Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 2.3e-57 225.3 110 100.0
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 1.5e-48 196.1 110 90.9
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 4.9e-28 127.9 108 66.7
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 5.4e-27 124.4 104 67.3
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 5.4e-27 124.4 112 60.7
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 7.1e-27 124.0 99 65.7
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 1.6e-26 122.9 109 60.6
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 7.8e-26 120.6 117 54.7
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 1.3e-25 119.8 115 56.5
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 2.3e-25 119.0 103 59.2
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 2.3e-25 119.0 103 59.2
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 3.0e-25 118.6 101 62.4
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 5.1e-25 117.9 101 62.4
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 8.6e-25 117.1 105 60.0
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 1.1e-24 116.7 118 53.4
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 1.1e-24 116.7 101 61.4
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 1.1e-24 116.7 106 59.4
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 1.5e-24 116.3 103 57.3
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 1.9e-24 115.9 108 55.6
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 1.9e-24 115.9 92 64.1
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.9e-24 115.9 101 56.4
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 2.5e-24 115.5 108 58.3
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 2.5e-24 115.5 97 62.9
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 3.3e-24 115.2 101 60.4
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 3.3e-24 115.2 116 56.9
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 3.3e-24 115.2 102 56.9
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 7.3e-24 114.0 115 53.9
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 1.2e-23 113.2 108 55.6
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 1.6e-23 112.8 101 59.4
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 2.1e-23 112.5 108 54.6
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 2.1e-23 112.5 101 58.4
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 2.1e-23 112.5 109 57.8
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 3.6e-23 111.7 115 56.5
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 4.7e-23 111.3 108 57.4
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 4.7e-23 111.3 96 61.5
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 6.2e-23 110.9 109 55.0
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 6.2e-23 110.9 101 61.4
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 6.2e-23 110.9 108 57.4
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 8.1e-23 110.5 91 64.8
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 1.8e-22 109.4 107 53.3
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 3.1e-22 108.6 101 55.4
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 3.1e-22 108.6 108 53.7
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 6.8e-22 107.5 101 54.5
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 8.9e-22 107.1 100 56.0
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 8.9e-22 107.1 95 58.9
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 1.2e-21 106.7 101 54.5
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 1.2e-21 106.7 92 60.9
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 2.6e-21 105.5 114 53.5
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 3.4e-21 105.1 114 52.6
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 4.4e-21 104.8 59 81.4
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 7.6e-21 104.0 121 50.4
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 7.6e-21 104.0 101 57.4
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 9.9e-21 103.6 105 49.5
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 9.9e-21 103.6 59 79.7
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 1.3e-20 103.2 101 53.5
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 1.3e-20 103.2 78 66.7
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 1.7e-20 102.8 120 52.5
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 2.2e-20 102.4 87 62.1
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 2.2e-20 102.4 96 57.3
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 2.9e-20 102.1 60 78.3
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 3.8e-20 101.7 111 51.4
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 4.9e-20 101.3 86 58.1
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 1.1e-19 100.1 107 47.7
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 1.1e-19 100.1 109 54.1
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 1.1e-19 100.1 109 54.1
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 1.1e-19 100.1 60 76.7
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 1.4e-19 99.8 105 51.4
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 1.9e-19 99.4 90 53.3
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 1.9e-19 99.4 75 68.0
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 1.9e-19 99.4 107 54.2
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 2.4e-19 99.0 91 56.0
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 2.4e-19 99.0 91 56.0
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 3.2e-19 98.6 73 65.8
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 5.4e-19 97.8 68 72.1
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 5.4e-19 97.8 101 55.4
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 5.4e-19 97.8 104 55.8
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 7.1e-19 97.4 122 47.5
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 9.2e-19 97.1 63 68.3
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 9.2e-19 97.1 58 77.6
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 1.2e-18 96.7 67 64.2
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 1.2e-18 96.7 93 57.0
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 1.2e-18 96.7 104 55.8
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 3.5e-18 95.1 107 52.3
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 4.6e-18 94.7 86 60.5
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 6.0e-18 94.4 52 76.9
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 7.8e-18 94.0 84 59.5
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 7.8e-18 94.0 100 56.0
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 1.0e-17 93.6 108 51.9
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 1.0e-17 93.6 108 51.9
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 1.0e-17 93.6 102 52.9
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 1.7e-17 92.8 90 54.4
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 3.9e-17 91.7 86 55.8
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 6.6e-17 90.9 119 45.4
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 2.5e-16 89.0 105 48.6
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 4.3e-16 88.2 94 55.3
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 5.6e-16 87.8 107 49.5
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 1.2e-15 86.7 83 59.0
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 1.2e-15 86.7 92 50.0
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 2.8e-15 85.5 61 68.9
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 8.1e-15 84.0 68 64.7
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 8.1e-15 84.0 72 54.2
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 1.1e-14 83.6 72 52.8
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 1.8e-14 82.8 105 47.6
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 4.0e-14 81.6 92 51.1
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 3.8e-12 75.1 115 45.2
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 9.3e-11 70.5 59 57.6
A03p08530 Brassica napus HOM05D006906 ORTHO05D008578 1.6e-10 69.7 103 41.7
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 1.6e-10 69.7 59 57.6
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 3.3e-08 62.0 50 54.0
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 3.3e-08 62.0 47 61.7
BcaB05g23287 Brassica carinata HOM05D006906 ORTHO05D008578 1.6e-07 59.7 108 38.9
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 1.6e-07 59.7 57 54.4
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 1.8e-06 56.2 37 73.0
SMO367G0828 Selaginella moellendorffii HOM05D006906 ORTHO05D008578 3.1e-06 55.5 48 62.5


User provided reference genes

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