Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.2e-162 575.1 303 100.0
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 2.5e-151 538.9 306 91.5
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 3.7e-150 535.0 298 94.0
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 1.1e-149 533.5 298 94.0
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 2.9e-147 525.4 303 90.4
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 6.5e-147 524.2 304 85.5
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 3.2e-146 521.9 303 87.1
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 6.0e-145 517.7 300 88.7
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 7.9e-145 517.3 303 86.5
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 1.0e-144 516.9 300 88.7
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.8e-144 516.2 300 88.7
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.8e-144 516.2 280 90.0
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 3.0e-144 515.4 303 88.1
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 3.9e-144 515.0 300 89.0
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 6.7e-144 514.2 304 86.8
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 8.7e-144 513.8 297 90.2
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 8.7e-144 513.8 300 85.0
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.5e-143 513.1 300 85.3
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.5e-143 513.1 300 87.0
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 5.7e-143 511.1 306 85.0
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 7.4e-143 510.8 282 89.4
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 9.6e-143 510.4 282 89.0
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 1.6e-142 509.6 305 84.9
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 2.8e-142 508.8 300 87.3
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 2.8e-142 508.8 300 84.7
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 3.7e-142 508.4 303 84.8
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.7e-142 508.4 279 88.9
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 4.8e-142 508.1 300 83.7
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 6.3e-142 507.7 305 85.2
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.1e-141 506.9 301 87.0
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 1.1e-141 506.9 300 85.0
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 1.4e-141 506.5 300 85.7
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 1.4e-141 506.5 300 84.7
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 1.8e-141 506.1 278 88.5
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 1.8e-141 506.1 278 88.5
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 1.8e-141 506.1 278 88.5
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 1.8e-141 506.1 278 88.5
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 1.8e-141 506.1 278 88.5
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 2.4e-141 505.8 280 88.9
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 2.4e-141 505.8 281 91.5
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 2.4e-141 505.8 306 86.6
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 3.1e-141 505.4 300 84.0
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 3.1e-141 505.4 310 85.2
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 5.3e-141 504.6 300 86.3
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 6.9e-141 504.2 300 83.7
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 1.2e-140 503.4 300 84.0
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 1.2e-140 503.4 300 83.0
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.2e-140 503.4 302 86.1
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 2.6e-140 502.3 282 88.7
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 4.5e-140 501.5 278 87.4
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 4.5e-140 501.5 281 90.4
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 4.5e-140 501.5 306 84.0
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 4.5e-140 501.5 300 82.7
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 1.0e-139 500.4 300 82.3
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 1.0e-139 500.4 301 86.4
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 1.7e-139 499.6 280 86.4
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 1.7e-139 499.6 300 84.0
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 2.2e-139 499.2 300 83.0
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 3.8e-139 498.4 280 87.1
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 3.8e-139 498.4 282 87.2
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 3.8e-139 498.4 302 83.4
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 6.5e-139 497.7 300 85.0
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 8.5e-139 497.3 300 84.0
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 1.1e-138 496.9 302 85.1
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 1.9e-138 496.1 302 85.8
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.5e-138 495.7 303 84.5
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 2.5e-138 495.7 300 82.7
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 3.2e-138 495.4 387 73.9
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 5.5e-138 494.6 281 86.8
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 9.3e-138 493.8 302 85.1
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 1.6e-137 493.0 293 83.6
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 7.9e-137 490.7 282 86.9
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 7.9e-137 490.7 301 86.7
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 1.0e-136 490.3 273 86.8
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 1.3e-136 490.0 303 82.2
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 1.8e-136 489.6 282 86.2
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 3.9e-136 488.4 305 80.0
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 3.9e-136 488.4 281 86.8
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 5.1e-136 488.0 305 81.3
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 6.7e-136 487.6 304 80.9
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 6.7e-136 487.6 286 86.4
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 1.1e-135 486.9 280 85.4
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 1.9e-135 486.1 282 85.5
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 2.5e-135 485.7 300 82.7
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 9.7e-135 483.8 303 85.5
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 1.3e-134 483.4 265 89.8
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.3e-134 483.4 280 86.8
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 2.8e-134 482.3 303 82.5
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 4.8e-134 481.5 312 79.8
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 6.3e-134 481.1 282 85.1
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 1.1e-133 480.3 300 83.3
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 4.1e-133 478.4 305 79.3
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 1.2e-132 476.9 282 84.0
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 4.5e-132 474.9 282 83.7
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 1.3e-131 473.4 313 78.6
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 1.3e-131 473.4 281 84.7
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 8.5e-131 470.7 278 84.9
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 1.1e-130 470.3 304 78.6
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.4e-130 469.9 307 78.5
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 5.5e-130 468.0 280 85.4
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.2e-129 466.8 279 84.6
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 4.6e-129 464.9 298 78.5
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 6.1e-129 464.5 284 80.3
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.0e-128 463.8 282 82.3
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.8e-128 463.0 281 83.6
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 2.0e-127 459.5 281 82.6
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 9.7e-127 457.2 279 82.8
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 1.7e-126 456.4 282 81.6
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 1.7e-126 456.4 281 82.2
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 2.8e-126 455.7 280 82.1
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 4.8e-126 454.9 329 75.1
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 8.2e-126 454.1 282 82.6
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 1.2e-124 450.3 279 79.6
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 2.6e-124 449.1 302 77.2
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.2e-123 446.0 276 81.5
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 1.9e-122 443.0 287 77.4
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.2e-122 442.2 252 86.9
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 7.2e-122 441.0 282 78.7
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 4.7e-121 438.3 292 76.0
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 6.7e-120 434.5 300 72.3
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 2.0e-119 433.0 280 77.9
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 4.4e-119 431.8 252 84.5
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 3.5e-116 422.2 221 94.1
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 3.2e-114 415.6 243 84.8
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 1.6e-113 413.3 221 91.0
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 2.1e-113 412.9 280 76.8
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 4.0e-112 408.7 251 81.7
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 4.1e-109 398.7 218 89.9
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 4.1e-109 398.7 218 89.9
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 2.0e-108 396.4 278 69.1
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 8.8e-104 380.9 219 85.4
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 8.8e-104 380.9 251 74.1
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 2.6e-103 379.4 250 73.6
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 3.7e-102 375.6 250 71.6
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 7.0e-101 371.3 311 65.3
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 4.5e-100 368.6 200 91.0
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 2.8e-97 359.4 255 68.6
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 8.8e-96 354.4 215 84.2
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 2.7e-92 342.8 182 94.0
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 8.6e-91 337.8 182 91.2
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 3.6e-89 332.4 208 81.7
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 2.3e-83 313.2 174 89.7
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 2.8e-81 306.2 221 76.5
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 5.8e-79 298.5 183 80.3
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 1.6e-73 280.4 152 90.8
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 5.2e-64 248.8 146 84.2
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 5.2e-64 248.8 194 66.0
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 3.9e-59 232.6 209 63.2
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 9.9e-47 191.4 119 75.6
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 9.9e-47 191.4 236 47.5
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 3.2e-45 186.4 177 59.9
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 5.4e-45 185.7 158 63.9
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 2.1e-44 183.7 136 72.1
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 3.7e-41 172.9 105 78.1
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 7.1e-37 158.7 86 87.2
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 1.8e-35 154.1 96 76.0
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 1.7e-30 137.5 99 69.7
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.2e-30 137.1 88 77.3
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 1.9e-29 134.0 305 32.1
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 2.5e-29 133.7 191 46.6
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 5.1e-27 125.9 171 44.4
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 4.8e-25 119.4 66 90.9
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 4.8e-25 119.4 66 90.9
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 6.7e-19 99.0 62 82.3
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 6.7e-19 99.0 62 82.3
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 4.8e-17 92.8 187 38.0
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 6.9e-16 89.0 53 77.4
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 6.9e-16 89.0 85 56.5
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 2.9e-14 83.6 82 67.1
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 1.4e-13 81.3 79 54.4
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 5.5e-13 79.3 92 51.1
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 2.1e-12 77.4 59 64.4
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 1.4e-11 74.7 103 44.7
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 6.7e-11 72.4 62 61.3
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 2.6e-10 70.5 110 40.9
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 4.8e-09 66.2 43 79.1
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 2.6e-07 60.5 57 50.9
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.3e-06 58.2 34 79.4
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 1.7e-06 57.8 42 71.4
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 6.5e-06 55.8 38 71.1


User provided reference genes

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