Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.5e-53 212.6 109 100.0
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.3e-41 172.9 92 96.7
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 9.4e-40 166.8 92 94.6
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 9.8e-21 103.6 92 69.6
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.8e-17 91.7 92 64.1
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 6.8e-14 80.9 91 57.1
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 2.6e-13 79.0 94 54.3
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.2e-12 75.9 91 58.2
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 4.9e-12 74.7 92 53.3
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.1e-11 73.6 91 57.1
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.1e-11 73.6 91 57.1
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 1.4e-11 73.2 91 56.0
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 3.2e-11 72.0 91 54.9
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 1.2e-10 70.1 92 53.3
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 2.0e-10 69.3 96 51.0
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.7e-10 68.9 88 56.8
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 4.6e-10 68.2 93 50.5
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 6.0e-10 67.8 92 52.2
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 7.8e-10 67.4 92 50.0
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 7.8e-10 67.4 92 50.0
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 7.8e-10 67.4 93 49.5
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 2.3e-09 65.9 93 52.7
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 3.0e-09 65.5 87 54.0
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.9e-09 65.1 61 59.0
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 8.6e-09 63.9 92 48.9
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 8.6e-09 63.9 92 47.8
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.5e-08 63.2 87 51.7
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.9e-08 62.8 92 47.8
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.9e-08 62.8 93 47.3
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 2.5e-08 62.4 92 50.0
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 2.5e-08 62.4 93 45.2
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.3e-08 62.0 76 55.3
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 4.3e-08 61.6 93 49.5
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 4.3e-08 61.6 87 51.7
Sed0004136 Sechium edule HOM05D006256 ORTHO05D007833 7.3e-08 60.8 93 48.4
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.6e-07 59.7 89 44.9
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 3.6e-07 58.5 87 49.4
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 4.7e-07 58.2 91 48.4
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 6.2e-07 57.8 91 56.0
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.1e-06 57.0 92 44.6
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.4e-06 56.6 90 44.4
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.8e-06 56.2 86 46.5
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 2.3e-06 55.8 95 42.1
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 2.3e-06 55.8 98 50.0
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 3.1e-06 55.5 94 44.7
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.1e-06 55.5 93 41.9
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 3.1e-06 55.5 92 45.7
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 6.8e-06 54.3 90 46.7
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 6.8e-06 54.3 90 45.6
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 6.8e-06 54.3 90 46.7
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 8.9e-06 53.9 97 43.3
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 8.9e-06 53.9 90 45.6
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 8.9e-06 53.9 55 63.6


User provided reference genes

Program Settings