Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021066 Carpinus fangiana HOM05D001324 ORTHO05D125749 1.8e-201 705.7 344 100.0
Lj4g0027468 Lotus japonicus HOM05D001324 ORTHO05D001220 1.6e-13 81.3 362 22.9
Ca_22459_v3 Cicer arietinum L. HOM05D001324 ORTHO05D001220 3.7e-13 80.1 379 23.0
Glyma.16G108900 Glycine max HOM05D001324 ORTHO05D001220 3.1e-12 77.0 362 22.1
Lj2g0020750 Lotus japonicus HOM05D001324 ORTHO05D001220 3.1e-12 77.0 374 21.9
Medtr5g025650 Medicago truncatula HOM05D001324 ORTHO05D001220 5.3e-12 76.3 386 22.5
Lalb_Chr05g0229251 Lupinus albus HOM05D001324 ORTHO05D001220 1.5e-11 74.7 365 22.2
Ca_25051_v3 Cicer arietinum L. HOM05D001324 ORTHO05D001220 2.0e-11 74.3 369 21.4
Glyma.09G218100 Glycine max HOM05D001324 ORTHO05D001220 2.0e-11 74.3 377 22.3
Pp3c2_4310 Physcomitrium patens HOM05D001324 ORTHO05D001220 2.6e-11 73.9 358 24.9
TPR.G8983 Trifolium pratense HOM05D001324 ORTHO05D001220 2.6e-11 73.9 386 22.0
Manes.15G184700 Manihot esculenta HOM05D001324 ORTHO05D001220 4.5e-11 73.2 385 22.6
CsaV3_4G014900 Cucumis sativus L. HOM05D001324 ORTHO05D001220 5.8e-11 72.8 362 21.8
Glyma.16G076300 Glycine max HOM05D001324 ORTHO05D001220 5.8e-11 72.8 362 22.1
COL.COLO4_16744 Corchorus olitorius HOM05D001324 ORTHO05D001220 2.2e-10 70.9 367 22.9
MELO3C010528.2 Cucumis melo HOM05D001324 ORTHO05D001220 2.2e-10 70.9 362 21.5
ECA233G2798 Erigeron canadensis HOM05D001324 ORTHO05D001220 2.9e-10 70.5 361 23.3
Psat3g097880 Pisum sativum HOM05D001324 ORTHO05D001220 2.9e-10 70.5 359 23.1
Aqoxy2G03477 Aquilegia oxysepala HOM05D001324 ORTHO05D001220 4.9e-10 69.7 363 22.9
AL7G34780 Arabidopsis lyrata HOM05D001324 ORTHO05D001220 6.5e-10 69.3 361 23.5
arahy.Tifrunner.gnm1.ann1.Z1RXDB Arachis hypogaea HOM05D001324 ORTHO05D001220 6.5e-10 69.3 385 21.6
ClCG11G016140 Citrullus lanatus HOM05D001324 ORTHO05D001220 8.4e-10 68.9 353 23.5
Lalb_Chr16g0380451 Lupinus albus HOM05D001324 ORTHO05D001220 8.4e-10 68.9 386 21.2
Medtr8g072210 Medicago truncatula HOM05D001324 ORTHO05D001220 8.4e-10 68.9 363 22.0
Aa31LG2G21800 Aethionema arabicum HOM05D001324 ORTHO05D001220 1.1e-09 68.6 361 23.8
Sed0000449 Sechium edule HOM05D001324 ORTHO05D001220 1.1e-09 68.6 361 21.6
AT4G19380 Arabidopsis thaliana HOM05D001324 ORTHO05D001220 1.4e-09 68.2 344 23.8
Solyc08g075240.3 Solanum lycopersicum HOM05D001324 ORTHO05D001220 1.4e-09 68.2 370 21.4
VMungo1215G2629 Vigna mungo HOM05D001324 ORTHO05D001220 1.4e-09 68.2 380 22.9
CARHR226170 Cardamine hirsuta HOM05D001324 ORTHO05D001220 1.9e-09 67.8 355 23.1
CiPaw.11G073900 Carya illinoinensis HOM05D001324 ORTHO05D001220 1.9e-09 67.8 374 22.5
Sopen08g023840 Solanum pennellii HOM05D001324 ORTHO05D001220 1.9e-09 67.8 370 22.4
CAN.G998.3 Capsicum annuum HOM05D001324 ORTHO05D001220 3.2e-09 67.0 359 22.8
CAN.G998.4 Capsicum annuum HOM05D001324 ORTHO05D001220 3.2e-09 67.0 359 22.8
Sp7g17990 Schrenkiella parvula HOM05D001324 ORTHO05D001220 3.2e-09 67.0 345 23.8
BcaNung03068 Brassica carinata HOM05D001324 ORTHO05D001220 4.2e-09 66.6 344 22.7
C07p50360 Brassica napus HOM05D001324 ORTHO05D001220 4.2e-09 66.6 345 22.9
BolC7t45537H Brassica oleracea HOM05D001324 ORTHO05D001220 4.2e-09 66.6 345 22.9
Aqoxy6G02088 Aquilegia oxysepala HOM05D001324 ORTHO05D001220 5.5e-09 66.2 359 22.8
Carub.0007s2185 Capsella rubella HOM05D001324 ORTHO05D001220 5.5e-09 66.2 346 22.8
Lj8C362T1 Lonicera japonica HOM05D001324 ORTHO05D001220 5.5e-09 66.2 393 21.6
CiPaw.12G055700 Carya illinoinensis HOM05D001324 ORTHO05D001220 7.1e-09 65.9 364 22.3
Aa31LG6G1980 Aethionema arabicum HOM05D001324 ORTHO05D001220 2.1e-08 64.3 359 23.4
Ciclev10011111m.g Citrus clementina HOM05D001324 ORTHO05D001220 2.1e-08 64.3 384 20.8
QL12p003534 Quercus lobata HOM05D001324 ORTHO05D001220 2.1e-08 64.3 363 23.1
BcaNung01783 Brassica carinata HOM05D001324 ORTHO05D001220 2.7e-08 63.9 344 22.1
Mapoly0065s0052 Marchantia polymorpha HOM05D001324 ORTHO05D001220 2.7e-08 63.9 369 23.0
Duzib205G0933 Durio zibethinus HOM05D001324 ORTHO05D001220 3.5e-08 63.5 379 20.8
Thhalv10024528m.g Eutrema salsugineum HOM05D001324 ORTHO05D001220 3.5e-08 63.5 363 24.0
Peaxi162Scf00550g00440 Petunia axillaris HOM05D001324 ORTHO05D001220 3.5e-08 63.5 360 22.8
Pp3c10_7580 Physcomitrium patens HOM05D001324 ORTHO05D001220 3.5e-08 63.5 345 23.5
Thecc.03G320700 Theobroma cacao HOM05D001324 ORTHO05D001220 3.5e-08 63.5 378 21.7
Prupe.5G013900 Prunus persica HOM05D001324 ORTHO05D001220 4.6e-08 63.2 381 20.7
QL12p003548 Quercus lobata HOM05D001324 ORTHO05D001220 4.6e-08 63.2 364 23.1
AUR62030405 Chenopodium quinoa HOM05D001324 ORTHO05D001220 6.0e-08 62.8 354 22.6
AUR62030404 Chenopodium quinoa HOM05D001324 ORTHO05D001220 7.9e-08 62.4 368 21.2
Os10g0475100 Oryza sativa ssp. japonica HOM05D001324 ORTHO05D001220 7.9e-08 62.4 370 24.9
Eucgr.D02566 Eucalyptus grandis HOM05D001324 ORTHO05D001220 1.0e-07 62.0 334 21.0
Cpa.g.sc165.33 Carica papaya HOM05D001324 ORTHO05D001220 1.3e-07 61.6 365 24.1
EL10Ac5g12590 Beta vulgaris HOM05D001324 ORTHO05D001220 2.3e-07 60.8 386 21.2
Nn3g19722 Nelumbo nucifera HOM05D001324 ORTHO05D001220 3.0e-07 60.5 374 22.7
Phvul.002G122600 Phaseolus vulgaris HOM05D001324 ORTHO05D001220 3.0e-07 60.5 374 22.2
Pp3c14_16140 Physcomitrium patens HOM05D001324 ORTHO05D001220 3.9e-07 60.1 365 23.8
Psat2g145000 Pisum sativum HOM05D001324 ORTHO05D001220 3.9e-07 60.1 363 20.4
Carub.0003s2367 Capsella rubella HOM05D001324 ORTHO05D001220 6.7e-07 59.3 377 23.9
SMO234G0068 Selaginella moellendorffii HOM05D001324 ORTHO05D001220 6.7e-07 59.3 374 21.7
EL10Ac5g12592 Beta vulgaris HOM05D001324 ORTHO05D001220 8.7e-07 58.9 374 20.6
HanXRQChr09g0264571 Helianthus annuus HOM05D001324 ORTHO05D001220 8.7e-07 58.9 357 24.1
SMO196G0016 Selaginella moellendorffii HOM05D001324 ORTHO05D001220 8.7e-07 58.9 374 21.4
SEGI_04388 Sequoiadendron giganteum HOM05D001324 ORTHO05D001220 8.7e-07 58.9 363 22.9
AUR62010487 Chenopodium quinoa HOM05D001324 ORTHO05D001220 1.1e-06 58.5 363 21.8
Migut.D00452 Erythranthe guttata HOM05D001324 ORTHO05D001220 1.1e-06 58.5 358 24.3
Peaxi162Scf00045g01020 Petunia axillaris HOM05D001324 ORTHO05D001220 1.1e-06 58.5 346 21.7
Solyc08g005630.3 Solanum lycopersicum HOM05D001324 ORTHO05D001220 1.9e-06 57.8 388 19.3
DCAR_000925 Daucus carota HOM05D001324 ORTHO05D001220 2.5e-06 57.4 369 23.6
Sopen08g001680 Solanum pennellii HOM05D001324 ORTHO05D001220 3.3e-06 57.0 386 19.4
PGSC0003DMG400018458 Solanum tuberosum HOM05D001324 ORTHO05D001220 3.3e-06 57.0 364 19.8
TPR.G40705 Trifolium pratense HOM05D001324 ORTHO05D001220 5.7e-06 56.2 72 31.9
Manes.12G034700 Manihot esculenta HOM05D001324 ORTHO05D001220 9.6e-06 55.5 363 24.5


User provided reference genes

Program Settings