Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020990 Carpinus fangiana HOM05D057840 ORTHO05D000167 3.8e-54 214.5 104 100.0
Cfa020635 Carpinus fangiana HOM05D057840 ORTHO05D000167 8.4e-38 160.2 80 100.0
Haze_12949 Corylus avellana HOM05D000003 ORTHO05D000167 4.1e-16 88.2 89 48.3
Haze_09308 Corylus avellana HOM05D001621 ORTHO05D000167 2.1e-12 75.9 89 36.0
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.0e-11 72.0 100 37.0
Haze_16342 Corylus avellana HOM05D032658 ORTHO05D000167 6.7e-11 70.9 89 36.0
Duzib187G0809 Durio zibethinus HOM05D000003 ORTHO05D000167 6.7e-11 70.9 93 39.8
Haze_08252 Corylus avellana HOM05D009546 ORTHO05D014580 8.8e-11 70.5 93 34.4
TWI73G0607 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-10 70.1 91 38.5
CSS0003020 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.5e-10 69.7 92 40.2
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 3.3e-10 68.6 94 36.2
Haze_13874 Corylus avellana HOM05D016406 ORTHO05D000167 9.7e-10 67.0 97 33.0
QL05p017790 Quercus lobata HOM05D000003 ORTHO05D000167 9.7e-10 67.0 87 37.9
TWI12G1409 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.3e-09 66.6 88 38.6
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.3e-09 66.6 99 32.3
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.3e-09 66.6 99 32.3
CiPaw.11G073400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.7e-09 66.2 94 35.1
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 2.2e-09 65.9 89 39.3
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-09 65.9 87 39.1
Haze_23484 Corylus avellana HOM05D062968 ORTHO05D016203 2.8e-09 65.5 89 31.5
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 2.8e-09 65.5 92 41.3
TWI12G0881 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.8e-09 65.5 89 34.8
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 4.8e-09 64.7 92 33.7
CSS0014223 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 4.8e-09 64.7 91 36.3
CSS0046159 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 4.8e-09 64.7 91 36.3
QL03p035095 Quercus lobata HOM05D000003 ORTHO05D000167 4.8e-09 64.7 94 36.2
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.8e-09 64.7 101 34.7
TWI63G0799 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 4.8e-09 64.7 88 36.4
Atru.chr4.1036 Acer truncatum HOM05D000003 ORTHO05D000167 6.3e-09 64.3 97 37.1
Atru.chr1.3915 Acer truncatum HOM05D000003 ORTHO05D000167 8.2e-09 63.9 91 35.2
Atru.chr5.2963 Acer truncatum HOM05D000003 ORTHO05D000006 8.2e-09 63.9 89 34.8
COL.COLO4_20671 Corchorus olitorius HOM05D000003 ORTHO05D000167 8.2e-09 63.9 90 34.4
TWI77G0924 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 8.2e-09 63.9 87 36.8
Atru.chr2.2201 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-08 63.5 90 37.8
COL.COLO4_35519 Corchorus olitorius HOM05D009774 ORTHO05D000167 1.1e-08 63.5 89 32.6
QL05p054879 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-08 63.5 88 36.4
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-08 63.5 96 34.4
QL09p012355 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-08 63.5 81 39.5
Haze_05315 Corylus avellana HOM05D022711 ORTHO05D000126 1.4e-08 63.2 88 35.2
Gorai.004G088300 Gossypium raimondii HOM05D008766 ORTHO05D010886 1.4e-08 63.2 97 33.0
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 1.8e-08 62.8 89 37.1
QL05p058297 Quercus lobata HOM05D008329 ORTHO05D010502 1.8e-08 62.8 83 37.3
Atru.chr11.995 Acer truncatum HOM05D000003 ORTHO05D000167 2.4e-08 62.4 89 40.4
Haze_12730 Corylus avellana HOM05D017763 ORTHO05D011569 2.4e-08 62.4 91 34.1
Atru.chr4.1619 Acer truncatum HOM05D000003 ORTHO05D000167 3.1e-08 62.0 96 35.4
Atru.chr6.486 Acer truncatum HOM05D000003 ORTHO05D000167 3.1e-08 62.0 94 37.2
Haze_13551 Corylus avellana HOM05D000003 ORTHO05D000167 3.1e-08 62.0 88 34.1
Haze_27622 Corylus avellana HOM05D000003 ORTHO05D000167 3.1e-08 62.0 89 37.1
Atru.chr11.1957 Acer truncatum HOM05D000003 ORTHO05D000167 4.1e-08 61.6 99 29.3
Haze_19109 Corylus avellana HOM05D021984 ORTHO05D000167 4.1e-08 61.6 80 42.5
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-08 61.6 87 37.9
TWI77G0377 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 4.1e-08 61.6 85 36.5
CSS0031955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 5.3e-08 61.2 89 37.1
Haze_03983 Corylus avellana HOM05D009031 ORTHO05D000167 5.3e-08 61.2 89 32.6
Haze_19506 Corylus avellana HOM05D000003 ORTHO05D000167 5.3e-08 61.2 66 47.0
QL10p052676 Quercus lobata HOM05D000003 ORTHO05D000167 5.3e-08 61.2 92 35.9
Atru.chr12.998 Acer truncatum HOM05D000003 ORTHO05D000167 6.9e-08 60.8 89 31.5
CiPaw.08G150600 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.9e-08 60.8 80 36.2
Cfa012542 Carpinus fangiana HOM05D009031 ORTHO05D000167 9.1e-08 60.5 90 32.2
QL03p029332 Quercus lobata HOM05D000003 ORTHO05D000167 9.1e-08 60.5 87 31.0
QL04p082656 Quercus lobata HOM05D000003 ORTHO05D000167 9.1e-08 60.5 99 31.3
Atru.chr10.1536 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-07 60.1 89 32.6
Haze_27611 Corylus avellana HOM05D009031 ORTHO05D000167 1.2e-07 60.1 89 29.2
Duzib147G1660 Durio zibethinus HOM05D000003 ORTHO05D000167 1.2e-07 60.1 100 31.0
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-07 60.1 91 33.0
TWI12G0325 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.2e-07 60.1 99 32.3
Haze_25123 Corylus avellana HOM05D000003 ORTHO05D000167 1.5e-07 59.7 98 35.7
Atru.chr11.167 Acer truncatum HOM05D000003 ORTHO05D000006 2.0e-07 59.3 94 29.8
Atru.chr8.96 Acer truncatum HOM05D000003 ORTHO05D000167 2.0e-07 59.3 90 30.0
Actinidia17137 Actinidia chinensis HOM05D000003 ORTHO05D026323 2.0e-07 59.3 87 36.8
QL05p053348 Quercus lobata HOM05D000003 ORTHO05D000167 2.0e-07 59.3 94 31.9
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 2.6e-07 58.9 82 40.2
Atru.chr4.1214 Acer truncatum HOM05D000003 ORTHO05D000167 2.6e-07 58.9 89 33.7
Atru.chr4.2367 Acer truncatum HOM05D000003 ORTHO05D000167 2.6e-07 58.9 91 38.5
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.6e-07 58.9 98 29.6
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.6e-07 58.9 98 29.6
Cfa000480 Carpinus fangiana HOM05D000003 ORTHO05D000167 3.4e-07 58.5 96 36.5
CiPaw.16G069900 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.4e-07 58.5 81 30.9
Haze_07769 Corylus avellana HOM05D000003 ORTHO05D000167 3.4e-07 58.5 98 28.6
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 3.4e-07 58.5 89 31.5
QL10p030412 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-07 58.5 100 35.0
QL12p021712 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-07 58.5 93 32.3
TWI09G0223 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.4e-07 58.5 89 34.8
Atru.chr1.3779 Acer truncatum HOM05D000003 ORTHO05D000167 4.5e-07 58.2 89 33.7
Atru.chr2.2490 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-07 58.2 88 30.7
Atru.chr3.3950 Acer truncatum HOM05D000003 ORTHO05D000167 4.5e-07 58.2 89 32.6
CSS0031820 Camellia sinensis var. sinensis HOM05D000698 ORTHO05D000004 4.5e-07 58.2 87 34.5
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 4.5e-07 58.2 87 29.9
Duzib205G1150 Durio zibethinus HOM05D000003 ORTHO05D000167 4.5e-07 58.2 93 30.1
Duzib251G0416 Durio zibethinus HOM05D000003 ORTHO05D000167 4.5e-07 58.2 93 26.9
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 4.5e-07 58.2 93 32.3
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.5e-07 58.2 98 29.6
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-07 57.8 89 28.1
Atru.chr7.573 Acer truncatum HOM05D000003 ORTHO05D000167 5.9e-07 57.8 89 38.2
QL12p001149 Quercus lobata HOM05D000003 ORTHO05D000167 5.9e-07 57.8 88 35.2
QL12p032525 Quercus lobata HOM05D000003 ORTHO05D000167 5.9e-07 57.8 89 29.2
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 5.9e-07 57.8 93 30.1
Sed0001376 Sechium edule HOM05D000003 ORTHO05D000167 5.9e-07 57.8 94 30.9
Sed0025544 Sechium edule HOM05D000003 ORTHO05D000167 5.9e-07 57.8 87 28.7
Atru.chr10.970 Acer truncatum HOM05D000003 ORTHO05D000167 7.7e-07 57.4 88 33.0
Atru.chr6.1815 Acer truncatum HOM05D000003 ORTHO05D000167 7.7e-07 57.4 92 34.8
Atru.chr7.862 Acer truncatum HOM05D000003 ORTHO05D000167 7.7e-07 57.4 89 34.8
QL06p030629 Quercus lobata HOM05D000003 ORTHO05D000167 7.7e-07 57.4 87 34.5
Atru.chr11.994 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-06 57.0 89 34.8
Atru.chr6.787 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-06 57.0 89 33.7
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 1.0e-06 57.0 96 34.4
QL11p053095 Quercus lobata HOM05D000003 ORTHO05D000167 1.0e-06 57.0 89 33.7
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.0e-06 57.0 98 28.6
Atru.chr10.535 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 56.6 89 30.3
Atru.chr13.2526 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-06 56.6 80 33.8
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 56.6 90 34.4
CANSAT54G1600 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-06 56.6 90 34.4
Haze_01518 Corylus avellana HOM05D000003 ORTHO05D044804 1.3e-06 56.6 93 33.3
Haze_23165 Corylus avellana HOM05D000003 ORTHO05D000167 1.3e-06 56.6 64 42.2
QL02p081060 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-06 56.6 94 30.9
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-06 56.2 89 33.7
Atru.chr2.2033 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 56.2 89 29.2
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 1.7e-06 56.2 92 28.3
Atru.chr7.1503 Acer truncatum HOM05D000003 ORTHO05D000006 1.7e-06 56.2 94 30.9
Atru.chr8.183 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 56.2 88 33.0
Atru.chr8.265 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 56.2 88 33.0
Atru.chr9.177 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 56.2 99 28.3
Atru.chr9.679 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 56.2 89 34.8
Haze_16683 Corylus avellana HOM05D000003 ORTHO05D000167 1.7e-06 56.2 84 39.3
QL02p037441 Quercus lobata HOM05D000003 ORTHO05D000167 1.7e-06 56.2 94 28.7
TAR256G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 1.7e-06 56.2 80 36.2
Atru.chr1.3769 Acer truncatum HOM05D000003 ORTHO05D000167 2.2e-06 55.8 89 36.0
Atru.chr12.1232 Acer truncatum HOM05D000003 ORTHO05D000167 2.2e-06 55.8 96 32.3
Atru.chr4.152 Acer truncatum HOM05D000003 ORTHO05D000167 2.2e-06 55.8 89 34.8
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 2.2e-06 55.8 93 32.3
CANSAT01G1760 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-06 55.8 90 33.3
CANSAT78G1753 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-06 55.8 90 33.3
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-06 55.8 87 37.9
Sed0026194 Sechium edule HOM05D000003 ORTHO05D000167 2.2e-06 55.8 93 32.3
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.5 89 30.3
Atru.chr12.1060 Acer truncatum HOM05D000003 ORTHO05D000167 2.9e-06 55.5 89 30.3
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 2.9e-06 55.5 88 33.0
Atru.chr6.1288 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.5 89 27.0
Atru.chr9.909 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.5 89 37.1
CANSAT80G0039 Cannabis sativa HOM05D000003 ORTHO05D000167 2.9e-06 55.5 90 33.3
Haze_08483 Corylus avellana HOM05D042742 ORTHO05D000167 2.9e-06 55.5 86 33.7
Haze_19933 Corylus avellana HOM05D000003 ORTHO05D000167 2.9e-06 55.5 71 36.6
QL05p012339 Quercus lobata HOM05D000003 ORTHO05D000167 2.9e-06 55.5 90 34.4
QL06p005642 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-06 55.5 87 33.3
TWI74G1173 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.9e-06 55.5 88 34.1
Atru.chr13.1628 Acer truncatum HOM05D000003 ORTHO05D000167 3.8e-06 55.1 85 32.9
Atru.chr4.1651 Acer truncatum HOM05D000003 ORTHO05D000167 3.8e-06 55.1 97 28.9
Atru.chr6.242 Acer truncatum HOM05D000003 ORTHO05D000006 3.8e-06 55.1 87 33.3
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 3.8e-06 55.1 93 30.1
Haze_18432 Corylus avellana HOM05D014997 ORTHO05D011569 3.8e-06 55.1 88 33.0
TPR.G15289 Trifolium pratense HOM05D000147 ORTHO05D004093 3.8e-06 55.1 92 28.3
Atru.chr1.3884 Acer truncatum HOM05D000003 ORTHO05D000167 5.0e-06 54.7 91 29.7
Atru.chr12.350 Acer truncatum HOM05D000003 ORTHO05D000167 5.0e-06 54.7 89 31.5
Actinidia40410 Actinidia chinensis HOM05D000003 ORTHO05D000167 5.0e-06 54.7 87 36.8
Duzib084G0587 Durio zibethinus HOM05D000003 ORTHO05D000167 5.0e-06 54.7 90 32.2
Duzib264G0259 Durio zibethinus HOM05D000003 ORTHO05D000167 5.0e-06 54.7 94 28.7
Lj2g0019468 Lotus japonicus HOM05D000003 ORTHO05D000167 5.0e-06 54.7 94 29.8
Prupe.7G049300 Prunus persica HOM05D000003 ORTHO05D000004 5.0e-06 54.7 94 29.8
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 5.0e-06 54.7 89 31.5
Atru.chr10.544 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-06 54.3 89 29.2
Atru.chr11.235 Acer truncatum HOM05D000003 ORTHO05D000167 6.5e-06 54.3 85 31.8
Atru.chr6.1712 Acer truncatum HOM05D000003 ORTHO05D000167 6.5e-06 54.3 84 34.5
Atru.chr9.1010 Acer truncatum HOM05D000003 ORTHO05D000167 6.5e-06 54.3 90 30.0
Gorai.004G040000 Gossypium raimondii HOM05D008766 ORTHO05D010886 6.5e-06 54.3 94 29.8
Atru.chr13.1475 Acer truncatum HOM05D000003 ORTHO05D000167 8.5e-06 53.9 97 29.9
Atru.chr13.1676 Acer truncatum HOM05D000003 ORTHO05D000006 8.5e-06 53.9 91 27.5
Atru.chr2.2868 Acer truncatum HOM05D000003 ORTHO05D000004 8.5e-06 53.9 89 30.3
Atru.chr5.1598 Acer truncatum HOM05D000856 ORTHO05D000167 8.5e-06 53.9 99 28.3
Atru.chr7.536 Acer truncatum HOM05D000003 ORTHO05D000167 8.5e-06 53.9 89 31.5
Haze_18357 Corylus avellana HOM05D025031 ORTHO05D000167 8.5e-06 53.9 99 30.3
Duzib205G0833 Durio zibethinus HOM05D000003 ORTHO05D000167 8.5e-06 53.9 91 28.6
QL03p039168 Quercus lobata HOM05D000003 ORTHO05D000167 8.5e-06 53.9 99 33.3
QL10p036891 Quercus lobata HOM05D000003 ORTHO05D000004 8.5e-06 53.9 87 29.9
TAR331G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 8.5e-06 53.9 93 30.1


User provided reference genes

Program Settings