Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 3.5e-209 731.9 513 100.0
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 9.8e-196 687.2 513 93.0
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 2.1e-137 493.4 503 76.9
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 8.4e-123 444.9 505 64.6
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 6.0e-121 438.7 540 67.0
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 2.5e-114 416.8 497 66.6
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 4.3e-111 406.0 513 62.2
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 6.3e-110 402.1 539 57.9
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 2.4e-109 400.2 513 53.2
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 4.1e-109 399.4 502 55.6
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 9.0e-109 398.3 490 63.1
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 2.0e-108 397.1 513 59.3
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.5e-108 396.0 543 51.9
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 1.3e-107 394.4 509 63.9
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 1.7e-107 394.0 513 57.3
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 6.5e-107 392.1 511 59.5
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 8.5e-107 391.7 528 48.9
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 8.5e-107 391.7 532 53.4
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.1e-106 391.3 508 65.7
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 1.4e-106 391.0 523 50.1
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 1.9e-106 390.6 373 65.7
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.6e-105 386.3 532 43.0
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 1.5e-103 380.9 503 61.8
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 1.5e-100 370.9 533 50.5
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 1.5e-100 370.9 510 64.5
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 2.2e-99 367.1 504 59.3
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 1.1e-98 364.8 505 55.8
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 1.4e-98 364.4 508 57.3
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 2.2e-94 350.5 497 60.6
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.4e-93 347.8 509 57.2
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 7.0e-93 345.5 499 58.5
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 9.1e-93 345.1 511 53.0
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 1.0e-91 341.7 497 59.0
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 1.1e-90 338.2 499 57.5
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 1.5e-90 337.8 496 58.9
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 4.2e-90 336.3 498 55.6
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 2.1e-89 334.0 469 60.3
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 8.0e-89 332.0 518 51.0
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 3.0e-88 330.1 497 57.5
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 3.3e-87 326.6 492 50.4
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 3.3e-87 326.6 523 56.8
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 1.7e-86 324.3 504 57.1
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 6.3e-86 322.4 501 54.5
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 8.2e-86 322.0 513 60.6
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 1.4e-85 321.2 513 59.8
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 4.1e-85 319.7 539 51.6
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.6e-84 317.8 507 54.4
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 2.0e-84 317.4 499 56.3
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 4.5e-84 316.2 504 53.0
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 4.5e-84 316.2 507 47.5
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 4.5e-84 316.2 499 54.7
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 8.5e-83 312.0 498 59.4
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 2.5e-82 310.5 504 60.1
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 7.2e-82 308.9 507 54.0
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 8.0e-81 305.4 503 59.2
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 2.3e-80 303.9 512 59.8
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 5.2e-80 302.8 518 58.1
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 5.7e-79 299.3 493 57.2
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 7.0e-77 292.4 502 58.6
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 9.1e-77 292.0 506 59.1
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 2.2e-75 287.3 507 53.5
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 1.5e-74 284.6 502 47.6
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 3.2e-74 283.5 461 58.6
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 2.1e-73 280.8 509 54.2
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.8e-72 277.7 486 53.7
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 4.0e-72 276.6 498 53.4
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 1.3e-70 271.6 494 48.4
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 1.7e-70 271.2 508 50.8
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 2.4e-69 267.3 502 56.0
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 2.3e-67 260.8 367 54.5
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.2e-65 255.0 521 46.4
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 4.7e-65 253.1 494 52.4
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 1.8e-64 251.1 474 48.9
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 8.9e-64 248.8 279 62.7
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 7.5e-63 245.7 437 56.1
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 1.3e-62 245.0 506 53.2
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 2.2e-62 244.2 513 47.6
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 2.2e-62 244.2 513 47.6
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 4.9e-62 243.0 507 53.8
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 1.6e-60 238.0 506 47.2
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 4.6e-60 236.5 518 47.5
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 4.6e-60 236.5 518 47.5
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 4.6e-60 236.5 508 48.2
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 5.6e-58 229.6 518 47.1
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 2.1e-57 227.6 495 55.8
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 7.8e-52 209.1 308 52.9
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 2.5e-50 204.1 513 39.2
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 2.5e-50 204.1 513 39.2
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.1e-48 198.7 324 39.8
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 4.0e-48 196.8 526 46.0
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 9.8e-47 192.2 502 42.2
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 6.0e-44 183.0 247 68.8
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 3.9e-43 180.3 503 48.3
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 3.9e-43 180.3 531 46.3
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 5.1e-43 179.9 506 48.8
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.9e-42 177.9 503 42.9
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 1.1e-40 172.2 362 45.9
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 1.8e-40 171.4 436 29.4
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 1.2e-39 168.7 512 44.9
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 1.4e-37 161.8 497 46.7
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 4.6e-36 156.8 497 39.4
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 6.6e-35 152.9 507 46.0
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 2.8e-33 147.5 221 51.6
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 2.9e-30 137.5 374 41.7
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 6.4e-30 136.3 152 53.3
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 7.8e-28 129.4 332 43.4
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 1.1e-24 119.0 445 37.5
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 4.5e-23 113.6 204 56.4
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 1.1e-08 65.9 177 31.6
Medtr0050s0150 Medicago truncatula HOM05D006572 ORTHO05D008181 1.3e-06 58.9 117 41.9
Cpa.g.sc79.39 Carica papaya HOM05D006572 ORTHO05D008181 1.7e-06 58.5 68 48.5


User provided reference genes

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