Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020968 Carpinus fangiana HOM05D008272 ORTHO05D010429 2.5e-32 141.4 65 100.0
Haze_09670 Corylus avellana HOM05D008272 ORTHO05D010429 6.9e-30 133.3 65 92.3
CiPaw.12G129300 Carya illinoinensis HOM05D008272 ORTHO05D010429 2.0e-29 131.7 65 89.2
QL08p010511 Quercus lobata HOM05D008272 ORTHO05D010429 1.7e-28 128.6 64 87.5
PGR031G2232 Punica granatum HOM05D008272 ORTHO05D010429 1.1e-27 125.9 64 84.4
CiPaw.11G188800 Carya illinoinensis HOM05D008272 ORTHO05D010429 1.9e-27 125.2 61 88.5
GSVIVG01037640001 Vitis vinifera HOM05D008272 ORTHO05D010429 2.7e-26 121.3 62 82.3
Cpa.g.sc97.8 Carica papaya HOM05D008272 ORTHO05D010429 1.3e-25 119.0 62 80.6
Eucgr.F03464 Eucalyptus grandis HOM05D008272 ORTHO05D010429 6.7e-25 116.7 61 77.0
Ciclev10008983m.g Citrus clementina HOM05D008272 ORTHO05D010429 1.5e-24 115.5 61 77.0
VMungo0647G0594 Vigna mungo HOM05D008272 ORTHO05D010429 2.5e-24 114.8 62 77.4
Manes.15G072400 Manihot esculenta HOM05D008272 ORTHO05D010429 3.3e-24 114.4 62 77.4
arahy.Tifrunner.gnm1.ann1.MV6CSW Arachis hypogaea HOM05D008272 ORTHO05D010429 4.3e-24 114.0 62 79.0
arahy.Tifrunner.gnm1.ann1.UDA7AK Arachis hypogaea HOM05D008272 ORTHO05D010429 4.3e-24 114.0 62 79.0
Cc05_g13720 Coffea canephora HOM05D008272 ORTHO05D010429 5.6e-24 113.6 62 75.8
RcHm_v2.0_Chr5g0039361 Rosa chinensis HOM05D008272 ORTHO05D010429 5.6e-24 113.6 64 76.6
ClCG10G005430 Citrullus lanatus HOM05D008272 ORTHO05D010429 7.4e-24 113.2 63 76.2
Lalb_Chr17g0348421 Lupinus albus HOM05D008272 ORTHO05D010429 7.4e-24 113.2 62 74.2
Phvul.L001633 Phaseolus vulgaris HOM05D008272 ORTHO05D010429 7.4e-24 113.2 62 77.4
Gohir.D01G066300 Gossypium hirsutum HOM05D008272 ORTHO05D010429 9.6e-24 112.8 62 72.6
Gorai.002G088200 Gossypium raimondii HOM05D008272 ORTHO05D010429 3.7e-23 110.9 62 71.0
MBI16_g12297_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 3.7e-23 110.9 61 75.4
Potri.011G138900 Populus trichocarpa HOM05D008272 ORTHO05D010429 3.7e-23 110.9 62 72.6
Gohir.A01G079200 Gossypium hirsutum HOM05D008272 ORTHO05D010429 4.8e-23 110.5 62 71.0
ATR0752G027 Amborella trichopoda HOM05D008272 ORTHO05D010429 6.2e-23 110.2 64 71.9
COL.COLO4_09657 Corchorus olitorius HOM05D008272 ORTHO05D010429 6.2e-23 110.2 61 72.1
Duzib170G0415 Durio zibethinus HOM05D008272 ORTHO05D010429 8.1e-23 109.8 62 71.0
MBI02_g22115_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 8.1e-23 109.8 61 75.4
Thecc.07G038600 Theobroma cacao HOM05D008272 ORTHO05D010429 1.1e-22 109.4 62 72.6
CsaV3_3G005170 Cucumis sativus L. HOM05D008272 ORTHO05D010429 1.4e-22 109.0 61 72.1
MELO3C025383.2 Cucumis melo HOM05D008272 ORTHO05D010429 1.8e-22 108.6 61 73.8
Thecc.07G038700 Theobroma cacao HOM05D008272 ORTHO05D010429 1.8e-22 108.6 62 72.6
Hund01995 Selenicereus undatus HOM05D008272 ORTHO05D010429 2.4e-22 108.2 62 67.7
Eucgr.F00768 Eucalyptus grandis HOM05D008272 ORTHO05D010429 5.3e-22 107.1 62 71.0
Hund14975 Selenicereus undatus HOM05D008272 ORTHO05D010429 6.9e-22 106.7 62 67.7
Hund23252 Selenicereus undatus HOM05D008272 ORTHO05D010429 4.5e-21 104.0 61 67.2
CAN.G337.128 Capsicum annuum HOM05D008272 ORTHO05D010429 5.8e-21 103.6 56 76.8
Migut.M01769 Erythranthe guttata HOM05D008272 ORTHO05D010429 5.8e-21 103.6 61 72.1
Hma1.2p1_1162F.1_g262620 Hydrangea macrophylla HOM05D008272 ORTHO05D010429 5.8e-21 103.6 62 69.4
Lj1A872T54 Lonicera japonica HOM05D008272 ORTHO05D010429 2.2e-20 101.7 61 67.2
EL10Ac4g07813 Beta vulgaris HOM05D008272 ORTHO05D010429 2.9e-20 101.3 62 61.3
PGR083G1743 Punica granatum HOM05D008272 ORTHO05D010429 4.9e-20 100.5 62 66.1
Os04g0625200 Oryza sativa ssp. japonica HOM05D008272 ORTHO05D010429 6.5e-20 100.1 63 66.7
HPP92_011139 Vanilla planifolia HOM05D008272 ORTHO05D010429 1.1e-19 99.4 62 69.4
Sabra11G0124700 Salix brachista HOM05D008272 ORTHO05D010429 3.2e-19 97.8 62 62.9
Sabra11G0124400 Salix brachista HOM05D008272 ORTHO05D010429 4.2e-19 97.4 59 69.5
MD11G1219100 Malus domestica HOM05D008272 ORTHO05D010429 7.1e-19 96.7 62 69.4
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 6.7e-17 90.1 64 54.7
FAN24G3338 Fragaria x ananassa HOM05D008272 ORTHO05D010429 1.9e-16 88.6 62 66.1
SMO119G0124 Selaginella moellendorffii HOM05D008272 ORTHO05D010429 1.9e-16 88.6 62 59.7
FvH4_2g04690 Fragaria vesca HOM05D008272 ORTHO05D010429 1.6e-15 85.5 62 64.5
MD03G1201900 Malus domestica HOM05D008272 ORTHO05D010429 1.1e-11 72.8 41 78.0


User provided reference genes

Program Settings