Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021302 Carpinus fangiana HOM05D026864 ORTHO05D000116 0.0e+00 1757.3 1060 100.0
Cfa022934 Carpinus fangiana HOM05D026864 ORTHO05D000116 1.8e-58 232.3 377 44.6
Cfa010421 Carpinus fangiana HOM05D026864 ORTHO05D000116 5.5e-44 184.1 122 71.3
Rhsim08G0029200 Rhododendron simsii HOM05D009413 ORTHO05D000116 2.0e-22 112.5 170 40.0
MBI03_g00028_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.4e-15 89.7 153 39.2
Ciclev10003975m.g Citrus clementina HOM05D009413 ORTHO05D000116 2.1e-14 85.9 174 29.9
Oeu006317.1 Olea europaea HOM05D002774 ORTHO05D000116 2.7e-14 85.5 176 31.8
CSS0040956 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D000116 3.5e-14 85.1 182 29.7
Haze_22203 Corylus avellana HOM05D022083 ORTHO05D000116 3.5e-14 85.1 149 33.6
Oeu049204.1 Olea europaea HOM05D002774 ORTHO05D000116 4.6e-14 84.7 125 35.2
Haze_01195 Corylus avellana HOM05D006926 ORTHO05D008863 1.0e-13 83.6 134 35.1
QL06p047151 Quercus lobata HOM05D009413 ORTHO05D000116 1.7e-13 82.8 189 30.7
QL10p025857 Quercus lobata HOM05D009413 ORTHO05D000116 1.7e-13 82.8 195 29.2
QL10p046964 Quercus lobata HOM05D009413 ORTHO05D000116 2.3e-13 82.4 189 30.2
Atru.chr6.385 Acer truncatum HOM05D000706 ORTHO05D000116 3.9e-13 81.6 169 33.1
Atru.chr6.434_Atru.chr6.435 Acer truncatum HOM05D000706 ORTHO05D001554 3.9e-13 81.6 169 33.1
Ciclev10017562m.g Citrus clementina HOM05D009413 ORTHO05D000116 6.6e-13 80.9 171 28.1
Ciclev10019154m.g Citrus clementina HOM05D009413 ORTHO05D000116 6.6e-13 80.9 171 28.1
Oeu034663.1 Olea europaea HOM05D002774 ORTHO05D000116 1.1e-12 80.1 122 34.4
Oeu051288.1 Olea europaea HOM05D002774 ORTHO05D000116 1.1e-12 80.1 176 29.5
Oeu063908.1 Olea europaea HOM05D002774 ORTHO05D000116 1.1e-12 80.1 167 28.7
QL04p004305 Quercus lobata HOM05D000311 ORTHO05D000183 1.1e-12 80.1 242 26.9
QL04p042823 Quercus lobata HOM05D009413 ORTHO05D000116 1.9e-12 79.3 186 29.6
MBI12_g04512_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 2.5e-12 79.0 112 39.3
Oeu052701.1 Olea europaea HOM05D002774 ORTHO05D000116 3.3e-12 78.6 123 35.0
QL02p091007 Quercus lobata HOM05D009413 ORTHO05D000116 3.3e-12 78.6 185 28.1
Oeu015366.1 Olea europaea HOM05D002774 ORTHO05D000116 4.3e-12 78.2 110 38.2
Haze_12632 Corylus avellana HOM05D000001 ORTHO05D000003 9.5e-12 77.0 135 34.8
Oeu019335.1 Olea europaea HOM05D002774 ORTHO05D000116 9.5e-12 77.0 127 31.5
Oeu037847.1 Olea europaea HOM05D002774 ORTHO05D000116 1.2e-11 76.6 115 37.4
QL11p042019 Quercus lobata HOM05D003372 ORTHO05D000116 1.2e-11 76.6 242 26.4
QL03p072853 Quercus lobata HOM05D009413 ORTHO05D000116 1.6e-11 76.3 143 35.7
QL03p072862 Quercus lobata HOM05D009413 ORTHO05D000116 1.6e-11 76.3 143 35.7
QL04p089085 Quercus lobata HOM05D009413 ORTHO05D000116 1.6e-11 76.3 143 35.7
QL05p071009 Quercus lobata HOM05D013248 ORTHO05D000116 1.6e-11 76.3 204 29.4
Oeu031116.1 Olea europaea HOM05D002774 ORTHO05D000116 4.7e-11 74.7 151 29.8
Oeu013437.1 Olea europaea HOM05D000396 ORTHO05D007733 8.1e-11 73.9 170 28.2
Oeu007210.1 Olea europaea HOM05D002774 ORTHO05D000116 4.0e-10 71.6 143 32.2
MBI16_g34672_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 5.2e-10 71.2 166 30.1
Oeu048175.1 Olea europaea HOM05D002774 ORTHO05D000116 5.2e-10 71.2 111 35.1
Os02g0307900 Oryza sativa ssp. japonica HOM05D000396 ORTHO05D000116 5.2e-10 71.2 205 27.8
QL93p1902_0571 Quercus lobata HOM05D009413 ORTHO05D000116 6.8e-10 70.9 143 35.0
Oeu022696.1 Olea europaea HOM05D002774 ORTHO05D000116 8.9e-10 70.5 119 34.5
QL05p031643 Quercus lobata HOM05D009413 ORTHO05D000116 8.9e-10 70.5 172 29.1
QL10p041460 Quercus lobata HOM05D009413 ORTHO05D000116 8.9e-10 70.5 172 29.1
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 8.9e-10 70.5 143 33.6
QL11p005301 Quercus lobata HOM05D009413 ORTHO05D000116 8.9e-10 70.5 172 29.1
CSS0037614 Camellia sinensis var. sinensis HOM05D010739 ORTHO05D012209 1.2e-09 70.1 162 28.4
Oeu010454.1 Olea europaea HOM05D002774 ORTHO05D000116 1.2e-09 70.1 121 33.9
MBI03_g14059_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 1.5e-09 69.7 156 30.8
Oeu022639.1 Olea europaea HOM05D001961 ORTHO05D002286 2.0e-09 69.3 125 32.0
Oeu033039.1 Olea europaea HOM05D002774 ORTHO05D000116 2.0e-09 69.3 121 33.1
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 2.6e-09 68.9 160 30.0
Haze_23789 Corylus avellana HOM05D022083 ORTHO05D000116 2.6e-09 68.9 111 36.0
CSS0015805 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 4.4e-09 68.2 124 30.6
MBI11_g42047_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 4.4e-09 68.2 160 30.0
Oeu034398.1 Olea europaea HOM05D002774 ORTHO05D000116 9.9e-09 67.0 177 27.1
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 1.3e-08 66.6 184 23.4
Oeu021590.1 Olea europaea HOM05D002774 ORTHO05D000116 1.3e-08 66.6 124 33.1
MBI16_g25249_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.7e-08 66.2 98 37.8
Os06g0165300 Oryza sativa ssp. japonica HOM05D004287 ORTHO05D000116 1.7e-08 66.2 177 24.3
Oeu005042.1 Olea europaea HOM05D002774 ORTHO05D000116 2.2e-08 65.9 133 31.6
Gohir.A12G182300 Gossypium hirsutum HOM05D004287 ORTHO05D004569 2.9e-08 65.5 265 24.5
MBI10_g21035_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 2.9e-08 65.5 130 30.8
Oeu028351.1 Olea europaea HOM05D002774 ORTHO05D000116 2.9e-08 65.5 106 32.1
Zm00001eb375230 Zea mays HOM05D004287 ORTHO05D000116 2.9e-08 65.5 150 28.7
MBI04_g39792_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 3.8e-08 65.1 149 27.5
MBI08_g10609_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 3.8e-08 65.1 89 38.2
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 4.9e-08 64.7 193 23.3
Gohir.D12G185200 Gossypium hirsutum HOM05D004287 ORTHO05D004569 4.9e-08 64.7 187 25.7
Gorai.008G198600 Gossypium raimondii HOM05D004287 ORTHO05D004569 4.9e-08 64.7 187 25.7
Oeu004245.1 Olea europaea HOM05D002774 ORTHO05D000116 4.9e-08 64.7 80 40.0
Oeu010409.1 Olea europaea HOM05D000396 ORTHO05D000116 4.9e-08 64.7 107 34.6
MBI08_g10608_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 6.4e-08 64.3 150 30.0
Oeu043654.1 Olea europaea HOM05D002774 ORTHO05D000116 6.4e-08 64.3 113 34.5
CSS0043108 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 8.4e-08 63.9 106 31.1
MBI18_g02449_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 8.4e-08 63.9 113 35.4
Os06g0174800 Oryza sativa ssp. japonica HOM05D004287 ORTHO05D000116 8.4e-08 63.9 146 31.5
Oeu010459.1 Olea europaea HOM05D002774 ORTHO05D000116 1.1e-07 63.5 79 38.0
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 1.4e-07 63.2 116 32.8
MBI01_g10137_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.4e-07 63.2 125 35.2
MBI05_g14943_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.4e-07 63.2 67 47.8
MBI09_g45478_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 1.4e-07 63.2 132 29.5
Oeu040951.2 Olea europaea HOM05D002774 ORTHO05D000116 1.4e-07 63.2 79 38.0
Oeu002538.1 Olea europaea HOM05D002774 ORTHO05D000116 3.2e-07 62.0 79 38.0
Oeu047950.1 Olea europaea HOM05D000396 ORTHO05D000116 4.1e-07 61.6 151 29.8
Oeu022668.1 Olea europaea HOM05D002774 ORTHO05D000116 5.4e-07 61.2 105 29.5
Oeu026285.1 Olea europaea HOM05D002774 ORTHO05D000116 5.4e-07 61.2 71 42.3
Oeu026878.1 Olea europaea HOM05D002774 ORTHO05D000116 5.4e-07 61.2 105 34.3
Haze_13571 Corylus avellana HOM05D026874 ORTHO05D000116 7.1e-07 60.8 125 34.4
Haze_18454 Corylus avellana HOM05D053650 ORTHO05D000116 7.1e-07 60.8 82 41.5
Oeu040082.1 Olea europaea HOM05D000396 ORTHO05D000116 7.1e-07 60.8 144 29.2
Oeu055833.1 Olea europaea HOM05D002774 ORTHO05D000116 7.1e-07 60.8 78 43.6
QL02p021994 Quercus lobata HOM05D009413 ORTHO05D000116 7.1e-07 60.8 141 27.7
TWI14G0077 Tripterygium wilfordii HOM05D015010 ORTHO05D000116 7.1e-07 60.8 173 23.7
Oeu049672.1 Olea europaea HOM05D000396 ORTHO05D000116 9.2e-07 60.5 107 30.8
Oeu052961.1 Olea europaea HOM05D002774 ORTHO05D000116 1.2e-06 60.1 99 33.3
Oeu013359.1 Olea europaea HOM05D002774 ORTHO05D000116 1.6e-06 59.7 99 34.3
Oeu024664.1 Olea europaea HOM05D002774 ORTHO05D000116 1.6e-06 59.7 79 38.0
MBI18_g06091_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 2.1e-06 59.3 88 38.6
Oeu011294.1 Olea europaea HOM05D002774 ORTHO05D000116 2.1e-06 59.3 86 37.2
Oeu013952.1 Olea europaea HOM05D002774 ORTHO05D000116 2.1e-06 59.3 112 30.4
Phvul.008G104250 Phaseolus vulgaris HOM05D004090 ORTHO05D002871 2.1e-06 59.3 182 29.7
GSVIVG01021922001 Vitis vinifera HOM05D001405 ORTHO05D001264 2.1e-06 59.3 143 30.8
CANSAT11G1723 Cannabis sativa HOM05D017246 ORTHO05D022149 2.7e-06 58.9 156 26.9
MBI12_g09290_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 2.7e-06 58.9 88 40.9
MBI18_g24219_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 2.7e-06 58.9 71 45.1
Oeu008240.2 Olea europaea HOM05D002774 ORTHO05D000116 2.7e-06 58.9 70 41.4
QL08p037960 Quercus lobata HOM05D000170 ORTHO05D000154 2.7e-06 58.9 185 28.1
Oeu036039.1 Olea europaea HOM05D002774 ORTHO05D000116 3.5e-06 58.5 71 39.4
Oeu045425.1 Olea europaea HOM05D000784 ORTHO05D000116 3.5e-06 58.5 101 30.7
CANSAT80G0769 Cannabis sativa HOM05D017246 ORTHO05D022149 4.6e-06 58.2 155 27.7


User provided reference genes

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