Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020839 Carpinus fangiana HOM05D006662 ORTHO05D008378 1.4e-22 108.6 51 100.0
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 8.6e-20 99.4 49 93.9
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 2.1e-18 94.7 49 89.8
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 8.1e-10 66.2 49 67.3
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 4.0e-09 63.9 49 65.3
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 4.0e-09 63.9 49 65.3
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 9.0e-09 62.8 50 62.0
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 1.5e-08 62.0 50 62.0
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 2.0e-08 61.6 49 61.2
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 2.6e-08 61.2 49 63.3
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 2.6e-08 61.2 49 59.2
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 5.8e-08 60.1 49 63.3
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 9.9e-08 59.3 49 59.2
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 9.9e-08 59.3 50 60.0
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.3e-07 58.9 49 61.2
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 1.7e-07 58.5 49 59.2
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.7e-07 58.5 49 61.2
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 2.2e-07 58.2 49 63.3
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 2.2e-07 58.2 49 61.2
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.9e-07 57.8 50 60.0
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.9e-07 57.8 50 60.0
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 4.9e-07 57.0 49 59.2
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 4.9e-07 57.0 49 59.2
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 4.9e-07 57.0 49 59.2
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 4.9e-07 57.0 49 59.2
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 4.9e-07 57.0 50 60.0
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 8.4e-07 56.2 49 59.2
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 1.1e-06 55.8 49 59.2
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.9e-06 55.1 49 59.2
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 3.2e-06 54.3 49 59.2
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 5.4e-06 53.5 50 52.0
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 5.4e-06 53.5 49 57.1
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 7.1e-06 53.1 49 55.1
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 7.1e-06 53.1 49 55.1
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 7.1e-06 53.1 49 55.1
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 9.3e-06 52.8 49 57.1
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 9.3e-06 52.8 50 54.0


User provided reference genes

Program Settings