Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020998 Carpinus fangiana HOM05D000874 ORTHO05D001049 1.2e-64 249.6 123 100.0
Cfa016521 Carpinus fangiana HOM05D000874 ORTHO05D001049 2.1e-35 152.5 77 97.4
Haze_19522 Corylus avellana HOM05D000874 ORTHO05D001049 4.2e-28 128.3 83 80.7
Cfa016522 Carpinus fangiana HOM05D000874 ORTHO05D001049 1.0e-13 80.5 98 51.0
Prupe.7G119400 Prunus persica HOM05D000874 ORTHO05D001049 6.5e-13 77.8 109 41.3
Prupe.7G119500 Prunus persica HOM05D000874 ORTHO05D001049 2.5e-12 75.9 83 48.2
TAR369G1004 Trochodendron aralioides HOM05D000874 ORTHO05D001049 4.2e-12 75.1 94 51.1
CiPaw.10G004500 Carya illinoinensis HOM05D000874 ORTHO05D001049 1.6e-11 73.2 64 59.4
TAR369G0865 Trochodendron aralioides HOM05D000874 ORTHO05D001049 1.8e-10 69.7 85 49.4
Haze_19523 Corylus avellana HOM05D000874 ORTHO05D001049 6.7e-10 67.8 82 52.4
TAR369G0434 Trochodendron aralioides HOM05D000874 ORTHO05D001049 6.7e-10 67.8 58 63.8
ClCG04G009700 Citrullus lanatus HOM05D000874 ORTHO05D001049 8.8e-10 67.4 67 52.2
CsaV3_6G040360 Cucumis sativus L. HOM05D000874 ORTHO05D001049 8.8e-10 67.4 84 42.9
RcHm_v2.0_Chr3g0472311 Rosa chinensis HOM05D000874 ORTHO05D001049 8.8e-10 67.4 98 43.9
TWI53G0240 Tripterygium wilfordii HOM05D000874 ORTHO05D001049 1.1e-09 67.0 78 48.7
Cfa016523 Carpinus fangiana HOM05D000874 ORTHO05D001049 1.5e-09 66.6 69 56.5
FAN14G2137 Fragaria x ananassa HOM05D000874 ORTHO05D001049 1.5e-09 66.6 151 33.1
Sed0024499 Sechium edule HOM05D000874 ORTHO05D001049 2.0e-09 66.2 62 46.8
FAN02G0261 Fragaria x ananassa HOM05D000874 ORTHO05D001049 2.6e-09 65.9 75 48.0
Migut.L01749 Erythranthe guttata HOM05D000874 ORTHO05D001049 3.3e-09 65.5 78 47.4
FvH4_6g17650 Fragaria vesca HOM05D000874 ORTHO05D001049 4.4e-09 65.1 67 50.7
TWI53G1141 Tripterygium wilfordii HOM05D000874 ORTHO05D001049 4.4e-09 65.1 78 48.7
MSTRG.26656 Avicennia marina HOM05D000874 ORTHO05D001049 5.7e-09 64.7 84 48.8
FAN05G1754 Fragaria x ananassa HOM05D000874 ORTHO05D001049 5.7e-09 64.7 80 48.8
FAN05G3328 Fragaria x ananassa HOM05D000874 ORTHO05D001049 5.7e-09 64.7 73 50.7
FAN05G3374 Fragaria x ananassa HOM05D000874 ORTHO05D001049 5.7e-09 64.7 80 48.8
FAN05G3737 Fragaria x ananassa HOM05D000874 ORTHO05D001049 5.7e-09 64.7 73 50.7
Rhsim03G0082400 Rhododendron simsii HOM05D000874 ORTHO05D001049 7.4e-09 64.3 89 48.3
Solyc09g008960.2 Solanum lycopersicum HOM05D000874 ORTHO05D001049 7.4e-09 64.3 74 50.0
Atru.chr8.1656 Acer truncatum HOM05D000874 ORTHO05D001049 9.7e-09 63.9 79 46.8
FAN09G2693 Fragaria x ananassa HOM05D000874 ORTHO05D001049 1.3e-08 63.5 67 50.7
HanXRQChr01g0028361 Helianthus annuus HOM05D000874 ORTHO05D001049 1.3e-08 63.5 85 43.5
Ciclev10013817m.g Citrus clementina HOM05D000874 ORTHO05D001049 2.2e-08 62.8 85 45.9
TAR369G0064 Trochodendron aralioides HOM05D000874 ORTHO05D001049 2.8e-08 62.4 77 53.2
Lsat_1_v5_gn_1_50520 Lactuca sativa HOM05D000874 ORTHO05D001049 3.7e-08 62.0 97 37.1
TPR.G36190 Trifolium pratense HOM05D000874 ORTHO05D001049 3.7e-08 62.0 68 47.1
Hma1.2p1_0006F.1_g004710 Hydrangea macrophylla HOM05D060563 ORTHO05D001049 6.3e-08 61.2 63 52.4
Nitab4.5_0010125g0010 Nicotiana tabacum HOM05D000874 ORTHO05D001049 6.3e-08 61.2 123 36.6
Peaxi162Scf00412g00713 Petunia axillaris HOM05D000874 ORTHO05D001049 6.3e-08 61.2 103 42.7
Cc06_g05100 Coffea canephora HOM05D000874 ORTHO05D001049 1.1e-07 60.5 74 48.6
TPR.G7022 Trifolium pratense HOM05D000874 ORTHO05D001049 1.1e-07 60.5 52 53.8
FAN02G2438 Fragaria x ananassa HOM05D000874 ORTHO05D001049 1.4e-07 60.1 79 46.8
MD14G1014000 Malus domestica HOM05D000874 ORTHO05D001049 1.4e-07 60.1 75 44.0
VMungo1383G3000 Vigna mungo HOM05D000874 ORTHO05D001049 1.4e-07 60.1 64 53.1
Glyma.19G190500 Glycine max HOM05D000874 ORTHO05D001049 1.8e-07 59.7 81 46.9
MD14G1014100 Malus domestica HOM05D000874 ORTHO05D001049 1.8e-07 59.7 76 43.4
Potri.010G244400 Populus trichocarpa HOM05D000874 ORTHO05D001049 1.8e-07 59.7 97 41.2
vmacro07376 Vaccinium macrocarpon HOM05D000874 ORTHO05D001049 1.8e-07 59.7 72 44.4
PGSC0003DMG402002685 Solanum tuberosum HOM05D000874 ORTHO05D001049 2.4e-07 59.3 74 45.9
Actinidia11325 Actinidia chinensis HOM05D000874 ORTHO05D001049 3.1e-07 58.9 118 37.3
FAN02G4103 Fragaria x ananassa HOM05D000874 ORTHO05D001049 3.1e-07 58.9 65 47.7
Lj2A127G88 Lonicera japonica HOM05D000874 ORTHO05D001049 5.3e-07 58.2 84 41.7
HanXRQChr01g0028371 Helianthus annuus HOM05D000874 ORTHO05D001049 7.0e-07 57.8 86 37.2
Oeu023851.2 Olea europaea HOM05D000874 ORTHO05D001049 7.0e-07 57.8 86 43.0
RcHm_v2.0_Chr3g0471901 Rosa chinensis HOM05D000874 ORTHO05D001049 7.0e-07 57.8 67 49.3
CAN.G824.44 Capsicum annuum HOM05D000874 ORTHO05D001049 9.1e-07 57.4 52 57.7
Psat3g036200 Pisum sativum HOM05D000874 ORTHO05D001049 9.1e-07 57.4 82 41.5
RcHm_v2.0_Chr3g0471881 Rosa chinensis HOM05D000874 ORTHO05D001049 9.1e-07 57.4 68 48.5
Dinv19816 Davidia involucrata HOM05D000874 ORTHO05D001049 1.2e-06 57.0 61 54.1
DCAR_013957 Daucus carota HOM05D000874 ORTHO05D001049 1.5e-06 56.6 79 44.3
ECA248G1348 Erigeron canadensis HOM05D000874 ORTHO05D001049 1.5e-06 56.6 64 45.3
FAN14G2202 Fragaria x ananassa HOM05D000874 ORTHO05D001049 2.0e-06 56.2 57 50.9
Solyc09g008950.1 Solanum lycopersicum HOM05D000874 ORTHO05D001049 2.0e-06 56.2 78 47.4
GSVIVG01033766001 Vitis vinifera HOM05D000874 ORTHO05D001049 2.0e-06 56.2 95 36.8
BolC4t22804H Brassica oleracea HOM05D000874 ORTHO05D001049 3.4e-06 55.5 108 35.2
Medtr7g103570 Medicago truncatula HOM05D000874 ORTHO05D001049 3.4e-06 55.5 74 40.5
A05p09260 Brassica napus HOM05D000183 ORTHO05D000100 4.5e-06 55.1 108 35.2
BraA05t19883Z Brassica rapa HOM05D000874 ORTHO05D001049 4.5e-06 55.1 108 35.2
MD14G1013900 Malus domestica HOM05D000874 ORTHO05D001049 4.5e-06 55.1 82 40.2
Rhsim03G0082500 Rhododendron simsii HOM05D000874 ORTHO05D001049 4.5e-06 55.1 98 38.8
ECA248G2582 Erigeron canadensis HOM05D000874 ORTHO05D001049 5.9e-06 54.7 74 44.6
TPR.G40445 Trifolium pratense HOM05D000874 ORTHO05D001049 7.7e-06 54.3 60 45.0


User provided reference genes

Program Settings