Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020067 Carpinus fangiana HOM05D001186 ORTHO05D000971 4.1e-63 244.6 126 100.0
Haze_20128 Corylus avellana HOM05D001186 ORTHO05D000971 4.4e-41 171.4 129 76.7
CiPaw.09G024300 Carya illinoinensis HOM05D001186 ORTHO05D000971 2.9e-16 89.0 140 45.7
Cfa020066 Carpinus fangiana HOM05D001186 ORTHO05D043666 4.2e-15 85.1 112 53.6
CiPaw.10G021400 Carya illinoinensis HOM05D001186 ORTHO05D000971 1.1e-12 77.0 93 51.6
Ciclev10013749m.g Citrus clementina HOM05D001186 ORTHO05D000971 1.2e-09 67.0 74 51.4
QL06p036159 Quercus lobata HOM05D001186 ORTHO05D000971 3.4e-09 65.5 161 34.8
QL07p026339 Quercus lobata HOM05D001186 ORTHO05D000971 3.4e-09 65.5 161 34.8
Thecc.05G110300 Theobroma cacao HOM05D001186 ORTHO05D000971 4.5e-09 65.1 91 40.7
Oeu037616.1 Olea europaea HOM05D001186 ORTHO05D000971 2.2e-08 62.8 81 43.2
Sed0014716 Sechium edule HOM05D001186 ORTHO05D000971 3.8e-08 62.0 83 44.6
FAN02G0442 Fragaria x ananassa HOM05D001186 ORTHO05D000971 4.9e-08 61.6 87 43.7
FAN05G4110 Fragaria x ananassa HOM05D001186 ORTHO05D000971 6.4e-08 61.2 88 43.2
FAN09G1764 Fragaria x ananassa HOM05D004834 ORTHO05D006247 6.4e-08 61.2 88 43.2
Manes.08G037400 Manihot esculenta HOM05D001186 ORTHO05D000971 6.4e-08 61.2 90 46.7
Haze_20129 Corylus avellana HOM05D001186 ORTHO05D000971 8.4e-08 60.8 77 54.5
FAN05G1048 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.1e-07 60.5 88 43.2
Oeu032976.1 Olea europaea HOM05D001186 ORTHO05D000971 1.1e-07 60.5 81 44.4
TPR.G33348 Trifolium pratense HOM05D000033 ORTHO05D001999 1.1e-07 60.5 79 46.8
COL.COLO4_29493 Corchorus olitorius HOM05D001186 ORTHO05D000971 1.4e-07 60.1 84 41.7
FvH4_6g21030 Fragaria vesca HOM05D001186 ORTHO05D000971 1.4e-07 60.1 88 42.0
FAN14G0712 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.4e-07 60.1 88 42.0
Glyma.03G204900 Glycine max HOM05D001186 ORTHO05D000971 2.4e-07 59.3 100 37.0
Actinidia15150 Actinidia chinensis HOM05D001186 ORTHO05D000971 3.2e-07 58.9 78 42.3
Glyma.19G202300 Glycine max HOM05D001186 ORTHO05D000971 4.2e-07 58.5 98 38.8
ClCG08G006550 Citrullus lanatus HOM05D001186 ORTHO05D000971 5.5e-07 58.2 71 46.5
Duzib128G1674 Durio zibethinus HOM05D001186 ORTHO05D000971 7.1e-07 57.8 78 43.6
Medtr1g028910 Medicago truncatula HOM05D001186 ORTHO05D000971 7.1e-07 57.8 76 42.1
Phvul.008G159700 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 7.1e-07 57.8 76 43.4
CANSAT64G0006 Cannabis sativa HOM05D001186 ORTHO05D000971 9.3e-07 57.4 62 46.8
Potri.006G199300 Populus trichocarpa HOM05D001186 ORTHO05D000971 1.2e-06 57.0 101 41.6
TWI60G0870 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 1.2e-06 57.0 77 42.9
COL.COLO4_36019 Corchorus olitorius HOM05D001186 ORTHO05D000971 1.6e-06 56.6 83 41.0
SalBow7G3795 Salvia bowleyana HOM05D001186 ORTHO05D000971 2.1e-06 56.2 65 46.2
ClCG10G017960 Citrullus lanatus HOM05D001186 ORTHO05D000971 2.7e-06 55.8 102 36.3
Gohir.D01G189650 Gossypium hirsutum HOM05D001186 ORTHO05D000971 2.7e-06 55.8 112 35.7
Gohir.D07G211466 Gossypium hirsutum HOM05D001186 ORTHO05D000971 2.7e-06 55.8 112 35.7
Gorai.002G233400 Gossypium raimondii HOM05D001186 ORTHO05D000971 2.7e-06 55.8 112 35.7
Oeu046011.1 Olea europaea HOM05D001186 ORTHO05D000971 2.7e-06 55.8 85 41.2
CsaV3_3G038330 Cucumis sativus L. HOM05D001186 ORTHO05D000971 3.5e-06 55.5 77 40.3
DCAR_014416 Daucus carota HOM05D001186 ORTHO05D000971 3.5e-06 55.5 81 42.0
DCAR_014417 Daucus carota HOM05D001186 ORTHO05D000971 3.5e-06 55.5 81 42.0
Dinv25835 Davidia involucrata HOM05D001186 ORTHO05D000971 3.5e-06 55.5 83 43.4
HanXRQChr02g0037451 Helianthus annuus HOM05D001186 ORTHO05D000971 3.5e-06 55.5 80 41.2
Sed0010828 Sechium edule HOM05D001186 ORTHO05D000971 3.5e-06 55.5 101 34.7
Atru.chr8.1283 Acer truncatum HOM05D001186 ORTHO05D000971 4.6e-06 55.1 71 38.0
Oeu014479.1 Olea europaea HOM05D001186 ORTHO05D000971 4.6e-06 55.1 79 39.2
CiPaw.15G019500 Carya illinoinensis HOM05D001186 ORTHO05D000971 6.0e-06 54.7 68 47.1
Peaxi162Scf00263g00083 Petunia axillaris HOM05D001186 ORTHO05D000971 6.0e-06 54.7 81 40.7
CsaV3_6G030890 Cucumis sativus L. HOM05D001186 ORTHO05D000971 7.9e-06 54.3 70 41.4
Duzib093G1352 Durio zibethinus HOM05D001186 ORTHO05D000971 7.9e-06 54.3 92 39.1
Gorai.002G154000 Gossypium raimondii HOM05D001186 ORTHO05D000971 7.9e-06 54.3 96 38.5
Potri.002G070600 Populus trichocarpa HOM05D001186 ORTHO05D000971 7.9e-06 54.3 88 35.2
Potri.005G057800 Populus trichocarpa HOM05D001186 ORTHO05D000971 7.9e-06 54.3 57 50.9
TAR381G0526 Trochodendron aralioides HOM05D001186 ORTHO05D000971 7.9e-06 54.3 92 38.0


User provided reference genes

Program Settings