Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020785 Carpinus fangiana HOM05D019529 ORTHO05D008827 4.1e-285 984.2 549 100.0
Haze_19141 Corylus avellana HOM05D019529 ORTHO05D008827 2.2e-222 775.8 559 75.1
QL02p094184 Quercus lobata HOM05D019529 ORTHO05D008827 7.1e-43 179.5 608 32.4
QL02p094192 Quercus lobata HOM05D019529 ORTHO05D008827 5.6e-24 116.7 266 36.8
Dinv42819 Davidia involucrata HOM05D019090 ORTHO05D008827 4.2e-19 100.5 131 42.7
Dinv43281 Davidia involucrata HOM05D019090 ORTHO05D008827 4.2e-19 100.5 131 42.7
Rhsim03G0259300 Rhododendron simsii HOM05D008438 ORTHO05D008827 1.0e-17 95.9 89 51.7
Actinidia38661 Actinidia chinensis HOM05D008438 ORTHO05D008827 3.9e-17 94.0 133 40.6
Potri.006G180600 Populus trichocarpa HOM05D037217 ORTHO05D008827 1.4e-14 85.5 85 50.6
COL.COLO4_05403 Corchorus olitorius HOM05D019525 ORTHO05D008827 6.9e-14 83.2 82 47.6
Peaxi162Scf00563g00416 Petunia axillaris HOM05D022295 ORTHO05D008827 9.0e-14 82.8 140 34.3
Actinidia08936 Actinidia chinensis HOM05D017379 ORTHO05D008827 4.5e-13 80.5 78 44.9
TWI34G1835 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 4.5e-13 80.5 78 51.3
CAN.G1008.6 Capsicum annuum HOM05D008438 ORTHO05D008827 5.8e-13 80.1 83 44.6
Sopen07g002110 Solanum pennellii HOM05D022295 ORTHO05D008827 7.6e-13 79.7 170 33.5
TAR625G0030 Trochodendron aralioides HOM05D008438 ORTHO05D008827 7.6e-13 79.7 78 48.7
Nitab4.5_0006744g0030 Nicotiana tabacum HOM05D022295 ORTHO05D008827 2.2e-12 78.2 137 33.6
Prupe.3G103500 Prunus persica HOM05D015689 ORTHO05D008827 2.2e-12 78.2 77 44.2
Sabra06G0137500 Salix brachista HOM05D037217 ORTHO05D008827 2.2e-12 78.2 67 55.2
TWI32G0905 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 2.2e-12 78.2 78 52.6
HanXRQChr05g0131701 Helianthus annuus HOM05D019090 ORTHO05D008827 4.9e-12 77.0 107 34.6
Nitab4.5_0001036g0130 Nicotiana tabacum HOM05D022295 ORTHO05D008827 4.9e-12 77.0 137 32.1
Rhsim12G0185500 Rhododendron simsii HOM05D017379 ORTHO05D008827 4.9e-12 77.0 66 47.0
Glyma.15G002400 Glycine max HOM05D022716 ORTHO05D008827 6.5e-12 76.6 73 47.9
Glyma.13G371300 Glycine max HOM05D022716 ORTHO05D008827 8.4e-12 76.3 73 47.9
MSTRG.22807 Avicennia marina HOM05D008438 ORTHO05D008827 1.1e-11 75.9 74 45.9
Solyc07g005980.2 Solanum lycopersicum HOM05D022295 ORTHO05D008827 1.1e-11 75.9 170 32.4
VMungo1080G1089 Vigna mungo HOM05D022716 ORTHO05D008827 1.1e-11 75.9 68 50.0
HanXRQChr04g0100031 Helianthus annuus HOM05D008438 ORTHO05D008827 1.4e-11 75.5 76 42.1
Lj3g0015243 Lotus japonicus HOM05D022716 ORTHO05D008827 1.4e-11 75.5 68 48.5
Nitab4.5_0004738g0100 Nicotiana tabacum HOM05D008438 ORTHO05D008827 1.4e-11 75.5 124 33.1
GSVIVG01016106001 Vitis vinifera HOM05D008438 ORTHO05D008827 2.5e-11 74.7 74 45.9
Aqoxy7G03345 Aquilegia oxysepala HOM05D008438 ORTHO05D008827 3.2e-11 74.3 70 45.7
Peaxi162Scf00314g01044 Petunia axillaris HOM05D008438 ORTHO05D008827 4.2e-11 73.9 66 42.4
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 5.5e-11 73.6 62 48.4
MD17G1226300 Malus domestica HOM05D015689 ORTHO05D008827 9.3e-11 72.8 63 46.0
Sc10g0008430 Simmondsia chinensis HOM05D008438 ORTHO05D008827 9.3e-11 72.8 62 48.4
TWI18G0426 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 9.3e-11 72.8 74 44.6
Cc04_g05290 Coffea canephora HOM05D008438 ORTHO05D008827 1.6e-10 72.0 148 33.8
Hma1.2p1_1914F.1_g307390 Hydrangea macrophylla HOM05D008438 ORTHO05D008827 2.1e-10 71.6 74 41.9
Phvul.005G183500 Phaseolus vulgaris HOM05D022716 ORTHO05D008827 2.1e-10 71.6 68 48.5
Hund12562 Selenicereus undatus HOM05D008438 ORTHO05D008827 2.1e-10 71.6 76 47.4
Haze_16688 Corylus avellana HOM05D008438 ORTHO05D008827 4.6e-10 70.5 76 42.1
PSO782G4356 Papaver somniferum HOM05D008438 ORTHO05D008827 4.6e-10 70.5 75 40.0
RcHm_v2.0_Chr2g0132351 Rosa chinensis HOM05D015689 ORTHO05D008827 4.6e-10 70.5 78 39.7
AUR62032995 Chenopodium quinoa HOM05D032589 ORTHO05D008827 6.0e-10 70.1 69 47.8
ECA247G0974 Erigeron canadensis HOM05D008438 ORTHO05D008827 6.0e-10 70.1 76 43.4
HanXRQChr05g0141581 Helianthus annuus HOM05D019090 ORTHO05D008827 6.0e-10 70.1 108 32.4
CANSAT56G0832 Cannabis sativa HOM05D008438 ORTHO05D008827 7.9e-10 69.7 78 37.2
PSO063G1826 Papaver somniferum HOM05D008438 ORTHO05D008827 7.9e-10 69.7 75 40.0
Migut.I00674 Erythranthe guttata HOM05D008438 ORTHO05D008827 1.3e-09 68.9 66 42.4
FAN02G3655 Fragaria x ananassa HOM05D015689 ORTHO05D008827 1.3e-09 68.9 78 39.7
PGSC0003DMG400011154 Solanum tuberosum HOM05D008438 ORTHO05D008827 1.3e-09 68.9 45 55.6
FvH4_6g28290 Fragaria vesca HOM05D015689 ORTHO05D008827 2.3e-09 68.2 78 39.7
FAN14G1731 Fragaria x ananassa HOM05D015689 ORTHO05D008827 2.3e-09 68.2 78 39.7
Manes.11G069100 Manihot esculenta HOM05D008438 ORTHO05D008827 2.3e-09 68.2 75 40.0
Sabra18G0088400 Salix brachista HOM05D037217 ORTHO05D008827 2.3e-09 68.2 72 51.4
EL10Ac8g19397 Beta vulgaris HOM05D032589 ORTHO05D008827 3.0e-09 67.8 69 47.8
Ciclev10026162m.g Citrus clementina HOM05D008438 ORTHO05D008827 3.9e-09 67.4 62 40.3
Duzib235G0641 Durio zibethinus HOM05D032892 ORTHO05D008827 3.9e-09 67.4 66 45.5
FAN09G3978 Fragaria x ananassa HOM05D015689 ORTHO05D008827 3.9e-09 67.4 78 39.7
Oeu004554.3 Olea europaea HOM05D008438 ORTHO05D008827 6.7e-09 66.6 81 39.5
Solyc03g117660.4 Solanum lycopersicum HOM05D008438 ORTHO05D008827 6.7e-09 66.6 58 41.4
Sopen03g036570 Solanum pennellii HOM05D008438 ORTHO05D008827 6.7e-09 66.6 58 41.4
Eucgr.F03984 Eucalyptus grandis HOM05D008438 ORTHO05D008827 8.7e-09 66.2 68 41.2
HanXRQChr02g0033611 Helianthus annuus HOM05D008438 ORTHO05D008827 8.7e-09 66.2 76 40.8
PGSC0003DMG400014154 Solanum tuberosum HOM05D008438 ORTHO05D008827 8.7e-09 66.2 58 41.4
SalBow7G4248 Salvia bowleyana HOM05D008438 ORTHO05D008827 1.5e-08 65.5 129 31.8
Sed0012806 Sechium edule HOM05D008438 ORTHO05D008827 1.5e-08 65.5 66 43.9
ECA234G2252 Erigeron canadensis HOM05D019529 ORTHO05D008827 3.3e-08 64.3 101 33.7
Manes.04G100800 Manihot esculenta HOM05D008438 ORTHO05D008827 3.3e-08 64.3 64 40.6
SGA_v2.0_scaffold5G02798 Striga asiatica HOM05D008438 ORTHO05D008827 3.3e-08 64.3 132 31.8
COL.COLO4_26771 Corchorus olitorius HOM05D032892 ORTHO05D008827 4.3e-08 63.9 61 44.3
AUR62025372 Chenopodium quinoa HOM05D030418 ORTHO05D008827 7.4e-08 63.2 152 33.6
AUR62028379 Chenopodium quinoa HOM05D030418 ORTHO05D008827 9.6e-08 62.8 81 42.0
ECA234G2497 Erigeron canadensis HOM05D019529 ORTHO05D008827 2.4e-06 58.2 100 36.0
Actinidia18261 Actinidia chinensis HOM05D017379 ORTHO05D008827 9.0e-06 56.2 70 38.6


User provided reference genes

Program Settings