Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 2.3e-81 305.4 148 100.0
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 1.3e-71 273.1 148 91.2
Cfa007508 Carpinus fangiana HOM05D008333 ORTHO05D010371 2.7e-45 185.7 146 63.7
QL02p080535 Quercus lobata HOM05D008333 ORTHO05D010371 2.1e-42 176.0 141 62.4
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 8.6e-36 154.1 130 57.7
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 7.8e-29 131.0 133 47.4
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 1.9e-27 126.3 127 47.2
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 1.3e-23 113.6 141 41.1
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 1.3e-23 113.6 115 45.2
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 2.9e-23 112.5 115 45.2
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 2.9e-23 112.5 115 45.2
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 4.9e-23 111.7 140 40.7
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 6.4e-23 111.3 143 39.2
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 3.2e-22 109.0 115 43.5
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 3.2e-22 109.0 115 43.5
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 5.4e-22 108.2 115 42.6
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 1.2e-21 107.1 133 39.1
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 4.6e-21 105.1 134 40.3
VMungo0464G0738 Vigna mungo HOM05D008333 ORTHO05D010371 4.6e-21 105.1 119 42.9
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 7.8e-21 104.4 135 40.7
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 3.9e-20 102.1 106 42.5
TPR.G7262 Trifolium pratense HOM05D008333 ORTHO05D010371 3.9e-20 102.1 141 40.4
Phvul.004G025900 Phaseolus vulgaris HOM05D008333 ORTHO05D010371 1.9e-19 99.8 117 41.0
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 1.9e-19 99.8 104 44.2
Eucgr.I01914 Eucalyptus grandis HOM05D008333 ORTHO05D010371 9.5e-19 97.4 108 43.5
Eucgr.L02760 Eucalyptus grandis HOM05D008333 ORTHO05D010371 2.1e-18 96.3 108 42.6
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 2.8e-18 95.9 134 36.6
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 2.8e-18 95.9 104 41.3
Eucgr.I01916 Eucalyptus grandis HOM05D008333 ORTHO05D010371 4.7e-18 95.1 107 42.1
CSS0029447 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 8.9e-17 90.9 142 33.8
CSS0048142 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 8.9e-17 90.9 142 33.8
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 3.4e-16 89.0 111 38.7
Rhsim08G0065700 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.8e-16 88.2 118 39.0
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 7.5e-16 87.8 118 39.0
Rhsim08G0065300 Rhododendron simsii HOM05D008333 ORTHO05D010371 7.5e-16 87.8 118 39.8
Gorai.007G297900 Gossypium raimondii HOM05D008333 ORTHO05D010371 9.9e-16 87.4 110 39.1
Rhsim08G0065500 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.2e-15 86.3 117 40.2
Rhsim08G0065800 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.9e-15 85.9 146 37.7
Rhsim08G0066000 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.9e-15 85.9 115 41.7
Rhsim08G0065900 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.7e-15 85.5 117 40.2
Gohir.D11G275775 Gossypium hirsutum HOM05D008333 ORTHO05D010371 6.4e-15 84.7 107 39.3
Actinidia38746 Actinidia chinensis HOM05D008333 ORTHO05D010371 1.1e-14 84.0 134 34.3
Gohir.D09G020550 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.1e-14 84.0 80 46.2
Rhsim08G0065400 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.1e-14 84.0 140 37.9
Rhsim08G0065600 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.2e-14 82.4 117 39.3
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 3.2e-14 82.4 126 38.1
Rhsim08G0065000 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.4e-14 81.6 115 40.0
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 5.4e-14 81.6 135 37.0
Rhsim08G0065200 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.2e-13 80.5 113 39.8
PGSC0003DMG400016257 Solanum tuberosum HOM05D008333 ORTHO05D010371 4.6e-13 78.6 110 36.4
CSS0005469 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 1.0e-12 77.4 135 34.8
TAR371G0090 Trochodendron aralioides HOM05D008333 ORTHO05D010371 6.6e-12 74.7 105 38.1
Gohir.A11G265601 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.5e-11 73.6 87 41.4
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 1.9e-11 73.2 131 34.4
Nn3g17126 Nelumbo nucifera HOM05D008333 ORTHO05D010371 1.6e-10 70.1 111 37.8
FAN02G4458 Fragaria x ananassa HOM05D008333 ORTHO05D010371 8.1e-10 67.8 85 40.0
VMungo0464G0892 Vigna mungo HOM05D036391 ORTHO05D035925 1.1e-09 67.4 128 32.0
CSS0007512 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 1.8e-09 66.6 104 36.5
Sopen04g006510 Solanum pennellii HOM05D008333 ORTHO05D010371 6.8e-09 64.7 105 31.4
Glyma.13G065300 Glycine max HOM05D036391 ORTHO05D035925 7.6e-08 61.2 118 32.2
Gorai.006G024300 Gossypium raimondii HOM05D008333 ORTHO05D010371 2.9e-07 59.3 71 33.8
Eucgr.L03696 Eucalyptus grandis HOM05D008333 ORTHO05D010371 3.8e-07 58.9 74 35.1
MBI18_g01155_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 9.2e-06 54.3 119 30.3


User provided reference genes

Program Settings