1
Gorai.009G196400 Gossypium raimondii HOM05D000460 ORTHO05D000333 3.0e-06 56.2 121 33.1
MD15G1015900 Malus domestica HOM05D000460 ORTHO05D000333 3.0e-06 56.2 111 31.5
CiPaw.08G063700 Carya illinoinensis HOM05D000460 ORTHO05D000333 3.9e-06 55.8 112 33.0
Glyma.06G026300 Glycine max HOM05D000460 ORTHO05D000333 3.9e-06 55.8 119 31.1
CiPaw.08G063500 Carya illinoinensis HOM05D000460 ORTHO05D000333 5.1e-06 55.5 111 33.3
CiPaw.08G063600 Carya illinoinensis HOM05D000460 ORTHO05D000333 5.1e-06 55.5 111 33.3
Duzib041G0030 Durio zibethinus HOM05D000460 ORTHO05D000333 5.1e-06 55.5 119 30.3
Eucgr.F01844 Eucalyptus grandis HOM05D000460 ORTHO05D000333 5.1e-06 55.5 28 71.4
Gorai.005G111300 Gossypium raimondii HOM05D000460 ORTHO05D000333 5.1e-06 55.5 119 31.1
MD15G1016000 Malus domestica HOM05D000460 ORTHO05D000333 5.1e-06 55.5 111 31.5
MD16G1235500 Malus domestica HOM05D000433 ORTHO05D000443 5.1e-06 55.5 32 78.1
arahy.Tifrunner.gnm1.ann1.W1VILL Arachis hypogaea HOM05D000460 ORTHO05D000333 8.7e-06 54.7 119 32.8
MD13G1087700 Malus domestica HOM05D000460 ORTHO05D000333 8.7e-06 54.7 111 30.6


User provided reference genes

Program Settings