Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021206 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.9e-92 342.4 168 100.0
Cfa012649 Carpinus fangiana HOM05D011273 ORTHO05D013289 4.4e-89 331.3 168 97.0
Cfa012336 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.6e-86 322.8 168 95.2
Cfa018419 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.4e-81 305.1 168 89.3
Cfa008536 Carpinus fangiana HOM05D011273 ORTHO05D013289 6.7e-69 264.2 169 73.4
Cfa010712 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.5e-68 262.3 169 73.4
Cfa019640 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.6e-67 259.6 168 77.4
Cfa008487 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.7e-64 249.6 169 70.4
Cfa005445 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.5e-55 219.2 175 62.9
Cfa002369 Carpinus fangiana HOM05D011273 ORTHO05D013289 5.1e-45 184.9 168 60.1
Cfa010107 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.8e-35 152.5 166 45.8
Cfa022968 Carpinus fangiana HOM05D011273 ORTHO05D013289 6.3e-35 151.4 166 45.8
Cfa012337 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.2e-27 126.3 66 97.0
Cfa002120 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.6e-17 93.6 118 39.8
Haze_20224 Corylus avellana HOM05D000484 ORTHO05D000346 2.0e-12 76.6 154 29.9
Cfa005677 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.8e-10 70.1 94 39.4
DCAR_028160 Daucus carota HOM05D001383 ORTHO05D000309 9.2e-10 67.8 147 29.3
Hma1.2p1_0230F.1_g097240 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.7e-09 66.2 76 38.2
DCAR_023907 Daucus carota HOM05D011273 ORTHO05D000309 3.5e-09 65.9 145 29.0
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 3.0e-08 62.8 84 39.3
Nitab4.5_0000115g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 5.0e-08 62.0 71 36.6
Dinv09832 Davidia involucrata HOM05D001383 ORTHO05D000309 1.1e-07 60.8 69 40.6
Hma1.2p1_0012F.1_g007535 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.1e-07 60.8 86 33.7
Nitab4.5_0008271g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.9e-07 60.1 80 33.8
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 3.3e-07 59.3 72 37.5
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 3.3e-07 59.3 60 41.7
Glyma.01G130300 Glycine max HOM05D001383 ORTHO05D000309 4.3e-07 58.9 88 33.0
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 4.3e-07 58.9 72 36.1
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 4.3e-07 58.9 107 35.5
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.6e-07 58.5 85 35.3
Nitab4.5_0000216g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 5.6e-07 58.5 69 34.8
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.6e-07 58.5 73 35.6
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.6e-07 58.5 73 35.6
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 5.6e-07 58.5 71 35.2
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 5.6e-07 58.5 101 27.7
Hma1.2p1_0257F.1_g103490 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.3e-07 58.2 72 38.9
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 7.3e-07 58.2 78 34.6
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 7.3e-07 58.2 90 35.6
SGA_v2.0_scaffold15G07207 Striga asiatica HOM05D001383 ORTHO05D000309 7.3e-07 58.2 105 27.6
DCAR_001034 Daucus carota HOM05D001383 ORTHO05D000309 9.5e-07 57.8 141 29.1
VMungo1298G0001 Vigna mungo HOM05D008573 ORTHO05D009911 9.5e-07 57.8 90 31.1
DCAR_011158 Daucus carota HOM05D001383 ORTHO05D000309 1.2e-06 57.4 136 27.2
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 1.2e-06 57.4 90 34.4
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.6e-06 57.0 106 36.8
AUR62036681 Chenopodium quinoa HOM05D008388 ORTHO05D000309 1.6e-06 57.0 138 29.0
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 57.0 78 35.9
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 1.6e-06 57.0 79 30.4
SGA_v2.0_scaffold22G09703 Striga asiatica HOM05D001383 ORTHO05D000309 1.6e-06 57.0 106 30.2
VMungo0647G2310 Vigna mungo HOM05D008589 ORTHO05D010715 1.6e-06 57.0 102 29.4
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 2.1e-06 56.6 79 30.4
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 2.1e-06 56.6 71 31.0
Medtr8g466420 Medicago truncatula HOM05D009039 ORTHO05D011159 2.1e-06 56.6 80 37.5
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.1e-06 56.6 73 32.9
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.1e-06 56.6 73 32.9
PGSC0003DMG400041825 Solanum tuberosum HOM05D009408 ORTHO05D000309 2.1e-06 56.6 130 26.9
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.8e-06 56.2 57 45.6
Medtr1g070405 Medicago truncatula HOM05D001383 ORTHO05D000309 2.8e-06 56.2 81 30.9
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.8e-06 56.2 73 34.2
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 2.8e-06 56.2 56 39.3
CAN.G1005.18 Capsicum annuum HOM05D011038 ORTHO05D004172 3.6e-06 55.8 73 41.1
PGSC0003DMG400045988 Solanum tuberosum HOM05D001883 ORTHO05D037696 3.6e-06 55.8 77 33.8
SGA_v2.0_scaffold167G38437 Striga asiatica HOM05D001383 ORTHO05D000309 3.6e-06 55.8 62 35.5
Ah.01g011000 Amaranthus hybridus HOM05D008388 ORTHO05D000309 4.7e-06 55.5 109 33.0
AUR62006272 Chenopodium quinoa HOM05D008388 ORTHO05D000309 4.7e-06 55.5 144 30.6
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.7e-06 55.5 71 36.6
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.7e-06 55.5 70 32.9
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.2e-06 55.1 65 40.0
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.2e-06 55.1 61 37.7
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.2e-06 55.1 57 43.9
Peaxi162Scf00013g01517 Petunia axillaris HOM05D001883 ORTHO05D002184 6.2e-06 55.1 74 37.8
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 6.2e-06 55.1 78 33.3
SGA_v2.0_scaffold43G16251 Striga asiatica HOM05D001383 ORTHO05D000309 6.2e-06 55.1 177 23.7
DCAR_001137 Daucus carota HOM05D001383 ORTHO05D000309 8.0e-06 54.7 138 26.8
HanXRQChr03g0077471 Helianthus annuus HOM05D001383 ORTHO05D000309 8.0e-06 54.7 90 32.2
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.0e-06 54.7 61 37.7
QL11p007191 Quercus lobata HOM05D000005 ORTHO05D000012 8.0e-06 54.7 69 34.8
SGA_v2.0_scaffold157G37340 Striga asiatica HOM05D001383 ORTHO05D000309 8.0e-06 54.7 106 29.2
VMungo1215G1066 Vigna mungo HOM05D008573 ORTHO05D009911 8.0e-06 54.7 88 35.2


User provided reference genes

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