Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 0.0e+00 1413.3 707 100.0
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 0.0e+00 1303.5 713 92.7
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 0.0e+00 1179.5 714 83.9
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 0.0e+00 1155.2 709 83.6
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 0.0e+00 1085.1 705 79.4
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 0.0e+00 1085.1 705 79.4
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 0.0e+00 1081.2 703 78.8
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 0.0e+00 1078.2 711 76.8
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 9.7e-312 1072.8 714 78.2
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 1.9e-311 1072.0 703 77.0
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 1.7e-307 1058.9 708 76.3
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 5.5e-306 1053.9 755 72.2
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 7.1e-306 1053.5 703 75.8
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 7.9e-305 1050.0 704 77.0
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 2.1e-302 1042.0 681 78.1
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 1.8e-301 1038.9 710 74.6
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 3.1e-301 1038.1 698 76.1
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 6.9e-301 1036.9 695 75.4
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.3e-299 1032.7 708 74.4
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 1.3e-299 1032.7 705 74.5
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 1.7e-299 1032.3 708 74.4
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 8.5e-299 1030.0 703 75.0
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 2.5e-298 1028.5 703 74.7
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 4.2e-298 1027.7 703 74.5
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.2e-297 1026.2 710 75.6
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 4.3e-295 1017.7 707 74.0
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 4.3e-295 1017.7 707 73.7
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 1.8e-293 1012.3 708 74.2
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 2.6e-292 1008.4 707 74.0
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 1.7e-291 1005.7 710 72.4
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 5.0e-291 1004.2 705 73.0
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 2.5e-290 1001.9 682 73.5
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 1.2e-289 999.6 680 74.0
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 7.9e-289 996.9 666 75.1
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 7.9e-289 996.9 666 75.5
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 6.7e-288 993.8 725 71.9
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 6.7e-288 993.8 694 73.9
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 4.4e-287 991.1 717 72.0
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 9.7e-287 989.9 682 73.6
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 1.7e-286 989.2 715 71.0
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 2.8e-286 988.4 686 73.2
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 6.3e-286 987.3 709 71.7
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 1.8e-285 985.7 687 73.2
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 4.1e-285 984.6 695 72.8
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 9.1e-285 983.4 693 75.0
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 9.1e-285 983.4 711 70.7
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 1.2e-284 983.0 678 74.5
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 1.4e-282 976.1 689 72.6
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 5.5e-282 974.2 677 73.4
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 5.5e-282 974.2 666 73.6
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 7.2e-282 973.8 707 70.9
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 7.2e-282 973.8 715 71.5
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 2.1e-281 972.2 666 74.3
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 4.7e-281 971.1 684 72.4
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 7.9e-281 970.3 681 72.4
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 1.4e-280 969.5 684 72.2
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.4e-280 969.5 680 72.5
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 6.7e-280 967.2 689 71.8
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.1e-279 966.5 698 71.8
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 2.0e-279 965.7 689 71.8
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 3.3e-279 964.9 682 71.7
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 5.7e-279 964.1 702 70.9
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 2.8e-278 961.8 709 70.5
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 3.7e-278 961.4 667 73.9
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 8.2e-278 960.3 713 70.5
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 3.1e-277 958.4 666 73.3
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 1.3e-275 953.0 684 71.3
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 1.7e-275 952.6 631 78.0
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 1.8e-272 942.6 669 72.2
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 4.0e-272 941.4 732 68.4
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 9.7e-271 936.8 677 72.7
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.8e-270 935.3 707 68.7
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 4.1e-269 931.4 692 69.9
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 2.7e-265 918.7 604 77.3
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.2e-260 903.3 708 67.1
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 2.5e-258 895.6 676 67.3
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 8.0e-257 890.6 669 67.1
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 3.0e-256 888.6 726 64.5
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 1.4e-253 879.8 697 67.3
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 1.0e-251 873.6 597 72.2
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 6.1e-249 864.4 633 69.7
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 1.3e-246 856.7 666 68.3
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 4.6e-244 848.2 676 66.7
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 1.7e-243 846.3 679 63.6
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 1.1e-240 837.0 576 73.8
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 5.8e-239 831.2 617 70.8
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.2e-238 829.3 573 73.8
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 4.9e-238 828.2 582 71.8
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 8.3e-238 827.4 680 64.0
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 1.9e-229 799.7 634 66.1
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 1.5e-215 753.4 1248 40.1
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 5.1e-187 658.7 437 77.8
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 9.0e-184 647.9 664 52.0
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 4.5e-183 645.6 618 54.4
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 6.5e-182 641.7 627 54.5
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 4.3e-178 629.0 670 51.3
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 1.4e-173 614.0 400 76.5
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 1.5e-167 594.0 401 72.3
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 3.3e-162 576.2 423 72.8
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 4.9e-137 492.7 726 42.1
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.6e-132 477.6 333 71.8
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 8.3e-129 465.3 615 43.7
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 3.5e-127 459.9 474 51.9
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 4.6e-119 433.0 275 77.5
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 2.2e-105 387.5 317 67.5
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.5e-101 374.0 225 83.6
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 1.4e-96 358.2 282 68.1
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 4.2e-96 356.7 464 48.9
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 8.1e-92 342.4 312 61.9
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 1.0e-86 325.5 268 64.6
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 3.9e-86 323.6 628 37.7
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 2.6e-82 310.8 203 76.4
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.9e-80 304.7 203 74.4
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.4e-67 261.9 155 83.2
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.7e-49 201.8 148 67.6
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 3.0e-46 191.0 147 70.7
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 5.2e-38 163.7 203 49.3
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 9.1e-35 152.9 102 71.6
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 1.0e-33 149.4 249 43.0
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 7.7e-26 123.2 132 53.8
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.6e-23 115.5 92 64.1
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.7e-20 105.5 68 72.1
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 6.3e-20 103.6 108 57.4
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 9.2e-19 99.8 117 43.6
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 3.6e-15 87.8 53 75.5
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 9.2e-11 73.2 107 41.1


User provided reference genes

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