Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020517 Carpinus fangiana HOM05D005851 ORTHO05D007137 1.2e-56 223.0 114 100.0
Haze_09033 Corylus avellana HOM05D000491 ORTHO05D000359 7.3e-35 150.6 95 87.4
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 2.1e-21 105.9 118 55.1
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 4.8e-18 94.7 103 56.3
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 9.0e-17 90.5 116 51.7
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 1.3e-15 86.7 103 56.3
Dinv39056 Davidia involucrata HOM05D005851 ORTHO05D007137 5.4e-14 81.3 127 48.0
FAN18G0436 Fragaria x ananassa HOM05D005851 ORTHO05D007137 7.1e-14 80.9 104 52.9
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 2.1e-13 79.3 104 51.9
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 2.7e-13 79.0 91 54.9
Nn1g01189 Nelumbo nucifera HOM05D005851 ORTHO05D007137 4.6e-13 78.2 116 43.1
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 6.0e-13 77.8 110 51.8
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 7.9e-13 77.4 104 54.8
Prupe.5G082400 Prunus persica HOM05D005851 ORTHO05D007137 2.3e-12 75.9 121 45.5
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 3.9e-12 75.1 109 52.3
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 5.1e-12 74.7 113 50.4
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 6.7e-12 74.3 70 61.4
Duzib205G1229 Durio zibethinus HOM05D005851 ORTHO05D007137 8.7e-12 73.9 113 46.0
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 8.7e-12 73.9 115 49.6
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 8.7e-12 73.9 96 51.0
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 1.1e-11 73.6 109 48.6
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 1.9e-11 72.8 61 67.2
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 3.3e-11 72.0 117 48.7
Gohir.D12G225000 Gossypium hirsutum HOM05D005851 ORTHO05D007137 5.6e-11 71.2 111 44.1
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 5.6e-11 71.2 94 46.8
Gorai.008G241100 Gossypium raimondii HOM05D005851 ORTHO05D007137 7.4e-11 70.9 65 58.5
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 1.6e-10 69.7 104 51.0
Sc01g0009080 Simmondsia chinensis HOM05D005851 ORTHO05D007137 1.6e-10 69.7 61 62.3
Hund14676 Selenicereus undatus HOM05D005851 ORTHO05D007137 2.1e-10 69.3 107 48.6
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 4.8e-10 68.2 108 47.2
Lj2C204G6 Lonicera japonica HOM05D005851 ORTHO05D007137 6.2e-10 67.8 109 46.8
Gohir.A12G222500 Gossypium hirsutum HOM05D005851 ORTHO05D007137 1.1e-09 67.0 111 43.2
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 1.1e-09 67.0 108 44.4
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 1.4e-09 66.6 122 44.3
Manes.02G031801 Manihot esculenta HOM05D005851 ORTHO05D007137 5.3e-09 64.7 111 43.2
Sed0022049 Sechium edule HOM05D005851 ORTHO05D007137 5.3e-09 64.7 110 42.7
Thecc.03G264400 Theobroma cacao HOM05D005851 ORTHO05D007137 5.3e-09 64.7 113 42.5
ECA233G5981 Erigeron canadensis HOM05D005851 ORTHO05D007137 6.9e-09 64.3 67 61.2
COL.COLO4_23837 Corchorus olitorius HOM05D005851 ORTHO05D007137 9.0e-09 63.9 93 50.5
Oeu064711.1 Olea europaea HOM05D005851 ORTHO05D007137 9.0e-09 63.9 101 45.5
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 2.6e-08 62.4 113 42.5
Aqoxy5G03942 Aquilegia oxysepala HOM05D001344 ORTHO05D002590 5.8e-08 61.2 65 55.4
AUR62017360 Chenopodium quinoa HOM05D005851 ORTHO05D007137 5.8e-08 61.2 108 42.6
Lsat_1_v5_gn_6_10241 Lactuca sativa HOM05D005851 ORTHO05D007137 9.9e-08 60.5 66 56.1
AUR62010535 Chenopodium quinoa HOM05D005851 ORTHO05D007137 1.7e-07 59.7 108 42.6
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 1.7e-07 59.7 99 45.5
ClCG00G004660 Citrullus lanatus HOM05D005851 ORTHO05D007137 2.2e-07 59.3 111 41.4
THA.LOC104814025 Tarenaya hassleriana HOM05D005851 ORTHO05D007137 2.2e-07 59.3 72 50.0
EL10Ac5g12653 Beta vulgaris HOM05D005851 ORTHO05D007137 2.9e-07 58.9 61 59.0
DCAR_000876 Daucus carota HOM05D005851 ORTHO05D007137 3.8e-07 58.5 102 48.0
Aa31LG6G4910 Aethionema arabicum HOM05D000943 ORTHO05D002475 4.9e-07 58.2 99 43.4
BcaC09g51070 Brassica carinata HOM05D005851 ORTHO05D007137 4.9e-07 58.2 66 53.0
BcaC09g51071 Brassica carinata HOM05D005851 ORTHO05D007137 4.9e-07 58.2 66 53.0
C01p17300 Brassica napus HOM05D005851 ORTHO05D007137 4.9e-07 58.2 66 53.0
ClCG00G000050 Citrullus lanatus HOM05D005851 ORTHO05D007137 6.4e-07 57.8 113 41.6
ClCG00G005270 Citrullus lanatus HOM05D005851 ORTHO05D007137 6.4e-07 57.8 113 41.6
ClCG10G003300 Citrullus lanatus HOM05D005851 ORTHO05D007137 6.4e-07 57.8 113 41.6
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 6.4e-07 57.8 89 48.3
PSO782G0540 Papaver somniferum HOM05D005851 ORTHO05D007137 6.4e-07 57.8 64 56.2
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 8.4e-07 57.4 89 51.7
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 8.4e-07 57.4 98 49.0
BolC1t01669H Brassica oleracea HOM05D005851 ORTHO05D007137 1.4e-06 56.6 66 51.5
Migut.E01010 Erythranthe guttata HOM05D005851 ORTHO05D007137 1.4e-06 56.6 69 52.2
AT4G22830 Arabidopsis thaliana HOM05D005851 ORTHO05D007137 2.4e-06 55.8 102 38.2
Thhalv10026321m.g Eutrema salsugineum HOM05D005851 ORTHO05D007137 3.2e-06 55.5 93 40.9
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 4.2e-06 55.1 70 60.0
A01p14080 Brassica napus HOM05D005851 ORTHO05D007137 5.5e-06 54.7 66 50.0
BraA01t01356Z Brassica rapa HOM05D005851 ORTHO05D007137 5.5e-06 54.7 66 50.0
Eucgr.E00492 Eucalyptus grandis HOM05D005851 ORTHO05D007137 5.5e-06 54.7 54 59.3


User provided reference genes

Program Settings